RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 ZNF692Q9BU19 519 aaPredicted RBP4.33□□□□□ -1.72
NEDD1-204ENST00000457368 CHADLQ6NUI6 762 aa4.32□□□□□ -1.72
NEDD1-204ENST00000457368 FANCD2Q9BXW9 1451 aa4.32□□□□□ -1.72
NEDD1-204ENST00000457368 CFTRP13569 1480 aa4.31□□□□□ -1.72
NEDD1-204ENST00000457368 AKT1S1Q96B36 256 aa4.31□□□□□ -1.72
NEDD1-204ENST00000457368 MROH2BQ7Z745 1585 aa4.31□□□□□ -1.72
NEDD1-204ENST00000457368 PIP4P2Q8N4L2 257 aa4.3□□□□□ -1.72
NEDD1-204ENST00000457368 RSF1Q96T23 1441 aaPredicted RBP4.3□□□□□ -1.72
NEDD1-204ENST00000457368 CSRNP3Q8WYN3 585 aa4.3□□□□□ -1.72
NEDD1-204ENST00000457368 PLSCR2Q9NRY7 297 aa4.3□□□□□ -1.72
NEDD1-204ENST00000457368 URB2Q14146 1524 aaKnown RBP4.29□□□□□ -1.72
NEDD1-204ENST00000457368 MKRN4PQ13434 485 aaPredicted RBP4.29□□□□□ -1.72
NEDD1-204ENST00000457368 IFT140Q96RY7 1462 aa4.29□□□□□ -1.72
NEDD1-204ENST00000457368 ARAP1Q96P48 1450 aa4.29□□□□□ -1.72
NEDD1-204ENST00000457368 PRKAR2AP13861 404 aaKnown RBP4.28□□□□□ -1.72
NEDD1-204ENST00000457368 EVX2Q03828 476 aa4.26□□□□□ -1.73
NEDD1-204ENST00000457368 CYB5RLQ6IPT4 315 aa4.26□□□□□ -1.73
NEDD1-204ENST00000457368 ZNF608Q9ULD9 1512 aaPredicted RBP4.25□□□□□ -1.73
NEDD1-204ENST00000457368 SPDYE2BA6NHP3 402 aa4.25□□□□□ -1.73
NEDD1-204ENST00000457368 SPDYE6P0CI01 402 aa4.25□□□□□ -1.73
NEDD1-204ENST00000457368 SPDYE2Q495Y8 402 aa4.25□□□□□ -1.73
NEDD1-204ENST00000457368 ABCC8Q09428 1581 aa4.24□□□□□ -1.73
NEDD1-204ENST00000457368 PRR29P0C7W0 189 aa4.22□□□□□ -1.73
NEDD1-204ENST00000457368 SPDYE1Q8NFV5 336 aaPredicted RBP4.22□□□□□ -1.73
NEDD1-204ENST00000457368 ATXN8OSP0DMR3 200 aa4.22□□□□□ -1.73
NEDD1-204ENST00000457368 CLASP1Q7Z460 1538 aa4.22□□□□□ -1.73
NEDD1-204ENST00000457368 TOPBP1Q92547 1522 aa4.22□□□□□ -1.73
NEDD1-204ENST00000457368 LHX8Q68G74 356 aa4.22□□□□□ -1.73
NEDD1-204ENST00000457368 EIF4G3O43432 1585 aaKnown RBP4.21□□□□□ -1.73
NEDD1-204ENST00000457368 WDR97A6NE52 1622 aa4.21□□□□□ -1.74
NEDD1-204ENST00000457368 TOP2AP11388 1531 aaKnown RBP4.21□□□□□ -1.74
NEDD1-204ENST00000457368 WIZO95785 1651 aa4.2□□□□□ -1.74
NEDD1-204ENST00000457368 TARBP1Q13395 1621 aaKnown RBP4.2□□□□□ -1.74
NEDD1-204ENST00000457368 DNMBPQ6XZF7 1577 aa4.19□□□□□ -1.74
NEDD1-204ENST00000457368 PRDM2Q13029 1718 aa4.19□□□□□ -1.74
NEDD1-204ENST00000457368 CHD1O14646 1710 aa4.19□□□□□ -1.74
NEDD1-204ENST00000457368 AQRO60306 1485 aaKnown RBP eCLIP4.18□□□□□ -1.74
NEDD1-204ENST00000457368 MAGI1Q96QZ7 1491 aaPredicted RBP4.18□□□□□ -1.74
NEDD1-204ENST00000457368 FXR2P51116 673 aaKnown RBP eCLIP4.17□□□□□ -1.74
NEDD1-204ENST00000457368 SYNJ1O43426 1573 aa4.17□□□□□ -1.74
NEDD1-204ENST00000457368 GAPVD1Q14C86 1478 aa4.16□□□□□ -1.74
NEDD1-204ENST00000457368 POLA1P09884 1462 aaPredicted RBP4.16□□□□□ -1.74
NEDD1-204ENST00000457368 ILDR1Q86SU0 546 aaPredicted RBP4.15□□□□□ -1.74
NEDD1-204ENST00000457368 SYNJ2O15056 1496 aa4.15□□□□□ -1.75
NEDD1-204ENST00000457368 SNAPC4Q5SXM2 1469 aa4.14□□□□□ -1.75
NEDD1-204ENST00000457368 SSUH2Q9Y2M2 353 aa4.14□□□□□ -1.75
NEDD1-204ENST00000457368 CCDC88BA6NC98 1476 aa4.14□□□□□ -1.75
NEDD1-204ENST00000457368 GRIN2BQ13224 1484 aa4.14□□□□□ -1.75
NEDD1-204ENST00000457368 SPDYE4A6NLX3 237 aa4.14□□□□□ -1.75
NEDD1-204ENST00000457368 CD44P16070 742 aaKnown RBP4.14□□□□□ -1.75
NEDD1-204ENST00000457368 SOGA1O94964 1423 aa4.13□□□□□ -1.75
NEDD1-204ENST00000457368 CHMP7Q8WUX9 453 aaPredicted RBP4.12□□□□□ -1.75
NEDD1-204ENST00000457368 TDRD9Q8NDG6 1382 aaKnown RBP4.11□□□□□ -1.75
NEDD1-204ENST00000457368 RAD54L2Q9Y4B4 1467 aa4.11□□□□□ -1.75
NEDD1-204ENST00000457368 CLCN6P51797 869 aa4.11□□□□□ -1.75
NEDD1-204ENST00000457368 NUP160Q12769 1436 aa4.11□□□□□ -1.75
NEDD1-204ENST00000457368 KDM4FA0A1W2PPD8 638 aa4.11□□□□□ -1.75
NEDD1-204ENST00000457368 GABBR2O75899 941 aa4.1□□□□□ -1.75
NEDD1-204ENST00000457368 FARP1Q9Y4F1 1045 aaPredicted RBP4.1□□□□□ -1.75
NEDD1-204ENST00000457368 ABCC10Q5T3U5 1492 aa4.1□□□□□ -1.75
NEDD1-204ENST00000457368 SHROOM2Q13796 1616 aa4.09□□□□□ -1.75
NEDD1-204ENST00000457368 ZRANB1Q9UGI0 708 aa4.09□□□□□ -1.75
NEDD1-204ENST00000457368 FGD5Q6ZNL6 1462 aa4.09□□□□□ -1.75
NEDD1-204ENST00000457368 MAPKBP1O60336 1514 aa4.09□□□□□ -1.76
NEDD1-204ENST00000457368 TSPYL2Q9H2G4 693 aaPredicted RBP4.08□□□□□ -1.76
NEDD1-204ENST00000457368 CEP170Q5SW79 1584 aa4.08□□□□□ -1.76
NEDD1-204ENST00000457368 ABCA10Q8WWZ4 1543 aa4.08□□□□□ -1.76
NEDD1-204ENST00000457368 KIF13AQ9H1H9 1805 aa4.08□□□□□ -1.76
NEDD1-204ENST00000457368 DCBLD2Q96PD2 775 aa4.08□□□□□ -1.76
NEDD1-204ENST00000457368 GRIN2AQ12879 1464 aa4.08□□□□□ -1.76
NEDD1-204ENST00000457368 ERCC6L2Q5T890 1561 aa4.07□□□□□ -1.76
NEDD1-204ENST00000457368 CUX1P39880 1505 aa4.07□□□□□ -1.76
NEDD1-204ENST00000457368 ABCA5Q8WWZ7 1642 aa4.06□□□□□ -1.76
NEDD1-204ENST00000457368 PHF12Q96QT6 1004 aa4.06□□□□□ -1.76
NEDD1-204ENST00000457368 DIP2BQ9P265 1576 aa4.06□□□□□ -1.76
NEDD1-204ENST00000457368 FHAD1B1AJZ9 1412 aa4.05□□□□□ -1.76
NEDD1-204ENST00000457368 PBRM1Q86U86 1689 aa4.04□□□□□ -1.76
NEDD1-204ENST00000457368 ADAMTS12P58397 1594 aa4.04□□□□□ -1.76
NEDD1-204ENST00000457368 C19orf67A6NJJ6 358 aa4.04□□□□□ -1.76
NEDD1-204ENST00000457368 GALR2O43603 387 aaPredicted RBP4.04□□□□□ -1.76
NEDD1-204ENST00000457368 MIER1Q8N108 512 aa4.04□□□□□ -1.76
NEDD1-204ENST00000457368 KDM6BO15054 1643 aa4.04□□□□□ -1.76
NEDD1-204ENST00000457368 FAM69CQ0P6D2 419 aa4.04□□□□□ -1.76
NEDD1-204ENST00000457368 FBXO41Q8TF61 875 aa4.04□□□□□ -1.76
NEDD1-204ENST00000457368 PAK3O75914 559 aaPredicted RBP4.03□□□□□ -1.76
NEDD1-204ENST00000457368 PLCD3Q8N3E9 789 aa4.03□□□□□ -1.76
NEDD1-204ENST00000457368 PRG4Q92954 1404 aaPredicted RBP4.02□□□□□ -1.77
NEDD1-204ENST00000457368 ADGRL1O94910 1474 aa4.02□□□□□ -1.77
NEDD1-204ENST00000457368 GLI2P10070 1586 aa4.02□□□□□ -1.77
NEDD1-204ENST00000457368 FKBP8Q14318 412 aa4.02□□□□□ -1.77
NEDD1-204ENST00000457368 ERICH3Q5RHP9 1530 aa4.02□□□□□ -1.77
NEDD1-204ENST00000457368 HECW2Q9P2P5 1572 aa4.02□□□□□ -1.77
NEDD1-204ENST00000457368 NPM1P06748 294 aaKnown RBP eCLIP4.01□□□□□ -1.77
NEDD1-204ENST00000457368 JPH4Q96JJ6 628 aa4.01□□□□□ -1.77
NEDD1-204ENST00000457368 CREBZFQ9NS37 354 aa4.01□□□□□ -1.77
NEDD1-204ENST00000457368 ADCY10Q96PN6 1610 aa4□□□□□ -1.77
NEDD1-204ENST00000457368 IGSF5Q9NSI5 407 aa4□□□□□ -1.77
NEDD1-204ENST00000457368 WRNQ14191 1432 aaPredicted RBP eCLIP4□□□□□ -1.77
NEDD1-204ENST00000457368 STAG3Q9UJ98 1225 aa4□□□□□ -1.77
NEDD1-204ENST00000457368 POTEIP0CG38 1075 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms