RNA–Protein interactions for RNA: ENST00000457435.1

LINC01546-201, Transcript of long intergenic non-protein coding RNA 1546, humanhuman

TSL 2 BASIC

Gene LINC01546, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546-201ENST00000457435 CCDC61Q9Y6R9 512 aa12.08□□□□□ -0.48
LINC01546-201ENST00000457435 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
LINC01546-201ENST00000457435 ATMINO43313 823 aaPredicted RBP12.04□□□□□ -0.48
LINC01546-201ENST00000457435 KIF12Q96FN5 646 aa12.04□□□□□ -0.48
LINC01546-201ENST00000457435 ASTLQ6HA08 431 aaPredicted RBP12.03□□□□□ -0.48
LINC01546-201ENST00000457435 ZBTB47Q9UFB7 747 aaPredicted RBP12.02□□□□□ -0.49
LINC01546-201ENST00000457435 POTEB2H3BUK9 544 aa12.01□□□□□ -0.49
LINC01546-201ENST00000457435 METRNQ9UJH8 293 aa12□□□□□ -0.49
LINC01546-201ENST00000457435 MAP3K13O43283 966 aa11.99□□□□□ -0.49
LINC01546-201ENST00000457435 SLC39A7Q92504 469 aa11.99□□□□□ -0.49
LINC01546-201ENST00000457435 C7P10643 843 aa11.98□□□□□ -0.49
LINC01546-201ENST00000457435 OTUD5Q96G74 571 aa11.98□□□□□ -0.49
LINC01546-201ENST00000457435 ATN1P54259 1190 aaPredicted RBP11.95□□□□□ -0.5
LINC01546-201ENST00000457435 TRPC6Q9Y210 931 aa11.93□□□□□ -0.5
LINC01546-201ENST00000457435 NUBP1P53384 320 aa11.92□□□□□ -0.5
LINC01546-201ENST00000457435 BMP2KQ9NSY1 1161 aaPredicted RBP11.92□□□□□ -0.5
LINC01546-201ENST00000457435 FAM212AQ96EL1 285 aa11.9□□□□□ -0.5
LINC01546-201ENST00000457435 FBXO3Q9UK99 471 aa11.89□□□□□ -0.51
LINC01546-201ENST00000457435 PCDHB13Q9Y5F0 798 aa11.89□□□□□ -0.51
LINC01546-201ENST00000457435 TIE1P35590 1138 aa11.88□□□□□ -0.51
LINC01546-201ENST00000457435 DCAF8Q5TAQ9 597 aa11.85□□□□□ -0.51
LINC01546-201ENST00000457435 MAMSTRQ6ZN01 415 aa11.85□□□□□ -0.51
LINC01546-201ENST00000457435 TTLL13PA6NNM8 815 aa11.83□□□□□ -0.52
LINC01546-201ENST00000457435 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
LINC01546-201ENST00000457435 POTEJP0CG39 1038 aa11.82□□□□□ -0.52
LINC01546-201ENST00000457435 SEC24BO95487 1268 aa11.81□□□□□ -0.52
LINC01546-201ENST00000457435 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
LINC01546-201ENST00000457435 IFNL1Q8IU54 200 aa11.79□□□□□ -0.52
LINC01546-201ENST00000457435 SCUBE2Q9NQ36 999 aa11.79□□□□□ -0.52
LINC01546-201ENST00000457435 TRIM35Q9UPQ4 493 aa11.77□□□□□ -0.53
LINC01546-201ENST00000457435 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
LINC01546-201ENST00000457435 TMEM106CQ9BVX2 250 aa11.75□□□□□ -0.53
LINC01546-201ENST00000457435 PYGBP11216 843 aa11.74□□□□□ -0.53
LINC01546-201ENST00000457435 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
LINC01546-201ENST00000457435 VASPP50552 380 aaPredicted RBP11.72□□□□□ -0.53
LINC01546-201ENST00000457435 PLSCR2Q9NRY7 297 aa11.72□□□□□ -0.53
LINC01546-201ENST00000457435 IER5LQ5T953 404 aa11.7□□□□□ -0.54
LINC01546-201ENST00000457435 POTEMA6NI47 508 aa11.69□□□□□ -0.54
LINC01546-201ENST00000457435 FAM163AQ96GL9 167 aaPredicted RBP11.69□□□□□ -0.54
LINC01546-201ENST00000457435 POTEGQ6S5H5 508 aa11.67□□□□□ -0.54
LINC01546-201ENST00000457435 PCDHB8Q9UN66 801 aa11.67□□□□□ -0.54
LINC01546-201ENST00000457435 PLCG2P16885 1265 aa11.64□□□□□ -0.55
LINC01546-201ENST00000457435 GSE1Q14687 1217 aa11.64□□□□□ -0.55
LINC01546-201ENST00000457435 ZNF467Q7Z7K2 595 aaPredicted RBP11.55□□□□□ -0.56
LINC01546-201ENST00000457435 SLAIN1Q8ND83 568 aa11.55□□□□□ -0.56
LINC01546-201ENST00000457435 OCEL1Q9H607 264 aa11.55□□□□□ -0.56
LINC01546-201ENST00000457435 IRX5P78411 483 aaPredicted RBP11.54□□□□□ -0.56
LINC01546-201ENST00000457435 CIZ1Q9ULV3 898 aaPredicted RBP11.53□□□□□ -0.56
LINC01546-201ENST00000457435 GOLGA2Q08379 1002 aa11.52□□□□□ -0.57
LINC01546-201ENST00000457435 SPOCK2Q92563 424 aa11.52□□□□□ -0.57
LINC01546-201ENST00000457435 LCE2DQ5TA82 110 aaPredicted RBP11.51□□□□□ -0.57
LINC01546-201ENST00000457435 CHRM1P11229 460 aaPredicted RBP11.5□□□□□ -0.57
LINC01546-201ENST00000457435 IFNLR1Q8IU57 520 aaPredicted RBP11.5□□□□□ -0.57
LINC01546-201ENST00000457435 PSEN1P49768 467 aa11.48□□□□□ -0.57
LINC01546-201ENST00000457435 MKRN3Q13064 507 aaKnown RBP11.48□□□□□ -0.57
LINC01546-201ENST00000457435 PCDH10Q9P2E7 1040 aa11.48□□□□□ -0.57
LINC01546-201ENST00000457435 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.43□□□□□ -0.58
LINC01546-201ENST00000457435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.41□□□□□ -0.58
LINC01546-201ENST00000457435 PDAP1Q13442 181 aaKnown RBP11.4□□□□□ -0.58
LINC01546-201ENST00000457435 ST18O60284 1047 aa11.37□□□□□ -0.59
LINC01546-201ENST00000457435 L3MBTL3Q96JM7 780 aaPredicted RBP11.37□□□□□ -0.59
LINC01546-201ENST00000457435 C3orf67Q6ZVT6 689 aa11.36□□□□□ -0.59
LINC01546-201ENST00000457435 PDCD7Q8N8D1 485 aaKnown RBP11.36□□□□□ -0.59
LINC01546-201ENST00000457435 SNPHO15079 494 aa11.34□□□□□ -0.59
LINC01546-201ENST00000457435 CABP2Q9NPB3 220 aa11.34□□□□□ -0.59
LINC01546-201ENST00000457435 CDAN1Q8IWY9 1227 aa11.32□□□□□ -0.6
LINC01546-201ENST00000457435 G3V3G9 751 aa11.28□□□□□ -0.6
LINC01546-201ENST00000457435 DPY19L2Q6NUT2 758 aa11.27□□□□□ -0.61
LINC01546-201ENST00000457435 TRIM41Q8WV44 630 aa11.27□□□□□ -0.61
LINC01546-201ENST00000457435 MARVELD3Q96A59 401 aa11.24□□□□□ -0.61
LINC01546-201ENST00000457435 TMEM121BQ9BXQ6 578 aaPredicted RBP11.23□□□□□ -0.61
LINC01546-201ENST00000457435 ILDR1Q86SU0 546 aaPredicted RBP11.21□□□□□ -0.61
LINC01546-201ENST00000457435 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
LINC01546-201ENST00000457435 EFCAB3Q8N7B9 438 aa11.19□□□□□ -0.62
LINC01546-201ENST00000457435 RIOK3O14730 519 aaKnown RBP11.15□□□□□ -0.62
LINC01546-201ENST00000457435 EMP3P54852 163 aa11.15□□□□□ -0.62
LINC01546-201ENST00000457435 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
LINC01546-201ENST00000457435 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
LINC01546-201ENST00000457435 VGFO15240 615 aaPredicted RBP11.09□□□□□ -0.63
LINC01546-201ENST00000457435 RNF25Q96BH1 459 aaPredicted RBP11.09□□□□□ -0.63
LINC01546-201ENST00000457435 FAM205CA6NFA0 338 aa11.08□□□□□ -0.64
LINC01546-201ENST00000457435 ZNF710Q8N1W2 664 aa11.07□□□□□ -0.64
LINC01546-201ENST00000457435 SOX12O15370 315 aa11.06□□□□□ -0.64
LINC01546-201ENST00000457435 SPNS2Q8IVW8 549 aa11.03□□□□□ -0.64
LINC01546-201ENST00000457435 HS3ST6Q96QI5 342 aa11.03□□□□□ -0.64
LINC01546-201ENST00000457435 PHF8Q9UPP1 1060 aa11.03□□□□□ -0.64
LINC01546-201ENST00000457435 HOXB3P14651 431 aaPredicted RBP11.02□□□□□ -0.65
LINC01546-201ENST00000457435 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
LINC01546-201ENST00000457435 MICALL2Q8IY33 904 aa11.02□□□□□ -0.65
LINC01546-201ENST00000457435 TAOK2Q9UL54 1235 aa11.01□□□□□ -0.65
LINC01546-201ENST00000457435 POTEB3A0JP26 581 aa11□□□□□ -0.65
LINC01546-201ENST00000457435 POTEBQ6S5H4 581 aa11□□□□□ -0.65
LINC01546-201ENST00000457435 MMRN1Q13201 1228 aa10.99□□□□□ -0.65
LINC01546-201ENST00000457435 RIMBP2O15034 1052 aa10.98□□□□□ -0.65
LINC01546-201ENST00000457435 MS4A4AQ96JQ5 239 aa10.98□□□□□ -0.65
LINC01546-201ENST00000457435 BCL11BQ9C0K0 894 aaPredicted RBP10.98□□□□□ -0.65
LINC01546-201ENST00000457435 STK24Q9Y6E0 443 aa10.98□□□□□ -0.65
LINC01546-201ENST00000457435 ECM2O94769 699 aaPredicted RBP10.96□□□□□ -0.65
LINC01546-201ENST00000457435 HOXB1P14653 301 aaPredicted RBP10.96□□□□□ -0.65
LINC01546-201ENST00000457435 NLRP6P59044 892 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms