RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 METRNQ9UJH8 293 aa12.68□□□□□ -0.38
UBDP1-202ENST00000457888 CCDC61Q9Y6R9 512 aa12.67□□□□□ -0.38
UBDP1-202ENST00000457888 SLC39A7Q92504 469 aa12.66□□□□□ -0.38
UBDP1-202ENST00000457888 C7P10643 843 aa12.65□□□□□ -0.38
UBDP1-202ENST00000457888 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
UBDP1-202ENST00000457888 MIER1Q8N108 512 aa12.62□□□□□ -0.39
UBDP1-202ENST00000457888 KIF12Q96FN5 646 aa12.61□□□□□ -0.39
UBDP1-202ENST00000457888 PLSCR2Q9NRY7 297 aa12.61□□□□□ -0.39
UBDP1-202ENST00000457888 ATN1P54259 1190 aaPredicted RBP12.58□□□□□ -0.4
UBDP1-202ENST00000457888 POTEJP0CG39 1038 aa12.56□□□□□ -0.4
UBDP1-202ENST00000457888 RASEFQ8IZ41 740 aa12.56□□□□□ -0.4
UBDP1-202ENST00000457888 MAMSTRQ6ZN01 415 aa12.55□□□□□ -0.4
UBDP1-202ENST00000457888 POTEMA6NI47 508 aa12.53□□□□□ -0.4
UBDP1-202ENST00000457888 MAP3K13O43283 966 aa12.53□□□□□ -0.4
UBDP1-202ENST00000457888 BMP2KQ9NSY1 1161 aaPredicted RBP12.53□□□□□ -0.4
UBDP1-202ENST00000457888 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
UBDP1-202ENST00000457888 TIE1P35590 1138 aa12.49□□□□□ -0.41
UBDP1-202ENST00000457888 POTEGQ6S5H5 508 aa12.49□□□□□ -0.41
UBDP1-202ENST00000457888 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
UBDP1-202ENST00000457888 SCUBE2Q9NQ36 999 aa12.46□□□□□ -0.41
UBDP1-202ENST00000457888 POTEFA5A3E0 1075 aa12.44□□□□□ -0.42
UBDP1-202ENST00000457888 ZBTB47Q9UFB7 747 aaPredicted RBP12.42□□□□□ -0.42
UBDP1-202ENST00000457888 TTLL13PA6NNM8 815 aa12.41□□□□□ -0.42
UBDP1-202ENST00000457888 SGIP1Q9BQI5 828 aa12.4□□□□□ -0.42
UBDP1-202ENST00000457888 NUBP1P53384 320 aa12.38□□□□□ -0.43
UBDP1-202ENST00000457888 PCDHB13Q9Y5F0 798 aa12.38□□□□□ -0.43
UBDP1-202ENST00000457888 SEC24BO95487 1268 aa12.37□□□□□ -0.43
UBDP1-202ENST00000457888 FAM163AQ96GL9 167 aaPredicted RBP12.35□□□□□ -0.43
UBDP1-202ENST00000457888 COLQQ9Y215 455 aaPredicted RBP12.35□□□□□ -0.43
UBDP1-202ENST00000457888 LCE2DQ5TA82 110 aaPredicted RBP12.34□□□□□ -0.43
UBDP1-202ENST00000457888 PCDH10Q9P2E7 1040 aa12.34□□□□□ -0.43
UBDP1-202ENST00000457888 TRIM35Q9UPQ4 493 aa12.33□□□□□ -0.44
UBDP1-202ENST00000457888 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
UBDP1-202ENST00000457888 FKBP8Q14318 412 aa12.31□□□□□ -0.44
UBDP1-202ENST00000457888 IER5LQ5T953 404 aa12.31□□□□□ -0.44
UBDP1-202ENST00000457888 IFNL1Q8IU54 200 aa12.3□□□□□ -0.44
UBDP1-202ENST00000457888 TMEM106CQ9BVX2 250 aa12.24□□□□□ -0.45
UBDP1-202ENST00000457888 DCAF8Q5TAQ9 597 aa12.18□□□□□ -0.46
UBDP1-202ENST00000457888 PLCG2P16885 1265 aa12.17□□□□□ -0.46
UBDP1-202ENST00000457888 SLAIN1Q8ND83 568 aa12.15□□□□□ -0.46
UBDP1-202ENST00000457888 PYGBP11216 843 aa12.14□□□□□ -0.47
UBDP1-202ENST00000457888 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
UBDP1-202ENST00000457888 IRX5P78411 483 aaPredicted RBP12.13□□□□□ -0.47
UBDP1-202ENST00000457888 OCEL1Q9H607 264 aa12.08□□□□□ -0.48
UBDP1-202ENST00000457888 PCDHB8Q9UN66 801 aa12.08□□□□□ -0.48
UBDP1-202ENST00000457888 ST18O60284 1047 aa12.05□□□□□ -0.48
UBDP1-202ENST00000457888 CDAN1Q8IWY9 1227 aa12.05□□□□□ -0.48
UBDP1-202ENST00000457888 GSE1Q14687 1217 aa12.01□□□□□ -0.49
UBDP1-202ENST00000457888 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
UBDP1-202ENST00000457888 VASPP50552 380 aaPredicted RBP12□□□□□ -0.49
UBDP1-202ENST00000457888 ZNF467Q7Z7K2 595 aaPredicted RBP11.98□□□□□ -0.49
UBDP1-202ENST00000457888 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.98□□□□□ -0.49
UBDP1-202ENST00000457888 SNPHO15079 494 aa11.94□□□□□ -0.5
UBDP1-202ENST00000457888 GOLGA2Q08379 1002 aa11.94□□□□□ -0.5
UBDP1-202ENST00000457888 PDCD7Q8N8D1 485 aaKnown RBP11.93□□□□□ -0.5
UBDP1-202ENST00000457888 TMEM121BQ9BXQ6 578 aaPredicted RBP11.93□□□□□ -0.5
UBDP1-202ENST00000457888 CHRM1P11229 460 aaPredicted RBP11.92□□□□□ -0.5
UBDP1-202ENST00000457888 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
UBDP1-202ENST00000457888 PSEN1P49768 467 aa11.88□□□□□ -0.51
UBDP1-202ENST00000457888 C3orf67Q6ZVT6 689 aa11.87□□□□□ -0.51
UBDP1-202ENST00000457888 L3MBTL3Q96JM7 780 aaPredicted RBP11.87□□□□□ -0.51
UBDP1-202ENST00000457888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.51
UBDP1-202ENST00000457888 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
UBDP1-202ENST00000457888 PDAP1Q13442 181 aaKnown RBP11.8□□□□□ -0.52
UBDP1-202ENST00000457888 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
UBDP1-202ENST00000457888 ILDR1Q86SU0 546 aaPredicted RBP11.77□□□□□ -0.53
UBDP1-202ENST00000457888 SPNS2Q8IVW8 549 aa11.77□□□□□ -0.53
UBDP1-202ENST00000457888 IFNLR1Q8IU57 520 aaPredicted RBP11.76□□□□□ -0.53
UBDP1-202ENST00000457888 CIZ1Q9ULV3 898 aaPredicted RBP11.76□□□□□ -0.53
UBDP1-202ENST00000457888 EMP3P54852 163 aa11.74□□□□□ -0.53
UBDP1-202ENST00000457888 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
UBDP1-202ENST00000457888 CABP2Q9NPB3 220 aa11.74□□□□□ -0.53
UBDP1-202ENST00000457888 DPY19L2Q6NUT2 758 aa11.72□□□□□ -0.53
UBDP1-202ENST00000457888 G3V3G9 751 aa11.69□□□□□ -0.54
UBDP1-202ENST00000457888 BOLA1Q9Y3E2 137 aa11.68□□□□□ -0.54
UBDP1-202ENST00000457888 HS3ST6Q96QI5 342 aa11.66□□□□□ -0.54
UBDP1-202ENST00000457888 FAM205CA6NFA0 338 aa11.65□□□□□ -0.54
UBDP1-202ENST00000457888 POTEB3A0JP26 581 aa11.64□□□□□ -0.55
UBDP1-202ENST00000457888 POTEBQ6S5H4 581 aa11.64□□□□□ -0.55
UBDP1-202ENST00000457888 HOXB3P14651 431 aaPredicted RBP11.6□□□□□ -0.55
UBDP1-202ENST00000457888 KRTAP3-3Q9BYR6 98 aa11.6□□□□□ -0.55
UBDP1-202ENST00000457888 KRTAP3-2Q9BYR7 98 aa11.6□□□□□ -0.55
UBDP1-202ENST00000457888 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
UBDP1-202ENST00000457888 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
UBDP1-202ENST00000457888 ZNF710Q8N1W2 664 aa11.56□□□□□ -0.56
UBDP1-202ENST00000457888 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
UBDP1-202ENST00000457888 DOK7Q18PE1 504 aa11.54□□□□□ -0.56
UBDP1-202ENST00000457888 ERBB3P21860 1342 aa11.48□□□□□ -0.57
UBDP1-202ENST00000457888 RIMBP2O15034 1052 aa11.47□□□□□ -0.57
UBDP1-202ENST00000457888 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
UBDP1-202ENST00000457888 RIOK3O14730 519 aaKnown RBP11.45□□□□□ -0.58
UBDP1-202ENST00000457888 SOX12O15370 315 aa11.45□□□□□ -0.58
UBDP1-202ENST00000457888 TMEM92Q6UXU6 159 aa11.43□□□□□ -0.58
UBDP1-202ENST00000457888 RNF25Q96BH1 459 aaPredicted RBP11.42□□□□□ -0.58
UBDP1-202ENST00000457888 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.41□□□□□ -0.58
UBDP1-202ENST00000457888 VGFO15240 615 aaPredicted RBP11.41□□□□□ -0.58
UBDP1-202ENST00000457888 ZFP91Q96JP5 570 aaPredicted RBP11.41□□□□□ -0.58
UBDP1-202ENST00000457888 ZSWIM6Q9HCJ5 1215 aa11.41□□□□□ -0.58
UBDP1-202ENST00000457888 VARS2Q5ST30 1063 aaKnown RBP11.4□□□□□ -0.58
UBDP1-202ENST00000457888 MS4A4AQ96JQ5 239 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms