RNA–Protein interactions for RNA: ENST00000467058.1

LRPPRC-207, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 3

Gene LRPPRC, Length 557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-207ENST00000467058 NKX1-1Q15270 411 aaPredicted RBP12.19□□□□□ -0.46
LRPPRC-207ENST00000467058 GSE1Q14687 1217 aa12.18□□□□□ -0.46
LRPPRC-207ENST00000467058 GTPBP6O43824 516 aaPredicted RBP12.16□□□□□ -0.46
LRPPRC-207ENST00000467058 TIMELESSQ9UNS1 1208 aa12.16□□□□□ -0.46
LRPPRC-207ENST00000467058 RIOK3O14730 519 aaKnown RBP12.11□□□□□ -0.47
LRPPRC-207ENST00000467058 NUBP1P53384 320 aa12.11□□□□□ -0.47
LRPPRC-207ENST00000467058 TULP1O00294 542 aaPredicted RBP12.1□□□□□ -0.47
LRPPRC-207ENST00000467058 GTF3C3Q9Y5Q9 886 aa12.1□□□□□ -0.47
LRPPRC-207ENST00000467058 ERICH6Q7L0X2 663 aa12.04□□□□□ -0.48
LRPPRC-207ENST00000467058 VGFO15240 615 aaPredicted RBP12.02□□□□□ -0.49
LRPPRC-207ENST00000467058 SGIP1Q9BQI5 828 aa12.02□□□□□ -0.49
LRPPRC-207ENST00000467058 STK25O00506 426 aa12□□□□□ -0.49
LRPPRC-207ENST00000467058 TMEM132AQ24JP5 1023 aa12□□□□□ -0.49
LRPPRC-207ENST00000467058 CHRM1P11229 460 aaPredicted RBP11.99□□□□□ -0.49
LRPPRC-207ENST00000467058 DCAF8Q5TAQ9 597 aa11.99□□□□□ -0.49
LRPPRC-207ENST00000467058 RYDENQ9NUL5 291 aaKnown RBP11.97□□□□□ -0.49
LRPPRC-207ENST00000467058 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
LRPPRC-207ENST00000467058 ARXQ96QS3 562 aa11.92□□□□□ -0.5
LRPPRC-207ENST00000467058 P3H3Q8IVL6 736 aa11.91□□□□□ -0.5
LRPPRC-207ENST00000467058 BCL11BQ9C0K0 894 aaPredicted RBP11.89□□□□□ -0.51
LRPPRC-207ENST00000467058 MNX1P50219 401 aaPredicted RBP11.88□□□□□ -0.51
LRPPRC-207ENST00000467058 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.87□□□□□ -0.51
LRPPRC-207ENST00000467058 ZFP91Q96JP5 570 aaPredicted RBP11.87□□□□□ -0.51
LRPPRC-207ENST00000467058 STK24Q9Y6E0 443 aa11.87□□□□□ -0.51
LRPPRC-207ENST00000467058 CREBZFQ9NS37 354 aa11.86□□□□□ -0.51
LRPPRC-207ENST00000467058 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
LRPPRC-207ENST00000467058 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
LRPPRC-207ENST00000467058 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.8□□□□□ -0.52
LRPPRC-207ENST00000467058 LMOD2Q6P5Q4 547 aa11.78□□□□□ -0.52
LRPPRC-207ENST00000467058 KCNV2Q8TDN2 545 aa11.78□□□□□ -0.52
LRPPRC-207ENST00000467058 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
LRPPRC-207ENST00000467058 DAXXQ9UER7 740 aaPredicted RBP11.74□□□□□ -0.53
LRPPRC-207ENST00000467058 PRR29P0C7W0 189 aa11.73□□□□□ -0.53
LRPPRC-207ENST00000467058 PYGBP11216 843 aa11.73□□□□□ -0.53
LRPPRC-207ENST00000467058 C14orf37Q86TY3 774 aa11.73□□□□□ -0.53
LRPPRC-207ENST00000467058 WDR70Q9NW82 654 aa11.72□□□□□ -0.53
LRPPRC-207ENST00000467058 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
LRPPRC-207ENST00000467058 BRPF1P55201 1214 aaPredicted RBP11.67□□□□□ -0.54
LRPPRC-207ENST00000467058 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
LRPPRC-207ENST00000467058 HOMEZQ8IX15 550 aa11.65□□□□□ -0.54
LRPPRC-207ENST00000467058 RBM42Q9BTD8 480 aaKnown RBP11.64□□□□□ -0.55
LRPPRC-207ENST00000467058 ZNF467Q7Z7K2 595 aaPredicted RBP11.63□□□□□ -0.55
LRPPRC-207ENST00000467058 ARHGEF1Q92888 912 aaKnown RBP11.61□□□□□ -0.55
LRPPRC-207ENST00000467058 ZC3H15Q8WU90 426 aaKnown RBP11.6□□□□□ -0.55
LRPPRC-207ENST00000467058 PDAP1Q13442 181 aaKnown RBP11.59□□□□□ -0.55
LRPPRC-207ENST00000467058 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
LRPPRC-207ENST00000467058 MFRPQ9BY79 579 aa11.57□□□□□ -0.56
LRPPRC-207ENST00000467058 TESPA1A2RU30 521 aaPredicted RBP11.54□□□□□ -0.56
LRPPRC-207ENST00000467058 NEUROD2Q15784 382 aa11.51□□□□□ -0.57
LRPPRC-207ENST00000467058 E2F4Q16254 413 aa11.51□□□□□ -0.57
LRPPRC-207ENST00000467058 SLC24A3Q9HC58 644 aa11.49□□□□□ -0.57
LRPPRC-207ENST00000467058 SEMA3EO15041 775 aa11.48□□□□□ -0.57
LRPPRC-207ENST00000467058 PSEN1P49768 467 aa11.47□□□□□ -0.57
LRPPRC-207ENST00000467058 PCDHB8Q9UN66 801 aa11.47□□□□□ -0.57
LRPPRC-207ENST00000467058 PCDHB13Q9Y5F0 798 aa11.47□□□□□ -0.57
LRPPRC-207ENST00000467058 PPP1R37O75864 691 aa11.46□□□□□ -0.57
LRPPRC-207ENST00000467058 ZNF579Q8NAF0 562 aaKnown RBP11.46□□□□□ -0.57
LRPPRC-207ENST00000467058 FBXO22Q8NEZ5 403 aa11.45□□□□□ -0.58
LRPPRC-207ENST00000467058 TSPYL2Q9H2G4 693 aaPredicted RBP11.45□□□□□ -0.58
LRPPRC-207ENST00000467058 PITPNM1O00562 1244 aa11.44□□□□□ -0.58
LRPPRC-207ENST00000467058 ZMYND10O75800 440 aa11.44□□□□□ -0.58
LRPPRC-207ENST00000467058 POTEHQ6S545 545 aa11.44□□□□□ -0.58
LRPPRC-207ENST00000467058 NLRP6P59044 892 aa11.41□□□□□ -0.58
LRPPRC-207ENST00000467058 ARIH1Q9Y4X5 557 aaPredicted RBP11.4□□□□□ -0.58
LRPPRC-207ENST00000467058 CCDC61Q9Y6R9 512 aa11.4□□□□□ -0.58
LRPPRC-207ENST00000467058 SOX12O15370 315 aa11.39□□□□□ -0.59
LRPPRC-207ENST00000467058 SMYD5Q6GMV2 418 aa11.38□□□□□ -0.59
LRPPRC-207ENST00000467058 SUPT5HO00267 1087 aaKnown RBP11.37□□□□□ -0.59
LRPPRC-207ENST00000467058 NCKAP5LQ9HCH0 1330 aa11.36□□□□□ -0.59
LRPPRC-207ENST00000467058 MFSD10Q14728 455 aa11.36□□□□□ -0.59
LRPPRC-207ENST00000467058 BARGINQ6ZT62 677 aa11.36□□□□□ -0.59
LRPPRC-207ENST00000467058 EFCAB3Q8N7B9 438 aa11.36□□□□□ -0.59
LRPPRC-207ENST00000467058 FARP1Q9Y4F1 1045 aaPredicted RBP11.35□□□□□ -0.59
LRPPRC-207ENST00000467058 CHRDL2Q6WN34 429 aa11.34□□□□□ -0.59
LRPPRC-207ENST00000467058 PHF8Q9UPP1 1060 aa11.34□□□□□ -0.59
LRPPRC-207ENST00000467058 CHADLQ6NUI6 762 aa11.32□□□□□ -0.6
LRPPRC-207ENST00000467058 PDE4AP27815 886 aa11.31□□□□□ -0.6
LRPPRC-207ENST00000467058 IFNL1Q8IU54 200 aa11.3□□□□□ -0.6
LRPPRC-207ENST00000467058 CRISPLD2Q9H0B8 497 aa11.3□□□□□ -0.6
LRPPRC-207ENST00000467058 LARP6Q9BRS8 491 aaKnown RBP11.29□□□□□ -0.6
LRPPRC-207ENST00000467058 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
LRPPRC-207ENST00000467058 CAMK2BQ13554 666 aa11.28□□□□□ -0.6
LRPPRC-207ENST00000467058 AK7Q96M32 723 aa11.27□□□□□ -0.61
LRPPRC-207ENST00000467058 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
LRPPRC-207ENST00000467058 MS4A4AQ96JQ5 239 aa11.23□□□□□ -0.61
LRPPRC-207ENST00000467058 MAP3K13O43283 966 aa11.22□□□□□ -0.61
LRPPRC-207ENST00000467058 KIF12Q96FN5 646 aa11.22□□□□□ -0.61
LRPPRC-207ENST00000467058 GPBP1L1Q9HC44 474 aaPredicted RBP11.2□□□□□ -0.62
LRPPRC-207ENST00000467058 RBM26Q5T8P6 1007 aaKnown RBP11.18□□□□□ -0.62
LRPPRC-207ENST00000467058 GPIHBP1Q8IV16 184 aa11.18□□□□□ -0.62
LRPPRC-207ENST00000467058 ZMYND15Q9H091 742 aa11.18□□□□□ -0.62
LRPPRC-207ENST00000467058 MLLT3P42568 568 aaPredicted RBP11.16□□□□□ -0.62
LRPPRC-207ENST00000467058 KDM4CQ9H3R0 1056 aa11.16□□□□□ -0.62
LRPPRC-207ENST00000467058 PAK3O75914 559 aaPredicted RBP11.15□□□□□ -0.62
LRPPRC-207ENST00000467058 TRIM66O15016 1216 aa11.14□□□□□ -0.63
LRPPRC-207ENST00000467058 IL27Q8NEV9 243 aa11.14□□□□□ -0.63
LRPPRC-207ENST00000467058 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
LRPPRC-207ENST00000467058 KRI1Q8N9T8 703 aaKnown RBP11.13□□□□□ -0.63
LRPPRC-207ENST00000467058 RSPH6AQ9H0K4 717 aa11.13□□□□□ -0.63
LRPPRC-207ENST00000467058 PDE4DQ08499 809 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms