RNA–Protein interactions for RNA: ENST00000462527.2

EIF3A-202, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

TSL 2

Gene EIF3A, Length 1,192 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-202ENST00000462527 CHGAP10645 457 aaKnown RBP14.02□□□□□ -0.17
EIF3A-202ENST00000462527 AKT1S1Q96B36 256 aa13.97□□□□□ -0.17
EIF3A-202ENST00000462527 SPDYE2BA6NHP3 402 aa13.9□□□□□ -0.18
EIF3A-202ENST00000462527 SPDYE6P0CI01 402 aa13.9□□□□□ -0.18
EIF3A-202ENST00000462527 SPDYE2Q495Y8 402 aa13.9□□□□□ -0.18
EIF3A-202ENST00000462527 TRIM26Q12899 539 aaPredicted RBP13.89□□□□□ -0.19
EIF3A-202ENST00000462527 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
EIF3A-202ENST00000462527 UBTFP17480 764 aaKnown RBP13.85□□□□□ -0.19
EIF3A-202ENST00000462527 POTEHQ6S545 545 aa13.84□□□□□ -0.19
EIF3A-202ENST00000462527 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
EIF3A-202ENST00000462527 ZNF692Q9BU19 519 aaPredicted RBP13.83□□□□□ -0.2
EIF3A-202ENST00000462527 BRPF1P55201 1214 aaPredicted RBP13.78□□□□□ -0.2
EIF3A-202ENST00000462527 SSUH2Q9Y2M2 353 aa13.78□□□□□ -0.2
EIF3A-202ENST00000462527 HS6ST3Q8IZP7 471 aa13.77□□□□□ -0.21
EIF3A-202ENST00000462527 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
EIF3A-202ENST00000462527 HRCP23327 699 aa13.7□□□□□ -0.22
EIF3A-202ENST00000462527 P3H3Q8IVL6 736 aa13.68□□□□□ -0.22
EIF3A-202ENST00000462527 ABCC9O60706 1549 aa13.68□□□□□ -0.22
EIF3A-202ENST00000462527 LMOD2Q6P5Q4 547 aa13.67□□□□□ -0.22
EIF3A-202ENST00000462527 CIZ1Q9ULV3 898 aaPredicted RBP13.67□□□□□ -0.22
EIF3A-202ENST00000462527 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
EIF3A-202ENST00000462527 NEUROD2Q15784 382 aa13.65□□□□□ -0.22
EIF3A-202ENST00000462527 PABPN1Q86U42 306 aaKnown RBP eCLIP13.65□□□□□ -0.22
EIF3A-202ENST00000462527 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
EIF3A-202ENST00000462527 TRIM41Q8WV44 630 aa13.64□□□□□ -0.23
EIF3A-202ENST00000462527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.62□□□□□ -0.23
EIF3A-202ENST00000462527 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
EIF3A-202ENST00000462527 PIP4P2Q8N4L2 257 aa13.6□□□□□ -0.23
EIF3A-202ENST00000462527 ZMYND15Q9H091 742 aa13.59□□□□□ -0.23
EIF3A-202ENST00000462527 RSPH6AQ9H0K4 717 aa13.59□□□□□ -0.23
EIF3A-202ENST00000462527 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
EIF3A-202ENST00000462527 CCDC9Q9Y3X0 531 aaKnown RBP13.56□□□□□ -0.24
EIF3A-202ENST00000462527 GTPBP6O43824 516 aaPredicted RBP13.55□□□□□ -0.24
EIF3A-202ENST00000462527 FXR2P51116 673 aaKnown RBP eCLIP13.54□□□□□ -0.242e-8■■■■□ 22.5
EIF3A-202ENST00000462527 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
EIF3A-202ENST00000462527 ZBTB7CA1YPR0 619 aa13.51□□□□□ -0.25
EIF3A-202ENST00000462527 MIER1Q8N108 512 aa13.49□□□□□ -0.25
EIF3A-202ENST00000462527 NKX1-1Q15270 411 aaPredicted RBP13.48□□□□□ -0.25
EIF3A-202ENST00000462527 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
EIF3A-202ENST00000462527 ARID3AQ99856 593 aa13.43□□□□□ -0.26
EIF3A-202ENST00000462527 RYDENQ9NUL5 291 aaKnown RBP13.43□□□□□ -0.26
EIF3A-202ENST00000462527 PRR29P0C7W0 189 aa13.4□□□□□ -0.26
EIF3A-202ENST00000462527 MYT1Q01538 1121 aa13.4□□□□□ -0.26
EIF3A-202ENST00000462527 WDR70Q9NW82 654 aa13.4□□□□□ -0.26
EIF3A-202ENST00000462527 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
EIF3A-202ENST00000462527 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
EIF3A-202ENST00000462527 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
EIF3A-202ENST00000462527 ZC3H15Q8WU90 426 aaKnown RBP13.39□□□□□ -0.27
EIF3A-202ENST00000462527 SLC24A3Q9HC58 644 aa13.38□□□□□ -0.27
EIF3A-202ENST00000462527 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
EIF3A-202ENST00000462527 TTBK1Q5TCY1 1321 aaPredicted RBP13.37□□□□□ -0.27
EIF3A-202ENST00000462527 KCNV2Q8TDN2 545 aa13.31□□□□□ -0.28
EIF3A-202ENST00000462527 RNF25Q96BH1 459 aaPredicted RBP13.29□□□□□ -0.28
EIF3A-202ENST00000462527 RIOK3O14730 519 aaKnown RBP13.28□□□□□ -0.28
EIF3A-202ENST00000462527 GSE1Q14687 1217 aa13.28□□□□□ -0.28
EIF3A-202ENST00000462527 STK25O00506 426 aa13.27□□□□□ -0.29
EIF3A-202ENST00000462527 HAX1O00165 279 aa13.26□□□□□ -0.29
EIF3A-202ENST00000462527 ZCCHC6Q5VYS8 1495 aaKnown RBP13.25□□□□□ -0.29
EIF3A-202ENST00000462527 EVX2Q03828 476 aa13.21□□□□□ -0.29
EIF3A-202ENST00000462527 VGFO15240 615 aaPredicted RBP13.19□□□□□ -0.3
EIF3A-202ENST00000462527 C1orf115Q9H7X2 142 aa13.18□□□□□ -0.3
EIF3A-202ENST00000462527 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
EIF3A-202ENST00000462527 RB1CC1Q8TDY2 1594 aa13.17□□□□□ -0.3
EIF3A-202ENST00000462527 APBB1O00213 710 aa13.16□□□□□ -0.3
EIF3A-202ENST00000462527 NACADO15069 1562 aa13.15□□□□□ -0.3
EIF3A-202ENST00000462527 ZMYND10O75800 440 aa13.14□□□□□ -0.31
EIF3A-202ENST00000462527 ARHGEF1Q92888 912 aaKnown RBP13.14□□□□□ -0.31
EIF3A-202ENST00000462527 SHROOM4Q9ULL8 1493 aa13.13□□□□□ -0.31
EIF3A-202ENST00000462527 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
EIF3A-202ENST00000462527 IL27Q8NEV9 243 aa13.11□□□□□ -0.31
EIF3A-202ENST00000462527 SP7Q8TDD2 431 aaPredicted RBP13.11□□□□□ -0.31
EIF3A-202ENST00000462527 NECTIN2Q92692 538 aa13.1□□□□□ -0.31
EIF3A-202ENST00000462527 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
EIF3A-202ENST00000462527 C19orf67A6NJJ6 358 aa13.09□□□□□ -0.31
EIF3A-202ENST00000462527 STK24Q9Y6E0 443 aa13.09□□□□□ -0.31
EIF3A-202ENST00000462527 ARID3CA6NKF2 412 aa13.08□□□□□ -0.32
EIF3A-202ENST00000462527 DCAF1Q9Y4B6 1507 aa13.07□□□□□ -0.32
EIF3A-202ENST00000462527 SMYD5Q6GMV2 418 aa13.06□□□□□ -0.32
EIF3A-202ENST00000462527 LOC105371045A0A1W2PR82 267 aa13.05□□□□□ -0.32
EIF3A-202ENST00000462527 TESPA1A2RU30 521 aaPredicted RBP13.05□□□□□ -0.32
EIF3A-202ENST00000462527 AK7Q96M32 723 aa13.05□□□□□ -0.32
EIF3A-202ENST00000462527 SGIP1Q9BQI5 828 aa13.05□□□□□ -0.32
EIF3A-202ENST00000462527 MYO15BQ96JP2 1530 aa13.04□□□□□ -0.32
EIF3A-202ENST00000462527 KCTD17Q8N5Z5 321 aa13.04□□□□□ -0.32
EIF3A-202ENST00000462527 BCL11BQ9C0K0 894 aaPredicted RBP13.04□□□□□ -0.32
EIF3A-202ENST00000462527 BARGINQ6ZT62 677 aa13.03□□□□□ -0.32
EIF3A-202ENST00000462527 DCAF8Q5TAQ9 597 aa13.02□□□□□ -0.33
EIF3A-202ENST00000462527 GPBP1L1Q9HC44 474 aaPredicted RBP13.01□□□□□ -0.33
EIF3A-202ENST00000462527 HMGB1P09429 215 aaKnown RBP13□□□□□ -0.33
EIF3A-202ENST00000462527 FLIIQ13045 1269 aa13□□□□□ -0.33
EIF3A-202ENST00000462527 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
EIF3A-202ENST00000462527 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
EIF3A-202ENST00000462527 SEMA3EO15041 775 aa12.98□□□□□ -0.33
EIF3A-202ENST00000462527 RAD21O60216 631 aa12.98□□□□□ -0.33
EIF3A-202ENST00000462527 CD44P16070 742 aaKnown RBP12.98□□□□□ -0.33
EIF3A-202ENST00000462527 MKRN3Q13064 507 aaKnown RBP12.97□□□□□ -0.33
EIF3A-202ENST00000462527 KDM4CQ9H3R0 1056 aa12.97□□□□□ -0.33
EIF3A-202ENST00000462527 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.95□□□□□ -0.34
EIF3A-202ENST00000462527 ZFP91Q96JP5 570 aaPredicted RBP12.95□□□□□ -0.34
EIF3A-202ENST00000462527 SCRIBQ14160 1630 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms