RNA–Protein interactions for RNA: ENST00000465404.2

AMD1-206, Transcript of adenosylmethionine decarboxylase 1, humanhuman

TSL 5

Gene AMD1, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1-206ENST00000465404 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
AMD1-206ENST00000465404 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
AMD1-206ENST00000465404 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
AMD1-206ENST00000465404 CEP164Q9UPV0 1460 aa12.94□□□□□ -0.34
AMD1-206ENST00000465404 CYB5RLQ6IPT4 315 aa12.93□□□□□ -0.34
AMD1-206ENST00000465404 PEG3Q9GZU2 1588 aa12.93□□□□□ -0.34
AMD1-206ENST00000465404 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.36
AMD1-206ENST00000465404 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
AMD1-206ENST00000465404 ARAP1Q96P48 1450 aa12.8□□□□□ -0.36
AMD1-206ENST00000465404 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
AMD1-206ENST00000465404 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
AMD1-206ENST00000465404 SPDYE1Q8NFV5 336 aaPredicted RBP12.76□□□□□ -0.37
AMD1-206ENST00000465404 URB2Q14146 1524 aaKnown RBP12.72□□□□□ -0.37
AMD1-206ENST00000465404 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
AMD1-206ENST00000465404 MROH2BQ7Z745 1585 aa12.72□□□□□ -0.37
AMD1-206ENST00000465404 ILDR1Q86SU0 546 aaPredicted RBP12.71□□□□□ -0.37
AMD1-206ENST00000465404 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.38
AMD1-206ENST00000465404 CHD1O14646 1710 aa12.7□□□□□ -0.38
AMD1-206ENST00000465404 IFT140Q96RY7 1462 aa12.69□□□□□ -0.38
AMD1-206ENST00000465404 ZNF608Q9ULD9 1512 aaPredicted RBP12.67□□□□□ -0.38
AMD1-206ENST00000465404 EIF4G3O43432 1585 aaKnown RBP12.64□□□□□ -0.39
AMD1-206ENST00000465404 CFTRP13569 1480 aa12.64□□□□□ -0.39
AMD1-206ENST00000465404 PRKAR2AP13861 404 aaKnown RBP12.6□□□□□ -0.39
AMD1-206ENST00000465404 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
AMD1-206ENST00000465404 PRDM2Q13029 1718 aa12.57□□□□□ -0.4
AMD1-206ENST00000465404 WIZO95785 1651 aa12.57□□□□□ -0.4
AMD1-206ENST00000465404 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
AMD1-206ENST00000465404 PROM2Q8N271 834 aa12.5□□□□□ -0.41
AMD1-206ENST00000465404 TOPBP1Q92547 1522 aa12.49□□□□□ -0.41
AMD1-206ENST00000465404 AQRO60306 1485 aaKnown RBP eCLIP12.49□□□□□ -0.413e-7■■□□□ 11.6
AMD1-206ENST00000465404 SYNJ1O43426 1573 aa12.48□□□□□ -0.41
AMD1-206ENST00000465404 CLASP1Q7Z460 1538 aa12.48□□□□□ -0.41
AMD1-206ENST00000465404 EVX2Q03828 476 aa12.48□□□□□ -0.41
AMD1-206ENST00000465404 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
AMD1-206ENST00000465404 HAX1O00165 279 aa12.47□□□□□ -0.41
AMD1-206ENST00000465404 GAPVD1Q14C86 1478 aa12.43□□□□□ -0.42
AMD1-206ENST00000465404 TARBP1Q13395 1621 aaKnown RBP12.43□□□□□ -0.42
AMD1-206ENST00000465404 DNMBPQ6XZF7 1577 aa12.42□□□□□ -0.42
AMD1-206ENST00000465404 CHMP7Q8WUX9 453 aaPredicted RBP12.4□□□□□ -0.42
AMD1-206ENST00000465404 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
AMD1-206ENST00000465404 SP7Q8TDD2 431 aaPredicted RBP12.39□□□□□ -0.43
AMD1-206ENST00000465404 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
AMD1-206ENST00000465404 TOP2AP11388 1531 aaKnown RBP12.38□□□□□ -0.43
AMD1-206ENST00000465404 FKBP8Q14318 412 aa12.38□□□□□ -0.43
AMD1-206ENST00000465404 SNAPC4Q5SXM2 1469 aa12.38□□□□□ -0.43
AMD1-206ENST00000465404 C19orf67A6NJJ6 358 aa12.36□□□□□ -0.43
AMD1-206ENST00000465404 KIF13AQ9H1H9 1805 aa12.35□□□□□ -0.43
AMD1-206ENST00000465404 FARP1Q9Y4F1 1045 aaPredicted RBP12.35□□□□□ -0.43
AMD1-206ENST00000465404 MAGI1Q96QZ7 1491 aaPredicted RBP12.34□□□□□ -0.43
AMD1-206ENST00000465404 WDR97A6NE52 1622 aa12.33□□□□□ -0.44
AMD1-206ENST00000465404 KDM4FA0A1W2PPD8 638 aa12.32□□□□□ -0.44
AMD1-206ENST00000465404 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
AMD1-206ENST00000465404 TDRD9Q8NDG6 1382 aaKnown RBP12.3□□□□□ -0.44
AMD1-206ENST00000465404 ERCC6L2Q5T890 1561 aa12.3□□□□□ -0.44
AMD1-206ENST00000465404 SYNJ2O15056 1496 aa12.29□□□□□ -0.44
AMD1-206ENST00000465404 RAD54L2Q9Y4B4 1467 aa12.27□□□□□ -0.45
AMD1-206ENST00000465404 KDM6BO15054 1643 aa12.26□□□□□ -0.45
AMD1-206ENST00000465404 SOGA1O94964 1423 aa12.26□□□□□ -0.45
AMD1-206ENST00000465404 MNX1P50219 401 aaPredicted RBP12.25□□□□□ -0.45
AMD1-206ENST00000465404 GRIN2BQ13224 1484 aa12.25□□□□□ -0.45
AMD1-206ENST00000465404 CD44P16070 742 aaKnown RBP12.21□□□□□ -0.45
AMD1-206ENST00000465404 FBXO41Q8TF61 875 aa12.21□□□□□ -0.45
AMD1-206ENST00000465404 HECW2Q9P2P5 1572 aa12.21□□□□□ -0.46
AMD1-206ENST00000465404 PBRM1Q86U86 1689 aa12.2□□□□□ -0.46
AMD1-206ENST00000465404 FAM69CQ0P6D2 419 aa12.2□□□□□ -0.46
AMD1-206ENST00000465404 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
AMD1-206ENST00000465404 ABCC10Q5T3U5 1492 aa12.16□□□□□ -0.46
AMD1-206ENST00000465404 CEP170Q5SW79 1584 aa12.16□□□□□ -0.46
AMD1-206ENST00000465404 FGD5Q6ZNL6 1462 aa12.15□□□□□ -0.46
AMD1-206ENST00000465404 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
AMD1-206ENST00000465404 ADGRL1O94910 1474 aa12.14□□□□□ -0.47
AMD1-206ENST00000465404 LMTK3Q96Q04 1460 aa12.14□□□□□ -0.47
AMD1-206ENST00000465404 TSPOAP1O95153 1857 aa12.13□□□□□ -0.47
AMD1-206ENST00000465404 DIP2BQ9P265 1576 aa12.13□□□□□ -0.47
AMD1-206ENST00000465404 SUPT5HO00267 1087 aaKnown RBP12.12□□□□□ -0.47
AMD1-206ENST00000465404 GABBR2O75899 941 aa12.12□□□□□ -0.47
AMD1-206ENST00000465404 SHROOM2Q13796 1616 aa12.09□□□□□ -0.47
AMD1-206ENST00000465404 MAPKBP1O60336 1514 aa12.09□□□□□ -0.47
AMD1-206ENST00000465404 GRIN2AQ12879 1464 aa12.08□□□□□ -0.47
AMD1-206ENST00000465404 MIER1Q8N108 512 aa12.08□□□□□ -0.48
AMD1-206ENST00000465404 ZRANB1Q9UGI0 708 aa12.08□□□□□ -0.48
AMD1-206ENST00000465404 NUP160Q12769 1436 aa12.03□□□□□ -0.48
AMD1-206ENST00000465404 ZNF579Q8NAF0 562 aaKnown RBP12.03□□□□□ -0.48
AMD1-206ENST00000465404 ABCA5Q8WWZ7 1642 aa12.02□□□□□ -0.49
AMD1-206ENST00000465404 PRG4Q92954 1404 aaPredicted RBP12.01□□□□□ -0.49
AMD1-206ENST00000465404 CUX1P39880 1505 aa12.01□□□□□ -0.49
AMD1-206ENST00000465404 ADAMTS12P58397 1594 aa12.01□□□□□ -0.49
AMD1-206ENST00000465404 SOCS7O14512 581 aa12□□□□□ -0.49
AMD1-206ENST00000465404 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
AMD1-206ENST00000465404 PHF12Q96QT6 1004 aa12□□□□□ -0.49
AMD1-206ENST00000465404 TOP2BQ02880 1626 aa11.97□□□□□ -0.49
AMD1-206ENST00000465404 ADCY10Q96PN6 1610 aa11.97□□□□□ -0.49
AMD1-206ENST00000465404 ABCA10Q8WWZ4 1543 aa11.96□□□□□ -0.49
AMD1-206ENST00000465404 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
AMD1-206ENST00000465404 RASEFQ8IZ41 740 aa11.95□□□□□ -0.5
AMD1-206ENST00000465404 TSPYL2Q9H2G4 693 aaPredicted RBP11.94□□□□□ -0.5
AMD1-206ENST00000465404 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
AMD1-206ENST00000465404 PAK3O75914 559 aaPredicted RBP11.93□□□□□ -0.5
AMD1-206ENST00000465404 FHAD1B1AJZ9 1412 aa11.93□□□□□ -0.5
AMD1-206ENST00000465404 DISP3Q9P2K9 1392 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms