RNA–Protein interactions for RNA: ENST00000467018.3

RPL39P38-201, Transcript of ribosomal protein L39 pseudogene 38, humanhuman

BASIC

Gene RPL39P38, Length 153 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P38-201ENST00000467018 CCDC61Q9Y6R9 512 aa9.28□□□□□ -0.92
RPL39P38-201ENST00000467018 TSPYL2Q9H2G4 693 aaPredicted RBP9.27□□□□□ -0.93
RPL39P38-201ENST00000467018 POTEJP0CG39 1038 aa9.26□□□□□ -0.93
RPL39P38-201ENST00000467018 PLSCR2Q9NRY7 297 aa9.26□□□□□ -0.93
RPL39P38-201ENST00000467018 C7P10643 843 aa9.25□□□□□ -0.93
RPL39P38-201ENST00000467018 SLC39A7Q92504 469 aa9.25□□□□□ -0.93
RPL39P38-201ENST00000467018 KIF12Q96FN5 646 aa9.22□□□□□ -0.93
RPL39P38-201ENST00000467018 POTEMA6NI47 508 aa9.21□□□□□ -0.94
RPL39P38-201ENST00000467018 ATN1P54259 1190 aaPredicted RBP9.21□□□□□ -0.94
RPL39P38-201ENST00000467018 TRPC6Q9Y210 931 aa9.18□□□□□ -0.94
RPL39P38-201ENST00000467018 POTEGQ6S5H5 508 aa9.17□□□□□ -0.94
RPL39P38-201ENST00000467018 BMP2KQ9NSY1 1161 aaPredicted RBP9.17□□□□□ -0.94
RPL39P38-201ENST00000467018 RASEFQ8IZ41 740 aa9.16□□□□□ -0.94
RPL39P38-201ENST00000467018 POTEFA5A3E0 1075 aa9.15□□□□□ -0.94
RPL39P38-201ENST00000467018 MAP3K13O43283 966 aa9.15□□□□□ -0.94
RPL39P38-201ENST00000467018 MAMSTRQ6ZN01 415 aa9.14□□□□□ -0.95
RPL39P38-201ENST00000467018 MIER1Q8N108 512 aa9.14□□□□□ -0.95
RPL39P38-201ENST00000467018 PLEKHG5O94827 1062 aa9.12□□□□□ -0.95
RPL39P38-201ENST00000467018 TIE1P35590 1138 aa9.12□□□□□ -0.95
RPL39P38-201ENST00000467018 LCE2DQ5TA82 110 aaPredicted RBP9.12□□□□□ -0.95
RPL39P38-201ENST00000467018 SCUBE2Q9NQ36 999 aa9.09□□□□□ -0.95
RPL39P38-201ENST00000467018 TTLL13PA6NNM8 815 aa9.08□□□□□ -0.96
RPL39P38-201ENST00000467018 PCDH10Q9P2E7 1040 aa9.05□□□□□ -0.96
RPL39P38-201ENST00000467018 COLQQ9Y215 455 aaPredicted RBP9.05□□□□□ -0.96
RPL39P38-201ENST00000467018 NUBP1P53384 320 aa9.04□□□□□ -0.96
RPL39P38-201ENST00000467018 PLCD3Q8N3E9 789 aa9.04□□□□□ -0.96
RPL39P38-201ENST00000467018 SGIP1Q9BQI5 828 aa9.04□□□□□ -0.96
RPL39P38-201ENST00000467018 FAM163AQ96GL9 167 aaPredicted RBP9.02□□□□□ -0.97
RPL39P38-201ENST00000467018 TRIM35Q9UPQ4 493 aa9.01□□□□□ -0.97
RPL39P38-201ENST00000467018 PCDHB13Q9Y5F0 798 aa9.01□□□□□ -0.97
RPL39P38-201ENST00000467018 SEC24BO95487 1268 aa8.99□□□□□ -0.97
RPL39P38-201ENST00000467018 IER5LQ5T953 404 aa8.99□□□□□ -0.97
RPL39P38-201ENST00000467018 ZBTB47Q9UFB7 747 aaPredicted RBP8.99□□□□□ -0.97
RPL39P38-201ENST00000467018 IFNL1Q8IU54 200 aa8.98□□□□□ -0.97
RPL39P38-201ENST00000467018 FAM212AQ96EL1 285 aa8.93□□□□□ -0.98
RPL39P38-201ENST00000467018 TMEM106CQ9BVX2 250 aa8.92□□□□□ -0.98
RPL39P38-201ENST00000467018 FKBP8Q14318 412 aa8.9□□□□□ -0.98
RPL39P38-201ENST00000467018 IRX5P78411 483 aaPredicted RBP8.89□□□□□ -0.99
RPL39P38-201ENST00000467018 SLAIN1Q8ND83 568 aa8.87□□□□□ -0.99
RPL39P38-201ENST00000467018 PLCG2P16885 1265 aa8.86□□□□□ -0.99
RPL39P38-201ENST00000467018 ST18O60284 1047 aa8.84□□□□□ -0.99
RPL39P38-201ENST00000467018 PYGBP11216 843 aa8.84□□□□□ -0.99
RPL39P38-201ENST00000467018 CDAN1Q8IWY9 1227 aa8.84□□□□□ -0.99
RPL39P38-201ENST00000467018 DCAF8Q5TAQ9 597 aa8.82□□□□□ -1
RPL39P38-201ENST00000467018 OCEL1Q9H607 264 aa8.81□□□□□ -1
RPL39P38-201ENST00000467018 PCDHB8Q9UN66 801 aa8.8□□□□□ -1
RPL39P38-201ENST00000467018 FBXO3Q9UK99 471 aa8.77□□□□□ -1.01
RPL39P38-201ENST00000467018 PDCD7Q8N8D1 485 aaKnown RBP8.73□□□□□ -1.01
RPL39P38-201ENST00000467018 TMEM121BQ9BXQ6 578 aaPredicted RBP8.73□□□□□ -1.01
RPL39P38-201ENST00000467018 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.72□□□□□ -1.01
RPL39P38-201ENST00000467018 VASPP50552 380 aaPredicted RBP8.7□□□□□ -1.02
RPL39P38-201ENST00000467018 ZNF467Q7Z7K2 595 aaPredicted RBP8.7□□□□□ -1.02
RPL39P38-201ENST00000467018 SNPHO15079 494 aa8.69□□□□□ -1.02
RPL39P38-201ENST00000467018 GSE1Q14687 1217 aa8.69□□□□□ -1.02
RPL39P38-201ENST00000467018 CHRM1P11229 460 aaPredicted RBP8.68□□□□□ -1.02
RPL39P38-201ENST00000467018 KLHL34Q8N239 644 aa8.66□□□□□ -1.02
RPL39P38-201ENST00000467018 MARVELD3Q96A59 401 aa8.66□□□□□ -1.02
RPL39P38-201ENST00000467018 MKRN3Q13064 507 aaKnown RBP8.65□□□□□ -1.02
RPL39P38-201ENST00000467018 MMRN1Q13201 1228 aa8.64□□□□□ -1.03
RPL39P38-201ENST00000467018 ILDR1Q86SU0 546 aaPredicted RBP8.64□□□□□ -1.03
RPL39P38-201ENST00000467018 SPNS2Q8IVW8 549 aa8.64□□□□□ -1.03
RPL39P38-201ENST00000467018 PSEN1P49768 467 aa8.63□□□□□ -1.03
RPL39P38-201ENST00000467018 GOLGA2Q08379 1002 aa8.63□□□□□ -1.03
RPL39P38-201ENST00000467018 C3orf67Q6ZVT6 689 aa8.63□□□□□ -1.03
RPL39P38-201ENST00000467018 L3MBTL3Q96JM7 780 aaPredicted RBP8.62□□□□□ -1.03
RPL39P38-201ENST00000467018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.62□□□□□ -1.03
RPL39P38-201ENST00000467018 POTEB3A0JP26 581 aa8.57□□□□□ -1.04
RPL39P38-201ENST00000467018 PDAP1Q13442 181 aaKnown RBP8.57□□□□□ -1.04
RPL39P38-201ENST00000467018 POTEBQ6S5H4 581 aa8.57□□□□□ -1.04
RPL39P38-201ENST00000467018 EMP3P54852 163 aa8.56□□□□□ -1.04
RPL39P38-201ENST00000467018 DPY19L2Q6NUT2 758 aa8.56□□□□□ -1.04
RPL39P38-201ENST00000467018 IFNLR1Q8IU57 520 aaPredicted RBP8.55□□□□□ -1.04
RPL39P38-201ENST00000467018 HS3ST6Q96QI5 342 aa8.54□□□□□ -1.04
RPL39P38-201ENST00000467018 KRTAP3-3Q9BYR6 98 aa8.54□□□□□ -1.04
RPL39P38-201ENST00000467018 KRTAP3-2Q9BYR7 98 aa8.54□□□□□ -1.04
RPL39P38-201ENST00000467018 CABP2Q9NPB3 220 aa8.53□□□□□ -1.04
RPL39P38-201ENST00000467018 SPOCK2Q92563 424 aa8.52□□□□□ -1.05
RPL39P38-201ENST00000467018 FAM205CA6NFA0 338 aa8.51□□□□□ -1.05
RPL39P38-201ENST00000467018 BOLA1Q9Y3E2 137 aa8.51□□□□□ -1.05
RPL39P38-201ENST00000467018 HOXB3P14651 431 aaPredicted RBP8.5□□□□□ -1.05
RPL39P38-201ENST00000467018 CIZ1Q9ULV3 898 aaPredicted RBP8.5□□□□□ -1.05
RPL39P38-201ENST00000467018 G3V3G9 751 aa8.44□□□□□ -1.06
RPL39P38-201ENST00000467018 HOXB1P14653 301 aaPredicted RBP8.43□□□□□ -1.06
RPL39P38-201ENST00000467018 EFCAB3Q8N7B9 438 aa8.42□□□□□ -1.06
RPL39P38-201ENST00000467018 DOK7Q18PE1 504 aa8.39□□□□□ -1.07
RPL39P38-201ENST00000467018 ZNF710Q8N1W2 664 aa8.39□□□□□ -1.07
RPL39P38-201ENST00000467018 TRIM41Q8WV44 630 aa8.38□□□□□ -1.07
RPL39P38-201ENST00000467018 TMEM92Q6UXU6 159 aa8.37□□□□□ -1.07
RPL39P38-201ENST00000467018 ERBB3P21860 1342 aa8.36□□□□□ -1.07
RPL39P38-201ENST00000467018 MICALL2Q8IY33 904 aa8.36□□□□□ -1.07
RPL39P38-201ENST00000467018 RNF25Q96BH1 459 aaPredicted RBP8.34□□□□□ -1.07
RPL39P38-201ENST00000467018 MS4A4AQ96JQ5 239 aa8.34□□□□□ -1.07
RPL39P38-201ENST00000467018 RIMBP2O15034 1052 aa8.33□□□□□ -1.08
RPL39P38-201ENST00000467018 VARS2Q5ST30 1063 aaKnown RBP8.33□□□□□ -1.08
RPL39P38-201ENST00000467018 ZSWIM6Q9HCJ5 1215 aa8.32□□□□□ -1.08
RPL39P38-201ENST00000467018 SOX12O15370 315 aa8.31□□□□□ -1.08
RPL39P38-201ENST00000467018 RIOK3O14730 519 aaKnown RBP8.3□□□□□ -1.08
RPL39P38-201ENST00000467018 GPR153Q6NV75 609 aa8.3□□□□□ -1.08
RPL39P38-201ENST00000467018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.29□□□□□ -1.08
RPL39P38-201ENST00000467018 ZFP91Q96JP5 570 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms