RNA–Protein interactions for RNA: ENST00000461603.5

LMBR1-215, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-215ENST00000461603 ZNF579Q8NAF0 562 aaKnown RBP12.31□□□□□ -0.44
LMBR1-215ENST00000461603 ZRANB1Q9UGI0 708 aa12.29□□□□□ -0.44
LMBR1-215ENST00000461603 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
LMBR1-215ENST00000461603 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
LMBR1-215ENST00000461603 DCAF8Q5TAQ9 597 aa12.24□□□□□ -0.45
LMBR1-215ENST00000461603 TSPYL2Q9H2G4 693 aaPredicted RBP12.24□□□□□ -0.45
LMBR1-215ENST00000461603 SP7Q8TDD2 431 aaPredicted RBP12.23□□□□□ -0.45
LMBR1-215ENST00000461603 CHRM1P11229 460 aaPredicted RBP12.22□□□□□ -0.45
LMBR1-215ENST00000461603 EVX2Q03828 476 aa12.22□□□□□ -0.45
LMBR1-215ENST00000461603 SGIP1Q9BQI5 828 aa12.21□□□□□ -0.45
LMBR1-215ENST00000461603 RB1CC1Q8TDY2 1594 aa12.2□□□□□ -0.46
LMBR1-215ENST00000461603 CIZ1Q9ULV3 898 aaPredicted RBP12.15□□□□□ -0.46
LMBR1-215ENST00000461603 KIF12Q96FN5 646 aa12.14□□□□□ -0.47
LMBR1-215ENST00000461603 GABBR2O75899 941 aa12.09□□□□□ -0.47
LMBR1-215ENST00000461603 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
LMBR1-215ENST00000461603 AMER1Q5JTC6 1135 aaPredicted RBP12.07□□□□□ -0.48
LMBR1-215ENST00000461603 ZNF467Q7Z7K2 595 aaPredicted RBP12.06□□□□□ -0.48
LMBR1-215ENST00000461603 MAP3K13O43283 966 aa12.05□□□□□ -0.48
LMBR1-215ENST00000461603 PYGBP11216 843 aa12.04□□□□□ -0.48
LMBR1-215ENST00000461603 PKD2Q13563 968 aa12.04□□□□□ -0.48
LMBR1-215ENST00000461603 PCDHB13Q9Y5F0 798 aa12.04□□□□□ -0.48
LMBR1-215ENST00000461603 TAOK2Q9UL54 1235 aa12.01□□□□□ -0.49
LMBR1-215ENST00000461603 NACADO15069 1562 aa12.01□□□□□ -0.49
LMBR1-215ENST00000461603 MS4A3Q96HJ5 214 aa12□□□□□ -0.49
LMBR1-215ENST00000461603 ECM2O94769 699 aaPredicted RBP11.99□□□□□ -0.49
LMBR1-215ENST00000461603 GALR2O43603 387 aaPredicted RBP11.98□□□□□ -0.49
LMBR1-215ENST00000461603 TIE1P35590 1138 aa11.96□□□□□ -0.49
LMBR1-215ENST00000461603 IFNL1Q8IU54 200 aa11.96□□□□□ -0.49
LMBR1-215ENST00000461603 UNC13AQ9UPW8 1703 aa11.94□□□□□ -0.5
LMBR1-215ENST00000461603 DCAF8L2P0C7V8 631 aa11.94□□□□□ -0.5
LMBR1-215ENST00000461603 RIOK3O14730 519 aaKnown RBP11.93□□□□□ -0.5
LMBR1-215ENST00000461603 DCBLD2Q96PD2 775 aa11.92□□□□□ -0.5
LMBR1-215ENST00000461603 PDAP1Q13442 181 aaKnown RBP11.91□□□□□ -0.5
LMBR1-215ENST00000461603 VGFO15240 615 aaPredicted RBP11.9□□□□□ -0.5
LMBR1-215ENST00000461603 ASTLQ6HA08 431 aaPredicted RBP11.9□□□□□ -0.5
LMBR1-215ENST00000461603 RNF25Q96BH1 459 aaPredicted RBP11.87□□□□□ -0.51
LMBR1-215ENST00000461603 PCDHB8Q9UN66 801 aa11.87□□□□□ -0.51
LMBR1-215ENST00000461603 BICRAQ9NZM4 1560 aa11.87□□□□□ -0.51
LMBR1-215ENST00000461603 PSEN1P49768 467 aa11.84□□□□□ -0.51
LMBR1-215ENST00000461603 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
LMBR1-215ENST00000461603 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
LMBR1-215ENST00000461603 ATMINO43313 823 aaPredicted RBP11.83□□□□□ -0.52
LMBR1-215ENST00000461603 TTLL13PA6NNM8 815 aa11.82□□□□□ -0.52
LMBR1-215ENST00000461603 RGL2O15211 777 aa11.82□□□□□ -0.52
LMBR1-215ENST00000461603 TMEM106CQ9BVX2 250 aa11.81□□□□□ -0.52
LMBR1-215ENST00000461603 IER5LQ5T953 404 aa11.79□□□□□ -0.52
LMBR1-215ENST00000461603 TRPC6Q9Y210 931 aa11.79□□□□□ -0.52
LMBR1-215ENST00000461603 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
LMBR1-215ENST00000461603 SLC39A7Q92504 469 aa11.77□□□□□ -0.53
LMBR1-215ENST00000461603 DNAJC5Q9H3Z4 198 aa11.77□□□□□ -0.53
LMBR1-215ENST00000461603 CECR2Q9BXF3 1484 aa11.76□□□□□ -0.53
LMBR1-215ENST00000461603 ATN1P54259 1190 aaPredicted RBP11.76□□□□□ -0.53
LMBR1-215ENST00000461603 C7P10643 843 aa11.75□□□□□ -0.53
LMBR1-215ENST00000461603 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.74□□□□□ -0.53
LMBR1-215ENST00000461603 ZFP91Q96JP5 570 aaPredicted RBP11.74□□□□□ -0.53
LMBR1-215ENST00000461603 CC2D2AQ9P2K1 1620 aa11.74□□□□□ -0.53
LMBR1-215ENST00000461603 TRIM35Q9UPQ4 493 aa11.73□□□□□ -0.53
LMBR1-215ENST00000461603 GOLGA2Q08379 1002 aa11.71□□□□□ -0.53
LMBR1-215ENST00000461603 HS6ST3Q8IZP7 471 aa11.7□□□□□ -0.54
LMBR1-215ENST00000461603 STK25O00506 426 aa11.68□□□□□ -0.54
LMBR1-215ENST00000461603 MKRN3Q13064 507 aaKnown RBP11.68□□□□□ -0.54
LMBR1-215ENST00000461603 MYO15BQ96JP2 1530 aa11.68□□□□□ -0.54
LMBR1-215ENST00000461603 PELP1Q8IZL8 1130 aaKnown RBP11.67□□□□□ -0.54
LMBR1-215ENST00000461603 BCL11BQ9C0K0 894 aaPredicted RBP11.67□□□□□ -0.54
LMBR1-215ENST00000461603 SOX12O15370 315 aa11.66□□□□□ -0.54
LMBR1-215ENST00000461603 ILDR1Q86SU0 546 aaPredicted RBP11.64□□□□□ -0.55
LMBR1-215ENST00000461603 CABP2Q9NPB3 220 aa11.64□□□□□ -0.55
LMBR1-215ENST00000461603 METRNQ9UJH8 293 aa11.64□□□□□ -0.55
LMBR1-215ENST00000461603 STK24Q9Y6E0 443 aa11.64□□□□□ -0.55
LMBR1-215ENST00000461603 SHROOM4Q9ULL8 1493 aa11.62□□□□□ -0.55
LMBR1-215ENST00000461603 IRX5P78411 483 aaPredicted RBP11.61□□□□□ -0.55
LMBR1-215ENST00000461603 OCEL1Q9H607 264 aa11.61□□□□□ -0.55
LMBR1-215ENST00000461603 EIF4G1Q04637 1599 aaKnown RBP11.61□□□□□ -0.55
LMBR1-215ENST00000461603 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
LMBR1-215ENST00000461603 RYDENQ9NUL5 291 aaKnown RBP11.59□□□□□ -0.55
LMBR1-215ENST00000461603 SEC24BO95487 1268 aa11.58□□□□□ -0.56
LMBR1-215ENST00000461603 EFCAB3Q8N7B9 438 aa11.58□□□□□ -0.56
LMBR1-215ENST00000461603 PLCG2P16885 1265 aa11.57□□□□□ -0.56
LMBR1-215ENST00000461603 NLRP6P59044 892 aa11.55□□□□□ -0.56
LMBR1-215ENST00000461603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.55□□□□□ -0.564e-7■■□□□ 11.5
LMBR1-215ENST00000461603 SCRIBQ14160 1630 aa11.53□□□□□ -0.56
LMBR1-215ENST00000461603 PDCD7Q8N8D1 485 aaKnown RBP11.52□□□□□ -0.57
LMBR1-215ENST00000461603 POTEFA5A3E0 1075 aa11.51□□□□□ -0.57
LMBR1-215ENST00000461603 BBXQ8WY36 941 aaPredicted RBP11.51□□□□□ -0.57
LMBR1-215ENST00000461603 L3MBTL3Q96JM7 780 aaPredicted RBP11.5□□□□□ -0.57
LMBR1-215ENST00000461603 COLQQ9Y215 455 aaPredicted RBP11.5□□□□□ -0.57
LMBR1-215ENST00000461603 MAMSTRQ6ZN01 415 aa11.48□□□□□ -0.57
LMBR1-215ENST00000461603 FBXO22Q8NEZ5 403 aa11.48□□□□□ -0.57
LMBR1-215ENST00000461603 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
LMBR1-215ENST00000461603 LHX8Q68G74 356 aa11.46□□□□□ -0.57
LMBR1-215ENST00000461603 PHF8Q9UPP1 1060 aa11.45□□□□□ -0.58
LMBR1-215ENST00000461603 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.43□□□□□ -0.58
LMBR1-215ENST00000461603 ZCCHC6Q5VYS8 1495 aaKnown RBP11.43□□□□□ -0.58
LMBR1-215ENST00000461603 NKX1-1Q15270 411 aaPredicted RBP11.42□□□□□ -0.58
LMBR1-215ENST00000461603 MS4A4AQ96JQ5 239 aa11.41□□□□□ -0.58
LMBR1-215ENST00000461603 DCAF1Q9Y4B6 1507 aa11.4□□□□□ -0.58
LMBR1-215ENST00000461603 G3V3G9 751 aa11.4□□□□□ -0.58
LMBR1-215ENST00000461603 TMEM121BQ9BXQ6 578 aaPredicted RBP11.4□□□□□ -0.58
LMBR1-215ENST00000461603 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
LMBR1-215ENST00000461603 BOLA1Q9Y3E2 137 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms