RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 METRNQ9UJH8 293 aa14.94□□□□□ -0.02
CD46-211ENST00000464082 PROM2Q8N271 834 aa14.93□□□□□ -0.02
CD46-211ENST00000464082 POTEJP0CG39 1038 aa14.92□□□□□ -0.02
CD46-211ENST00000464082 POTEMA6NI47 508 aa14.88□□□□□ -0.03
CD46-211ENST00000464082 SLC39A7Q92504 469 aa14.87□□□□□ -0.03
CD46-211ENST00000464082 CCDC61Q9Y6R9 512 aa14.87□□□□□ -0.03
CD46-211ENST00000464082 C7P10643 843 aa14.86□□□□□ -0.03
CD46-211ENST00000464082 POTEGQ6S5H5 508 aa14.83□□□□□ -0.04
CD46-211ENST00000464082 ATN1P54259 1190 aaPredicted RBP14.81□□□□□ -0.04
CD46-211ENST00000464082 KIF12Q96FN5 646 aa14.8□□□□□ -0.04
CD46-211ENST00000464082 TRPC6Q9Y210 931 aa14.78□□□□□ -0.04
CD46-211ENST00000464082 BMP2KQ9NSY1 1161 aaPredicted RBP14.73□□□□□ -0.05
CD46-211ENST00000464082 MAP3K13O43283 966 aa14.72□□□□□ -0.05
CD46-211ENST00000464082 POTEFA5A3E0 1075 aa14.71□□□□□ -0.05
CD46-211ENST00000464082 RASEFQ8IZ41 740 aa14.71□□□□□ -0.05
CD46-211ENST00000464082 MIER1Q8N108 512 aa14.71□□□□□ -0.05
CD46-211ENST00000464082 MAMSTRQ6ZN01 415 aa14.7□□□□□ -0.06
CD46-211ENST00000464082 LCE2DQ5TA82 110 aaPredicted RBP14.68□□□□□ -0.06
CD46-211ENST00000464082 FAM163AQ96GL9 167 aaPredicted RBP14.63□□□□□ -0.07
CD46-211ENST00000464082 SCUBE2Q9NQ36 999 aa14.63□□□□□ -0.07
CD46-211ENST00000464082 PLEKHG5O94827 1062 aa14.62□□□□□ -0.07
CD46-211ENST00000464082 TIE1P35590 1138 aa14.61□□□□□ -0.07
CD46-211ENST00000464082 COLQQ9Y215 455 aaPredicted RBP14.59□□□□□ -0.07
CD46-211ENST00000464082 TTLL13PA6NNM8 815 aa14.58□□□□□ -0.08
CD46-211ENST00000464082 PCDH10Q9P2E7 1040 aa14.55□□□□□ -0.08
CD46-211ENST00000464082 PLCD3Q8N3E9 789 aa14.52□□□□□ -0.09
CD46-211ENST00000464082 SEC24BO95487 1268 aa14.5□□□□□ -0.09
CD46-211ENST00000464082 NUBP1P53384 320 aa14.48□□□□□ -0.09
CD46-211ENST00000464082 TRIM35Q9UPQ4 493 aa14.48□□□□□ -0.09
CD46-211ENST00000464082 PCDHB13Q9Y5F0 798 aa14.48□□□□□ -0.09
CD46-211ENST00000464082 SGIP1Q9BQI5 828 aa14.43□□□□□ -0.1
CD46-211ENST00000464082 IFNL1Q8IU54 200 aa14.42□□□□□ -0.1
CD46-211ENST00000464082 IER5LQ5T953 404 aa14.4□□□□□ -0.1
CD46-211ENST00000464082 TMEM106CQ9BVX2 250 aa14.35□□□□□ -0.11
CD46-211ENST00000464082 ZBTB47Q9UFB7 747 aaPredicted RBP14.35□□□□□ -0.11
CD46-211ENST00000464082 FAM212AQ96EL1 285 aa14.32□□□□□ -0.12
CD46-211ENST00000464082 SLAIN1Q8ND83 568 aa14.3□□□□□ -0.12
CD46-211ENST00000464082 CDAN1Q8IWY9 1227 aa14.28□□□□□ -0.12
CD46-211ENST00000464082 ST18O60284 1047 aa14.25□□□□□ -0.13
CD46-211ENST00000464082 PLCG2P16885 1265 aa14.25□□□□□ -0.13
CD46-211ENST00000464082 IRX5P78411 483 aaPredicted RBP14.25□□□□□ -0.13
CD46-211ENST00000464082 FKBP8Q14318 412 aa14.25□□□□□ -0.13
CD46-211ENST00000464082 PYGBP11216 843 aa14.22□□□□□ -0.13
CD46-211ENST00000464082 DCAF8Q5TAQ9 597 aa14.19□□□□□ -0.14
CD46-211ENST00000464082 PCDHB8Q9UN66 801 aa14.16□□□□□ -0.14
CD46-211ENST00000464082 OCEL1Q9H607 264 aa14.15□□□□□ -0.14
CD46-211ENST00000464082 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.03□□□□□ -0.16
CD46-211ENST00000464082 MARVELD3Q96A59 401 aa14.01□□□□□ -0.17
CD46-211ENST00000464082 PDCD7Q8N8D1 485 aaKnown RBP13.99□□□□□ -0.17
CD46-211ENST00000464082 TMEM121BQ9BXQ6 578 aaPredicted RBP13.99□□□□□ -0.17
CD46-211ENST00000464082 FBXO3Q9UK99 471 aa13.98□□□□□ -0.17
CD46-211ENST00000464082 SNPHO15079 494 aa13.96□□□□□ -0.17
CD46-211ENST00000464082 SPNS2Q8IVW8 549 aa13.95□□□□□ -0.18
CD46-211ENST00000464082 MMRN1Q13201 1228 aa13.94□□□□□ -0.18
CD46-211ENST00000464082 KLHL34Q8N239 644 aa13.93□□□□□ -0.18
CD46-211ENST00000464082 ZNF467Q7Z7K2 595 aaPredicted RBP13.91□□□□□ -0.18
CD46-211ENST00000464082 MKRN3Q13064 507 aaKnown RBP13.9□□□□□ -0.18
CD46-211ENST00000464082 GSE1Q14687 1217 aa13.9□□□□□ -0.18
CD46-211ENST00000464082 VASPP50552 380 aaPredicted RBP13.89□□□□□ -0.19
CD46-211ENST00000464082 GOLGA2Q08379 1002 aa13.88□□□□□ -0.19
CD46-211ENST00000464082 C3orf67Q6ZVT6 689 aa13.88□□□□□ -0.19
CD46-211ENST00000464082 CHRM1P11229 460 aaPredicted RBP13.86□□□□□ -0.19
CD46-211ENST00000464082 PSEN1P49768 467 aa13.86□□□□□ -0.19
CD46-211ENST00000464082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.196e-11■■□□□ 14
CD46-211ENST00000464082 L3MBTL3Q96JM7 780 aaPredicted RBP13.85□□□□□ -0.19
CD46-211ENST00000464082 POTEB3A0JP26 581 aa13.82□□□□□ -0.2
CD46-211ENST00000464082 POTEBQ6S5H4 581 aa13.82□□□□□ -0.2
CD46-211ENST00000464082 EMP3P54852 163 aa13.81□□□□□ -0.2
CD46-211ENST00000464082 DPY19L2Q6NUT2 758 aa13.8□□□□□ -0.2
CD46-211ENST00000464082 ILDR1Q86SU0 546 aaPredicted RBP13.77□□□□□ -0.21
CD46-211ENST00000464082 FAM205CA6NFA0 338 aa13.75□□□□□ -0.21
CD46-211ENST00000464082 HS3ST6Q96QI5 342 aa13.75□□□□□ -0.21
CD46-211ENST00000464082 KRTAP3-3Q9BYR6 98 aa13.74□□□□□ -0.21
CD46-211ENST00000464082 KRTAP3-2Q9BYR7 98 aa13.74□□□□□ -0.21
CD46-211ENST00000464082 PDAP1Q13442 181 aaKnown RBP13.72□□□□□ -0.21
CD46-211ENST00000464082 CABP2Q9NPB3 220 aa13.7□□□□□ -0.22
CD46-211ENST00000464082 HOXB3P14651 431 aaPredicted RBP13.66□□□□□ -0.22
CD46-211ENST00000464082 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
CD46-211ENST00000464082 CIZ1Q9ULV3 898 aaPredicted RBP13.66□□□□□ -0.22
CD46-211ENST00000464082 BOLA1Q9Y3E2 137 aa13.66□□□□□ -0.22
CD46-211ENST00000464082 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
CD46-211ENST00000464082 G3V3G9 751 aa13.58□□□□□ -0.24
CD46-211ENST00000464082 HOXB1P14653 301 aaPredicted RBP13.53□□□□□ -0.24
CD46-211ENST00000464082 ZNF710Q8N1W2 664 aa13.52□□□□□ -0.25
CD46-211ENST00000464082 EFCAB3Q8N7B9 438 aa13.51□□□□□ -0.25
CD46-211ENST00000464082 ERBB3P21860 1342 aa13.48□□□□□ -0.25
CD46-211ENST00000464082 DOK7Q18PE1 504 aa13.48□□□□□ -0.25
CD46-211ENST00000464082 TMEM92Q6UXU6 159 aa13.45□□□□□ -0.26
CD46-211ENST00000464082 VARS2Q5ST30 1063 aaKnown RBP13.42□□□□□ -0.26
CD46-211ENST00000464082 MICALL2Q8IY33 904 aa13.4□□□□□ -0.26
CD46-211ENST00000464082 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
CD46-211ENST00000464082 MS4A4AQ96JQ5 239 aa13.35□□□□□ -0.27
CD46-211ENST00000464082 NISCHQ9Y2I1 1504 aa13.34□□□□□ -0.27
CD46-211ENST00000464082 RNF166Q96A37 237 aaPredicted RBP13.34□□□□□ -0.27
CD46-211ENST00000464082 GPR153Q6NV75 609 aa13.33□□□□□ -0.28
CD46-211ENST00000464082 TRIM41Q8WV44 630 aa13.33□□□□□ -0.28
CD46-211ENST00000464082 RNF25Q96BH1 459 aaPredicted RBP13.32□□□□□ -0.28
CD46-211ENST00000464082 ZNF687Q8N1G0 1237 aa13.3□□□□□ -0.28
CD46-211ENST00000464082 ZSWIM6Q9HCJ5 1215 aa13.3□□□□□ -0.28
CD46-211ENST00000464082 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms