RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 LCE2DQ5TA82 110 aaPredicted RBP15.14■□□□□ 0.01
COMMD3-204ENST00000456711 ASTLQ6HA08 431 aaPredicted RBP15.13■□□□□ 0.01
COMMD3-204ENST00000456711 MS4A3Q96HJ5 214 aa15.13■□□□□ 0.01
COMMD3-204ENST00000456711 ATMINO43313 823 aaPredicted RBP15.1■□□□□ 0.01
COMMD3-204ENST00000456711 PCDH10Q9P2E7 1040 aa15.08■□□□□ 0
COMMD3-204ENST00000456711 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
COMMD3-204ENST00000456711 SLC39A7Q92504 469 aa15.06■□□□□ 0
COMMD3-204ENST00000456711 C7P10643 843 aa15.04■□□□□ -0
COMMD3-204ENST00000456711 SPDYE4A6NLX3 237 aa15.02■□□□□ -0
COMMD3-204ENST00000456711 FAM163AQ96GL9 167 aaPredicted RBP15□□□□□ -0.01
COMMD3-204ENST00000456711 MAMSTRQ6ZN01 415 aa14.96□□□□□ -0.01
COMMD3-204ENST00000456711 ATN1P54259 1190 aaPredicted RBP14.95□□□□□ -0.02
COMMD3-204ENST00000456711 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
COMMD3-204ENST00000456711 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
COMMD3-204ENST00000456711 POTEFA5A3E0 1075 aa14.91□□□□□ -0.02
COMMD3-204ENST00000456711 TSPYL2Q9H2G4 693 aaPredicted RBP14.88□□□□□ -0.03
COMMD3-204ENST00000456711 SCUBE2Q9NQ36 999 aa14.88□□□□□ -0.03
COMMD3-204ENST00000456711 TRPC6Q9Y210 931 aa14.84□□□□□ -0.03
COMMD3-204ENST00000456711 CCDC61Q9Y6R9 512 aa14.84□□□□□ -0.03
COMMD3-204ENST00000456711 BMP2KQ9NSY1 1161 aaPredicted RBP14.81□□□□□ -0.04
COMMD3-204ENST00000456711 KIF12Q96FN5 646 aa14.79□□□□□ -0.04
COMMD3-204ENST00000456711 COLQQ9Y215 455 aaPredicted RBP14.72□□□□□ -0.05
COMMD3-204ENST00000456711 CDAN1Q8IWY9 1227 aa14.7□□□□□ -0.06
COMMD3-204ENST00000456711 MAP3K13O43283 966 aa14.68□□□□□ -0.06
COMMD3-204ENST00000456711 TIE1P35590 1138 aa14.64□□□□□ -0.07
COMMD3-204ENST00000456711 NACADO15069 1562 aa14.62□□□□□ -0.07
COMMD3-204ENST00000456711 UNC13AQ9UPW8 1703 aa14.61□□□□□ -0.07
COMMD3-204ENST00000456711 TTLL13PA6NNM8 815 aa14.6□□□□□ -0.07
COMMD3-204ENST00000456711 SEC24BO95487 1268 aa14.59□□□□□ -0.07
COMMD3-204ENST00000456711 CECR2Q9BXF3 1484 aa14.58□□□□□ -0.08
COMMD3-204ENST00000456711 RASEFQ8IZ41 740 aa14.58□□□□□ -0.08
COMMD3-204ENST00000456711 PROM2Q8N271 834 aa14.56□□□□□ -0.08
COMMD3-204ENST00000456711 ST18O60284 1047 aa14.54□□□□□ -0.08
COMMD3-204ENST00000456711 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
COMMD3-204ENST00000456711 TRIM35Q9UPQ4 493 aa14.51□□□□□ -0.09
COMMD3-204ENST00000456711 CC2D2AQ9P2K1 1620 aa14.5□□□□□ -0.09
COMMD3-204ENST00000456711 SLAIN1Q8ND83 568 aa14.48□□□□□ -0.09
COMMD3-204ENST00000456711 IER5LQ5T953 404 aa14.45□□□□□ -0.1
COMMD3-204ENST00000456711 MMRN1Q13201 1228 aa14.41□□□□□ -0.1
COMMD3-204ENST00000456711 MIER1Q8N108 512 aa14.4□□□□□ -0.1
COMMD3-204ENST00000456711 PCDHB13Q9Y5F0 798 aa14.4□□□□□ -0.1
COMMD3-204ENST00000456711 SPNS2Q8IVW8 549 aa14.38□□□□□ -0.11
COMMD3-204ENST00000456711 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
COMMD3-204ENST00000456711 IFNL1Q8IU54 200 aa14.34□□□□□ -0.11
COMMD3-204ENST00000456711 SGIP1Q9BQI5 828 aa14.34□□□□□ -0.11
COMMD3-204ENST00000456711 DCAF8L2P0C7V8 631 aa14.32□□□□□ -0.12
COMMD3-204ENST00000456711 PLEKHG5O94827 1062 aa14.31□□□□□ -0.12
COMMD3-204ENST00000456711 TMEM106CQ9BVX2 250 aa14.3□□□□□ -0.12
COMMD3-204ENST00000456711 PLCG2P16885 1265 aa14.28□□□□□ -0.12
COMMD3-204ENST00000456711 IRX5P78411 483 aaPredicted RBP14.27□□□□□ -0.13
COMMD3-204ENST00000456711 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
COMMD3-204ENST00000456711 NUBP1P53384 320 aa14.25□□□□□ -0.13
COMMD3-204ENST00000456711 MARVELD3Q96A59 401 aa14.25□□□□□ -0.13
COMMD3-204ENST00000456711 EIF4G1Q04637 1599 aaKnown RBP14.25□□□□□ -0.13
COMMD3-204ENST00000456711 CUX2O14529 1486 aa14.25□□□□□ -0.13
COMMD3-204ENST00000456711 TMEM121BQ9BXQ6 578 aaPredicted RBP14.22□□□□□ -0.13
COMMD3-204ENST00000456711 PLCD3Q8N3E9 789 aa14.18□□□□□ -0.14
COMMD3-204ENST00000456711 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
COMMD3-204ENST00000456711 OCEL1Q9H607 264 aa14.14□□□□□ -0.15
COMMD3-204ENST00000456711 MYO15BQ96JP2 1530 aa14.14□□□□□ -0.15
COMMD3-204ENST00000456711 SNPHO15079 494 aa14.1□□□□□ -0.15
COMMD3-204ENST00000456711 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.1□□□□□ -0.15
COMMD3-204ENST00000456711 POTEB3A0JP26 581 aa14.07□□□□□ -0.16
COMMD3-204ENST00000456711 POTEBQ6S5H4 581 aa14.07□□□□□ -0.16
COMMD3-204ENST00000456711 FAM212AQ96EL1 285 aa14.07□□□□□ -0.16
COMMD3-204ENST00000456711 KRTAP3-3Q9BYR6 98 aa14.05□□□□□ -0.16
COMMD3-204ENST00000456711 KRTAP3-2Q9BYR7 98 aa14.05□□□□□ -0.16
COMMD3-204ENST00000456711 ZBTB47Q9UFB7 747 aaPredicted RBP14.02□□□□□ -0.17
COMMD3-204ENST00000456711 EMP3P54852 163 aa14.01□□□□□ -0.17
COMMD3-204ENST00000456711 PCDHB8Q9UN66 801 aa14□□□□□ -0.17
COMMD3-204ENST00000456711 PYGBP11216 843 aa13.99□□□□□ -0.17
COMMD3-204ENST00000456711 PDCD7Q8N8D1 485 aaKnown RBP13.97□□□□□ -0.17
COMMD3-204ENST00000456711 HS3ST6Q96QI5 342 aa13.97□□□□□ -0.17
COMMD3-204ENST00000456711 ERCC6Q03468 1493 aa13.94□□□□□ -0.18
COMMD3-204ENST00000456711 FAM205CA6NFA0 338 aa13.94□□□□□ -0.18
COMMD3-204ENST00000456711 DCAF8Q5TAQ9 597 aa13.9□□□□□ -0.18
COMMD3-204ENST00000456711 C3orf67Q6ZVT6 689 aa13.9□□□□□ -0.18
COMMD3-204ENST00000456711 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
COMMD3-204ENST00000456711 L3MBTL3Q96JM7 780 aaPredicted RBP13.81□□□□□ -0.2
COMMD3-204ENST00000456711 MKRN3Q13064 507 aaKnown RBP13.77□□□□□ -0.21
COMMD3-204ENST00000456711 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.21
COMMD3-204ENST00000456711 HOXB3P14651 431 aaPredicted RBP13.73□□□□□ -0.21
COMMD3-204ENST00000456711 GOLGA2Q08379 1002 aa13.73□□□□□ -0.21
COMMD3-204ENST00000456711 DPY19L2Q6NUT2 758 aa13.73□□□□□ -0.21
COMMD3-204ENST00000456711 ILDR1Q86SU0 546 aaPredicted RBP13.68□□□□□ -0.22
COMMD3-204ENST00000456711 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
COMMD3-204ENST00000456711 PSEN1P49768 467 aa13.65□□□□□ -0.22
COMMD3-204ENST00000456711 RNF166Q96A37 237 aaPredicted RBP13.64□□□□□ -0.23
COMMD3-204ENST00000456711 DCAF1Q9Y4B6 1507 aa13.63□□□□□ -0.23
COMMD3-204ENST00000456711 THOC2Q8NI27 1593 aaKnown RBP13.62□□□□□ -0.23
COMMD3-204ENST00000456711 HOXB1P14653 301 aaPredicted RBP13.62□□□□□ -0.23
COMMD3-204ENST00000456711 ERBB3P21860 1342 aa13.59□□□□□ -0.23
COMMD3-204ENST00000456711 FKBP8Q14318 412 aa13.57□□□□□ -0.24
COMMD3-204ENST00000456711 BOLA1Q9Y3E2 137 aa13.57□□□□□ -0.24
COMMD3-204ENST00000456711 NESP48681 1621 aa13.57□□□□□ -0.24
COMMD3-204ENST00000456711 ZNF710Q8N1W2 664 aa13.56□□□□□ -0.24
COMMD3-204ENST00000456711 CHRM1P11229 460 aaPredicted RBP13.55□□□□□ -0.24
COMMD3-204ENST00000456711 GSE1Q14687 1217 aa13.55□□□□□ -0.24
COMMD3-204ENST00000456711 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
COMMD3-204ENST00000456711 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms