RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 ATMINO43313 823 aaPredicted RBP11.69□□□□□ -0.54
SSR3-204ENST00000467733 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
SSR3-204ENST00000467733 C7P10643 843 aa11.68□□□□□ -0.54
SSR3-204ENST00000467733 OTUD5Q96G74 571 aa11.68□□□□□ -0.54
SSR3-204ENST00000467733 METRNQ9UJH8 293 aa11.68□□□□□ -0.54
SSR3-204ENST00000467733 PLCD3Q8N3E9 789 aa11.67□□□□□ -0.54
SSR3-204ENST00000467733 KIF12Q96FN5 646 aa11.67□□□□□ -0.54
SSR3-204ENST00000467733 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
SSR3-204ENST00000467733 POTEB2H3BUK9 544 aa11.65□□□□□ -0.54
SSR3-204ENST00000467733 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
SSR3-204ENST00000467733 ATN1P54259 1190 aaPredicted RBP11.59□□□□□ -0.55
SSR3-204ENST00000467733 MAP3K13O43283 966 aa11.58□□□□□ -0.56
SSR3-204ENST00000467733 TIE1P35590 1138 aa11.58□□□□□ -0.56
SSR3-204ENST00000467733 MAMSTRQ6ZN01 415 aa11.58□□□□□ -0.56
SSR3-204ENST00000467733 FKBP8Q14318 412 aa11.57□□□□□ -0.56
SSR3-204ENST00000467733 BMP2KQ9NSY1 1161 aaPredicted RBP11.56□□□□□ -0.56
SSR3-204ENST00000467733 SGIP1Q9BQI5 828 aa11.55□□□□□ -0.56
SSR3-204ENST00000467733 NUBP1P53384 320 aa11.51□□□□□ -0.57
SSR3-204ENST00000467733 FAM212AQ96EL1 285 aa11.51□□□□□ -0.57
SSR3-204ENST00000467733 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
SSR3-204ENST00000467733 SCUBE2Q9NQ36 999 aa11.5□□□□□ -0.57
SSR3-204ENST00000467733 PCDHB13Q9Y5F0 798 aa11.49□□□□□ -0.57
SSR3-204ENST00000467733 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
SSR3-204ENST00000467733 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
SSR3-204ENST00000467733 FBXO3Q9UK99 471 aa11.46□□□□□ -0.57
SSR3-204ENST00000467733 POTEMA6NI47 508 aa11.43□□□□□ -0.58
SSR3-204ENST00000467733 IER5LQ5T953 404 aa11.43□□□□□ -0.58
SSR3-204ENST00000467733 SEC24BO95487 1268 aa11.42□□□□□ -0.58
SSR3-204ENST00000467733 POTEFA5A3E0 1075 aa11.41□□□□□ -0.58
SSR3-204ENST00000467733 PLSCR2Q9NRY7 297 aa11.41□□□□□ -0.58
SSR3-204ENST00000467733 TRIM35Q9UPQ4 493 aa11.41□□□□□ -0.58
SSR3-204ENST00000467733 POTEGQ6S5H5 508 aa11.4□□□□□ -0.58
SSR3-204ENST00000467733 IFNL1Q8IU54 200 aa11.39□□□□□ -0.59
SSR3-204ENST00000467733 COLQQ9Y215 455 aaPredicted RBP11.36□□□□□ -0.59
SSR3-204ENST00000467733 TMEM106CQ9BVX2 250 aa11.35□□□□□ -0.59
SSR3-204ENST00000467733 DCAF8Q5TAQ9 597 aa11.33□□□□□ -0.6
SSR3-204ENST00000467733 PCDH10Q9P2E7 1040 aa11.33□□□□□ -0.6
SSR3-204ENST00000467733 PYGBP11216 843 aa11.28□□□□□ -0.6
SSR3-204ENST00000467733 PLCG2P16885 1265 aa11.28□□□□□ -0.6
SSR3-204ENST00000467733 FAM163AQ96GL9 167 aaPredicted RBP11.28□□□□□ -0.6
SSR3-204ENST00000467733 VASPP50552 380 aaPredicted RBP11.26□□□□□ -0.61
SSR3-204ENST00000467733 GSE1Q14687 1217 aa11.25□□□□□ -0.61
SSR3-204ENST00000467733 LCE2DQ5TA82 110 aaPredicted RBP11.25□□□□□ -0.61
SSR3-204ENST00000467733 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
SSR3-204ENST00000467733 IRX5P78411 483 aaPredicted RBP11.23□□□□□ -0.61
SSR3-204ENST00000467733 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.61
SSR3-204ENST00000467733 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
SSR3-204ENST00000467733 PCDHB8Q9UN66 801 aa11.19□□□□□ -0.62
SSR3-204ENST00000467733 SLAIN1Q8ND83 568 aa11.18□□□□□ -0.62
SSR3-204ENST00000467733 CHRM1P11229 460 aaPredicted RBP11.14□□□□□ -0.63
SSR3-204ENST00000467733 GOLGA2Q08379 1002 aa11.12□□□□□ -0.63
SSR3-204ENST00000467733 MKRN3Q13064 507 aaKnown RBP11.09□□□□□ -0.63
SSR3-204ENST00000467733 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.09□□□□□ -0.63
SSR3-204ENST00000467733 SNPHO15079 494 aa11.06□□□□□ -0.64
SSR3-204ENST00000467733 SPOCK2Q92563 424 aa11.06□□□□□ -0.64
SSR3-204ENST00000467733 ST18O60284 1047 aa11.05□□□□□ -0.64
SSR3-204ENST00000467733 PSEN1P49768 467 aa11.05□□□□□ -0.64
SSR3-204ENST00000467733 PDCD7Q8N8D1 485 aaKnown RBP11.04□□□□□ -0.64
SSR3-204ENST00000467733 TMEM121BQ9BXQ6 578 aaPredicted RBP11.04□□□□□ -0.64
SSR3-204ENST00000467733 PDAP1Q13442 181 aaKnown RBP11.03□□□□□ -0.64
SSR3-204ENST00000467733 CDAN1Q8IWY9 1227 aa11.03□□□□□ -0.64
SSR3-204ENST00000467733 L3MBTL3Q96JM7 780 aaPredicted RBP11.03□□□□□ -0.64
SSR3-204ENST00000467733 C3orf67Q6ZVT6 689 aa11.02□□□□□ -0.65
SSR3-204ENST00000467733 IFNLR1Q8IU57 520 aaPredicted RBP11.01□□□□□ -0.65
SSR3-204ENST00000467733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11□□□□□ -0.65
SSR3-204ENST00000467733 CIZ1Q9ULV3 898 aaPredicted RBP11□□□□□ -0.65
SSR3-204ENST00000467733 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
SSR3-204ENST00000467733 TRIM41Q8WV44 630 aa10.94□□□□□ -0.66
SSR3-204ENST00000467733 CABP2Q9NPB3 220 aa10.91□□□□□ -0.66
SSR3-204ENST00000467733 G3V3G9 751 aa10.89□□□□□ -0.67
SSR3-204ENST00000467733 MARVELD3Q96A59 401 aa10.84□□□□□ -0.67
SSR3-204ENST00000467733 BOLA1Q9Y3E2 137 aa10.84□□□□□ -0.67
SSR3-204ENST00000467733 EMP3P54852 163 aa10.83□□□□□ -0.68
SSR3-204ENST00000467733 DPY19L2Q6NUT2 758 aa10.82□□□□□ -0.68
SSR3-204ENST00000467733 SPNS2Q8IVW8 549 aa10.75□□□□□ -0.69
SSR3-204ENST00000467733 EFCAB3Q8N7B9 438 aa10.75□□□□□ -0.69
SSR3-204ENST00000467733 RIOK3O14730 519 aaKnown RBP10.73□□□□□ -0.69
SSR3-204ENST00000467733 MMRN1Q13201 1228 aa10.73□□□□□ -0.69
SSR3-204ENST00000467733 HS3ST6Q96QI5 342 aa10.73□□□□□ -0.69
SSR3-204ENST00000467733 NISCHQ9Y2I1 1504 aa10.72□□□□□ -0.69
SSR3-204ENST00000467733 FAM205CA6NFA0 338 aa10.71□□□□□ -0.69
SSR3-204ENST00000467733 DOK7Q18PE1 504 aa10.71□□□□□ -0.69
SSR3-204ENST00000467733 ZNF710Q8N1W2 664 aa10.71□□□□□ -0.69
SSR3-204ENST00000467733 VGFO15240 615 aaPredicted RBP10.7□□□□□ -0.7
SSR3-204ENST00000467733 SOX12O15370 315 aa10.7□□□□□ -0.7
SSR3-204ENST00000467733 HOXB3P14651 431 aaPredicted RBP10.7□□□□□ -0.7
SSR3-204ENST00000467733 RIMBP2O15034 1052 aa10.68□□□□□ -0.7
SSR3-204ENST00000467733 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.66□□□□□ -0.7
SSR3-204ENST00000467733 HOXB1P14653 301 aaPredicted RBP10.66□□□□□ -0.7
SSR3-204ENST00000467733 MICALL2Q8IY33 904 aa10.66□□□□□ -0.7
SSR3-204ENST00000467733 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
SSR3-204ENST00000467733 ZFP91Q96JP5 570 aaPredicted RBP10.66□□□□□ -0.7
SSR3-204ENST00000467733 KRTAP3-3Q9BYR6 98 aa10.65□□□□□ -0.7
SSR3-204ENST00000467733 KRTAP3-2Q9BYR7 98 aa10.65□□□□□ -0.7
SSR3-204ENST00000467733 TAOK2Q9UL54 1235 aa10.65□□□□□ -0.7
SSR3-204ENST00000467733 POTEB3A0JP26 581 aa10.64□□□□□ -0.71
SSR3-204ENST00000467733 POTEBQ6S5H4 581 aa10.64□□□□□ -0.71
SSR3-204ENST00000467733 ZSWIM6Q9HCJ5 1215 aa10.61□□□□□ -0.71
SSR3-204ENST00000467733 ERBB3P21860 1342 aa10.59□□□□□ -0.71
SSR3-204ENST00000467733 MS4A4AQ96JQ5 239 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms