RNA–Protein interactions for RNA: ENST00000458450.1

LINC01399-202, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

BASIC

Gene LINC01399, Length 244 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-202ENST00000458450 ASTLQ6HA08 431 aaPredicted RBP8.63□□□□□ -1.03
LINC01399-202ENST00000458450 POTEB2H3BUK9 544 aa8.61□□□□□ -1.03
LINC01399-202ENST00000458450 ATMINO43313 823 aaPredicted RBP8.61□□□□□ -1.03
LINC01399-202ENST00000458450 KIF12Q96FN5 646 aa8.61□□□□□ -1.03
LINC01399-202ENST00000458450 FKBP8Q14318 412 aa8.6□□□□□ -1.03
LINC01399-202ENST00000458450 RASEFQ8IZ41 740 aa8.6□□□□□ -1.03
LINC01399-202ENST00000458450 OTUD5Q96G74 571 aa8.6□□□□□ -1.03
LINC01399-202ENST00000458450 C7P10643 843 aa8.59□□□□□ -1.03
LINC01399-202ENST00000458450 SLC39A7Q92504 469 aa8.59□□□□□ -1.03
LINC01399-202ENST00000458450 METRNQ9UJH8 293 aa8.59□□□□□ -1.03
LINC01399-202ENST00000458450 ZBTB47Q9UFB7 747 aaPredicted RBP8.58□□□□□ -1.04
LINC01399-202ENST00000458450 MAP3K13O43283 966 aa8.56□□□□□ -1.04
LINC01399-202ENST00000458450 ATN1P54259 1190 aaPredicted RBP8.55□□□□□ -1.04
LINC01399-202ENST00000458450 BMP2KQ9NSY1 1161 aaPredicted RBP8.52□□□□□ -1.05
LINC01399-202ENST00000458450 TIE1P35590 1138 aa8.51□□□□□ -1.05
LINC01399-202ENST00000458450 TRPC6Q9Y210 931 aa8.51□□□□□ -1.05
LINC01399-202ENST00000458450 NUBP1P53384 320 aa8.5□□□□□ -1.05
LINC01399-202ENST00000458450 MAMSTRQ6ZN01 415 aa8.5□□□□□ -1.05
LINC01399-202ENST00000458450 PCDHB13Q9Y5F0 798 aa8.49□□□□□ -1.05
LINC01399-202ENST00000458450 FAM212AQ96EL1 285 aa8.48□□□□□ -1.05
LINC01399-202ENST00000458450 SGIP1Q9BQI5 828 aa8.48□□□□□ -1.05
LINC01399-202ENST00000458450 POTEJP0CG39 1038 aa8.47□□□□□ -1.05
LINC01399-202ENST00000458450 TTLL13PA6NNM8 815 aa8.46□□□□□ -1.06
LINC01399-202ENST00000458450 FBXO3Q9UK99 471 aa8.46□□□□□ -1.06
LINC01399-202ENST00000458450 SCUBE2Q9NQ36 999 aa8.45□□□□□ -1.06
LINC01399-202ENST00000458450 SEC24BO95487 1268 aa8.44□□□□□ -1.06
LINC01399-202ENST00000458450 POTEFA5A3E0 1075 aa8.42□□□□□ -1.06
LINC01399-202ENST00000458450 DCAF8Q5TAQ9 597 aa8.42□□□□□ -1.06
LINC01399-202ENST00000458450 IFNL1Q8IU54 200 aa8.42□□□□□ -1.06
LINC01399-202ENST00000458450 PLSCR2Q9NRY7 297 aa8.41□□□□□ -1.06
LINC01399-202ENST00000458450 TRIM35Q9UPQ4 493 aa8.41□□□□□ -1.06
LINC01399-202ENST00000458450 POTEMA6NI47 508 aa8.4□□□□□ -1.06
LINC01399-202ENST00000458450 COLQQ9Y215 455 aaPredicted RBP8.39□□□□□ -1.07
LINC01399-202ENST00000458450 IER5LQ5T953 404 aa8.38□□□□□ -1.07
LINC01399-202ENST00000458450 POTEGQ6S5H5 508 aa8.38□□□□□ -1.07
LINC01399-202ENST00000458450 TMEM106CQ9BVX2 250 aa8.38□□□□□ -1.07
LINC01399-202ENST00000458450 PYGBP11216 843 aa8.36□□□□□ -1.07
LINC01399-202ENST00000458450 KLHL34Q8N239 644 aa8.36□□□□□ -1.07
LINC01399-202ENST00000458450 FAM163AQ96GL9 167 aaPredicted RBP8.35□□□□□ -1.07
LINC01399-202ENST00000458450 VASPP50552 380 aaPredicted RBP8.33□□□□□ -1.08
LINC01399-202ENST00000458450 PLCG2P16885 1265 aa8.31□□□□□ -1.08
LINC01399-202ENST00000458450 GSE1Q14687 1217 aa8.3□□□□□ -1.08
LINC01399-202ENST00000458450 PCDHB8Q9UN66 801 aa8.3□□□□□ -1.08
LINC01399-202ENST00000458450 PCDH10Q9P2E7 1040 aa8.28□□□□□ -1.08
LINC01399-202ENST00000458450 LCE2DQ5TA82 110 aaPredicted RBP8.27□□□□□ -1.09
LINC01399-202ENST00000458450 IRX5P78411 483 aaPredicted RBP8.26□□□□□ -1.09
LINC01399-202ENST00000458450 SLAIN1Q8ND83 568 aa8.25□□□□□ -1.09
LINC01399-202ENST00000458450 OCEL1Q9H607 264 aa8.25□□□□□ -1.09
LINC01399-202ENST00000458450 ZNF467Q7Z7K2 595 aaPredicted RBP8.24□□□□□ -1.09
LINC01399-202ENST00000458450 CHRM1P11229 460 aaPredicted RBP8.22□□□□□ -1.09
LINC01399-202ENST00000458450 GOLGA2Q08379 1002 aa8.21□□□□□ -1.1
LINC01399-202ENST00000458450 MKRN3Q13064 507 aaKnown RBP8.18□□□□□ -1.1
LINC01399-202ENST00000458450 SPOCK2Q92563 424 aa8.18□□□□□ -1.1
LINC01399-202ENST00000458450 PSEN1P49768 467 aa8.17□□□□□ -1.1
LINC01399-202ENST00000458450 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.17□□□□□ -1.1
LINC01399-202ENST00000458450 CIZ1Q9ULV3 898 aaPredicted RBP8.17□□□□□ -1.1
LINC01399-202ENST00000458450 IFNLR1Q8IU57 520 aaPredicted RBP8.16□□□□□ -1.1
LINC01399-202ENST00000458450 ST18O60284 1047 aa8.15□□□□□ -1.1
LINC01399-202ENST00000458450 SNPHO15079 494 aa8.13□□□□□ -1.11
LINC01399-202ENST00000458450 PDAP1Q13442 181 aaKnown RBP8.13□□□□□ -1.11
LINC01399-202ENST00000458450 CDAN1Q8IWY9 1227 aa8.13□□□□□ -1.11
LINC01399-202ENST00000458450 PDCD7Q8N8D1 485 aaKnown RBP8.13□□□□□ -1.11
LINC01399-202ENST00000458450 L3MBTL3Q96JM7 780 aaPredicted RBP8.13□□□□□ -1.11
LINC01399-202ENST00000458450 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC01399-202ENST00000458450 C3orf67Q6ZVT6 689 aa8.11□□□□□ -1.11
LINC01399-202ENST00000458450 TMEM121BQ9BXQ6 578 aaPredicted RBP8.08□□□□□ -1.12
LINC01399-202ENST00000458450 CABP2Q9NPB3 220 aa8.07□□□□□ -1.12
LINC01399-202ENST00000458450 G3V3G9 751 aa8.04□□□□□ -1.12
LINC01399-202ENST00000458450 DPY19L2Q6NUT2 758 aa8.03□□□□□ -1.12
LINC01399-202ENST00000458450 ILDR1Q86SU0 546 aaPredicted RBP8.03□□□□□ -1.12
LINC01399-202ENST00000458450 TRIM41Q8WV44 630 aa8.03□□□□□ -1.12
LINC01399-202ENST00000458450 MARVELD3Q96A59 401 aa8.03□□□□□ -1.12
LINC01399-202ENST00000458450 BOLA1Q9Y3E2 137 aa8□□□□□ -1.13
LINC01399-202ENST00000458450 EMP3P54852 163 aa7.97□□□□□ -1.13
LINC01399-202ENST00000458450 EFCAB3Q8N7B9 438 aa7.96□□□□□ -1.14
LINC01399-202ENST00000458450 RIOK3O14730 519 aaKnown RBP7.93□□□□□ -1.14
LINC01399-202ENST00000458450 FAM205CA6NFA0 338 aa7.92□□□□□ -1.14
LINC01399-202ENST00000458450 SPNS2Q8IVW8 549 aa7.92□□□□□ -1.14
LINC01399-202ENST00000458450 SOX12O15370 315 aa7.9□□□□□ -1.14
LINC01399-202ENST00000458450 ZNF710Q8N1W2 664 aa7.9□□□□□ -1.14
LINC01399-202ENST00000458450 HS3ST6Q96QI5 342 aa7.9□□□□□ -1.14
LINC01399-202ENST00000458450 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.89□□□□□ -1.15
LINC01399-202ENST00000458450 VGFO15240 615 aaPredicted RBP7.89□□□□□ -1.15
LINC01399-202ENST00000458450 HOXB3P14651 431 aaPredicted RBP7.89□□□□□ -1.15
LINC01399-202ENST00000458450 MMRN1Q13201 1228 aa7.89□□□□□ -1.15
LINC01399-202ENST00000458450 RNF25Q96BH1 459 aaPredicted RBP7.89□□□□□ -1.15
LINC01399-202ENST00000458450 ZFP91Q96JP5 570 aaPredicted RBP7.89□□□□□ -1.15
LINC01399-202ENST00000458450 DOK7Q18PE1 504 aa7.88□□□□□ -1.15
LINC01399-202ENST00000458450 POTEB3A0JP26 581 aa7.87□□□□□ -1.15
LINC01399-202ENST00000458450 POTEBQ6S5H4 581 aa7.87□□□□□ -1.15
LINC01399-202ENST00000458450 MICALL2Q8IY33 904 aa7.86□□□□□ -1.15
LINC01399-202ENST00000458450 RIMBP2O15034 1052 aa7.85□□□□□ -1.15
LINC01399-202ENST00000458450 HOXB1P14653 301 aaPredicted RBP7.85□□□□□ -1.15
LINC01399-202ENST00000458450 TAOK2Q9UL54 1235 aa7.84□□□□□ -1.15
LINC01399-202ENST00000458450 PHF8Q9UPP1 1060 aa7.84□□□□□ -1.15
LINC01399-202ENST00000458450 MS4A4AQ96JQ5 239 aa7.83□□□□□ -1.16
LINC01399-202ENST00000458450 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
LINC01399-202ENST00000458450 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
LINC01399-202ENST00000458450 ERBB3P21860 1342 aa7.82□□□□□ -1.16
LINC01399-202ENST00000458450 TMEM92Q6UXU6 159 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms