RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 PELP1Q8IZL8 1130 aaKnown RBP9.47□□□□□ -0.89
VPS8-215ENST00000460158 PLCD3Q8N3E9 789 aa9.47□□□□□ -0.89
VPS8-215ENST00000460158 KIF12Q96FN5 646 aa9.47□□□□□ -0.89
VPS8-215ENST00000460158 ATMINO43313 823 aaPredicted RBP9.46□□□□□ -0.9
VPS8-215ENST00000460158 ZBTB47Q9UFB7 747 aaPredicted RBP9.46□□□□□ -0.9
VPS8-215ENST00000460158 C7P10643 843 aa9.44□□□□□ -0.9
VPS8-215ENST00000460158 RASEFQ8IZ41 740 aa9.44□□□□□ -0.9
VPS8-215ENST00000460158 SLC39A7Q92504 469 aa9.44□□□□□ -0.9
VPS8-215ENST00000460158 POTEB2H3BUK9 544 aa9.43□□□□□ -0.9
VPS8-215ENST00000460158 OTUD5Q96G74 571 aa9.42□□□□□ -0.9
VPS8-215ENST00000460158 METRNQ9UJH8 293 aa9.42□□□□□ -0.9
VPS8-215ENST00000460158 MAP3K13O43283 966 aa9.39□□□□□ -0.91
VPS8-215ENST00000460158 TIE1P35590 1138 aa9.37□□□□□ -0.91
VPS8-215ENST00000460158 NUBP1P53384 320 aa9.37□□□□□ -0.91
VPS8-215ENST00000460158 ATN1P54259 1190 aaPredicted RBP9.37□□□□□ -0.91
VPS8-215ENST00000460158 SGIP1Q9BQI5 828 aa9.37□□□□□ -0.91
VPS8-215ENST00000460158 BMP2KQ9NSY1 1161 aaPredicted RBP9.36□□□□□ -0.91
VPS8-215ENST00000460158 FBXO3Q9UK99 471 aa9.34□□□□□ -0.91
VPS8-215ENST00000460158 MAMSTRQ6ZN01 415 aa9.33□□□□□ -0.92
VPS8-215ENST00000460158 TRPC6Q9Y210 931 aa9.33□□□□□ -0.92
VPS8-215ENST00000460158 FAM212AQ96EL1 285 aa9.32□□□□□ -0.92
VPS8-215ENST00000460158 TTLL13PA6NNM8 815 aa9.3□□□□□ -0.92
VPS8-215ENST00000460158 PCDHB13Q9Y5F0 798 aa9.3□□□□□ -0.92
VPS8-215ENST00000460158 POTEJP0CG39 1038 aa9.29□□□□□ -0.92
VPS8-215ENST00000460158 POTEFA5A3E0 1075 aa9.25□□□□□ -0.93
VPS8-215ENST00000460158 SCUBE2Q9NQ36 999 aa9.25□□□□□ -0.93
VPS8-215ENST00000460158 IER5LQ5T953 404 aa9.24□□□□□ -0.93
VPS8-215ENST00000460158 IFNL1Q8IU54 200 aa9.24□□□□□ -0.93
VPS8-215ENST00000460158 TRIM35Q9UPQ4 493 aa9.23□□□□□ -0.93
VPS8-215ENST00000460158 SEC24BO95487 1268 aa9.22□□□□□ -0.93
VPS8-215ENST00000460158 VASPP50552 380 aaPredicted RBP9.21□□□□□ -0.94
VPS8-215ENST00000460158 DCAF8Q5TAQ9 597 aa9.21□□□□□ -0.94
VPS8-215ENST00000460158 COLQQ9Y215 455 aaPredicted RBP9.2□□□□□ -0.94
VPS8-215ENST00000460158 TMEM106CQ9BVX2 250 aa9.19□□□□□ -0.94
VPS8-215ENST00000460158 POTEMA6NI47 508 aa9.18□□□□□ -0.94
VPS8-215ENST00000460158 RTN4Q9NQC3 1192 aaKnown RBP9.18□□□□□ -0.94
VPS8-215ENST00000460158 PYGBP11216 843 aa9.15□□□□□ -0.94
VPS8-215ENST00000460158 AMER1Q5JTC6 1135 aaPredicted RBP9.15□□□□□ -0.94
VPS8-215ENST00000460158 POTEGQ6S5H5 508 aa9.15□□□□□ -0.94
VPS8-215ENST00000460158 KLHL34Q8N239 644 aa9.15□□□□□ -0.94
VPS8-215ENST00000460158 GSE1Q14687 1217 aa9.14□□□□□ -0.95
VPS8-215ENST00000460158 IFNLR1Q8IU57 520 aaPredicted RBP9.13□□□□□ -0.95
VPS8-215ENST00000460158 PLCG2P16885 1265 aa9.11□□□□□ -0.95
VPS8-215ENST00000460158 PLSCR2Q9NRY7 297 aa9.11□□□□□ -0.95
VPS8-215ENST00000460158 PCDH10Q9P2E7 1040 aa9.11□□□□□ -0.95
VPS8-215ENST00000460158 IRX5P78411 483 aaPredicted RBP9.1□□□□□ -0.95
VPS8-215ENST00000460158 CHRM1P11229 460 aaPredicted RBP9.09□□□□□ -0.95
VPS8-215ENST00000460158 FAM163AQ96GL9 167 aaPredicted RBP9.09□□□□□ -0.95
VPS8-215ENST00000460158 PCDHB8Q9UN66 801 aa9.09□□□□□ -0.95
VPS8-215ENST00000460158 LCE2DQ5TA82 110 aaPredicted RBP9.08□□□□□ -0.96
VPS8-215ENST00000460158 ZNF467Q7Z7K2 595 aaPredicted RBP9.08□□□□□ -0.96
VPS8-215ENST00000460158 OCEL1Q9H607 264 aa9.07□□□□□ -0.96
VPS8-215ENST00000460158 SLAIN1Q8ND83 568 aa9.03□□□□□ -0.96
VPS8-215ENST00000460158 SPOCK2Q92563 424 aa9.01□□□□□ -0.97
VPS8-215ENST00000460158 PSEN1P49768 467 aa8.98□□□□□ -0.97
VPS8-215ENST00000460158 GOLGA2Q08379 1002 aa8.98□□□□□ -0.97
VPS8-215ENST00000460158 MKRN3Q13064 507 aaKnown RBP8.98□□□□□ -0.97
VPS8-215ENST00000460158 PDAP1Q13442 181 aaKnown RBP8.95□□□□□ -0.98
VPS8-215ENST00000460158 PDCD7Q8N8D1 485 aaKnown RBP8.95□□□□□ -0.98
VPS8-215ENST00000460158 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.95□□□□□ -0.98
VPS8-215ENST00000460158 L3MBTL3Q96JM7 780 aaPredicted RBP8.94□□□□□ -0.98
VPS8-215ENST00000460158 CIZ1Q9ULV3 898 aaPredicted RBP8.94□□□□□ -0.98
VPS8-215ENST00000460158 SNPHO15079 494 aa8.92□□□□□ -0.98
VPS8-215ENST00000460158 ST18O60284 1047 aa8.92□□□□□ -0.98
VPS8-215ENST00000460158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.91□□□□□ -0.983e-9■□□□□ 9
VPS8-215ENST00000460158 ILDR1Q86SU0 546 aaPredicted RBP8.9□□□□□ -0.98
VPS8-215ENST00000460158 TRIM41Q8WV44 630 aa8.9□□□□□ -0.98
VPS8-215ENST00000460158 TMEM121BQ9BXQ6 578 aaPredicted RBP8.9□□□□□ -0.98
VPS8-215ENST00000460158 C3orf67Q6ZVT6 689 aa8.89□□□□□ -0.99
VPS8-215ENST00000460158 PKD2Q13563 968 aa8.88□□□□□ -0.99
VPS8-215ENST00000460158 CDAN1Q8IWY9 1227 aa8.87□□□□□ -0.99
VPS8-215ENST00000460158 CABP2Q9NPB3 220 aa8.85□□□□□ -0.99
VPS8-215ENST00000460158 G3V3G9 751 aa8.79□□□□□ -1
VPS8-215ENST00000460158 DPY19L2Q6NUT2 758 aa8.79□□□□□ -1
VPS8-215ENST00000460158 BOLA1Q9Y3E2 137 aa8.79□□□□□ -1
VPS8-215ENST00000460158 ECM2O94769 699 aaPredicted RBP8.78□□□□□ -1
VPS8-215ENST00000460158 MARVELD3Q96A59 401 aa8.75□□□□□ -1.01
VPS8-215ENST00000460158 RIOK3O14730 519 aaKnown RBP8.74□□□□□ -1.01
VPS8-215ENST00000460158 EFCAB3Q8N7B9 438 aa8.74□□□□□ -1.01
VPS8-215ENST00000460158 DCAF8L2P0C7V8 631 aa8.72□□□□□ -1.01
VPS8-215ENST00000460158 RGL2O15211 777 aa8.71□□□□□ -1.02
VPS8-215ENST00000460158 EMP3P54852 163 aa8.71□□□□□ -1.02
VPS8-215ENST00000460158 VGFO15240 615 aaPredicted RBP8.7□□□□□ -1.02
VPS8-215ENST00000460158 SOX12O15370 315 aa8.7□□□□□ -1.02
VPS8-215ENST00000460158 RNF25Q96BH1 459 aaPredicted RBP8.7□□□□□ -1.02
VPS8-215ENST00000460158 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.68□□□□□ -1.02
VPS8-215ENST00000460158 ZFP91Q96JP5 570 aaPredicted RBP8.68□□□□□ -1.02
VPS8-215ENST00000460158 HOXB3P14651 431 aaPredicted RBP8.67□□□□□ -1.02
VPS8-215ENST00000460158 SPNS2Q8IVW8 549 aa8.66□□□□□ -1.02
VPS8-215ENST00000460158 TAOK2Q9UL54 1235 aa8.66□□□□□ -1.02
VPS8-215ENST00000460158 DOK7Q18PE1 504 aa8.65□□□□□ -1.02
VPS8-215ENST00000460158 HS3ST6Q96QI5 342 aa8.65□□□□□ -1.02
VPS8-215ENST00000460158 FAM205CA6NFA0 338 aa8.64□□□□□ -1.03
VPS8-215ENST00000460158 MMRN1Q13201 1228 aa8.64□□□□□ -1.03
VPS8-215ENST00000460158 MICALL2Q8IY33 904 aa8.64□□□□□ -1.03
VPS8-215ENST00000460158 ZNF710Q8N1W2 664 aa8.64□□□□□ -1.03
VPS8-215ENST00000460158 HOXB1P14653 301 aaPredicted RBP8.63□□□□□ -1.03
VPS8-215ENST00000460158 POTEB3A0JP26 581 aa8.62□□□□□ -1.03
VPS8-215ENST00000460158 RIMBP2O15034 1052 aa8.62□□□□□ -1.03
VPS8-215ENST00000460158 POTEBQ6S5H4 581 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms