RNA–Protein interactions for RNA: ENST00000456514.1

LINC00601-201, long intergenic non-protein coding RNA 601, humanhuman

TSL 3 BASIC

Gene LINC00601, Length 1,168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00601-201ENST00000456514 METRNQ9UJH8 293 aa14.63□□□□□ -0.07
LINC00601-201ENST00000456514 ATMINO43313 823 aaPredicted RBP14.62□□□□□ -0.07
LINC00601-201ENST00000456514 PLSCR2Q9NRY7 297 aa14.62□□□□□ -0.07
LINC00601-201ENST00000456514 SLC39A7Q92504 469 aa14.61□□□□□ -0.07
LINC00601-201ENST00000456514 C7P10643 843 aa14.6□□□□□ -0.07
LINC00601-201ENST00000456514 MIER1Q8N108 512 aa14.6□□□□□ -0.07
LINC00601-201ENST00000456514 CCDC61Q9Y6R9 512 aa14.59□□□□□ -0.07
LINC00601-201ENST00000456514 KIF12Q96FN5 646 aa14.54□□□□□ -0.08
LINC00601-201ENST00000456514 ATN1P54259 1190 aaPredicted RBP14.5□□□□□ -0.09
LINC00601-201ENST00000456514 MAMSTRQ6ZN01 415 aa14.49□□□□□ -0.09
LINC00601-201ENST00000456514 POTEMA6NI47 508 aa14.46□□□□□ -0.09
LINC00601-201ENST00000456514 RASEFQ8IZ41 740 aa14.46□□□□□ -0.09
LINC00601-201ENST00000456514 PLCD3Q8N3E9 789 aa14.46□□□□□ -0.09
LINC00601-201ENST00000456514 MAP3K13O43283 966 aa14.45□□□□□ -0.1
LINC00601-201ENST00000456514 BMP2KQ9NSY1 1161 aaPredicted RBP14.44□□□□□ -0.1
LINC00601-201ENST00000456514 POTEJP0CG39 1038 aa14.43□□□□□ -0.1
LINC00601-201ENST00000456514 POTEGQ6S5H5 508 aa14.42□□□□□ -0.1
LINC00601-201ENST00000456514 SCUBE2Q9NQ36 999 aa14.41□□□□□ -0.1
LINC00601-201ENST00000456514 TRPC6Q9Y210 931 aa14.41□□□□□ -0.1
LINC00601-201ENST00000456514 TIE1P35590 1138 aa14.4□□□□□ -0.1
LINC00601-201ENST00000456514 ZBTB47Q9UFB7 747 aaPredicted RBP14.36□□□□□ -0.11
LINC00601-201ENST00000456514 TTLL13PA6NNM8 815 aa14.31□□□□□ -0.12
LINC00601-201ENST00000456514 SEC24BO95487 1268 aa14.31□□□□□ -0.12
LINC00601-201ENST00000456514 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
LINC00601-201ENST00000456514 POTEFA5A3E0 1075 aa14.29□□□□□ -0.12
LINC00601-201ENST00000456514 FAM163AQ96GL9 167 aaPredicted RBP14.29□□□□□ -0.12
LINC00601-201ENST00000456514 SGIP1Q9BQI5 828 aa14.28□□□□□ -0.12
LINC00601-201ENST00000456514 NUBP1P53384 320 aa14.25□□□□□ -0.13
LINC00601-201ENST00000456514 FAM212AQ96EL1 285 aa14.24□□□□□ -0.13
LINC00601-201ENST00000456514 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
LINC00601-201ENST00000456514 TRIM35Q9UPQ4 493 aa14.24□□□□□ -0.13
LINC00601-201ENST00000456514 COLQQ9Y215 455 aaPredicted RBP14.23□□□□□ -0.13
LINC00601-201ENST00000456514 FKBP8Q14318 412 aa14.22□□□□□ -0.13
LINC00601-201ENST00000456514 IER5LQ5T953 404 aa14.2□□□□□ -0.14
LINC00601-201ENST00000456514 IFNL1Q8IU54 200 aa14.18□□□□□ -0.14
LINC00601-201ENST00000456514 LCE2DQ5TA82 110 aaPredicted RBP14.16□□□□□ -0.14
LINC00601-201ENST00000456514 TMEM106CQ9BVX2 250 aa14.14□□□□□ -0.15
LINC00601-201ENST00000456514 DCAF8Q5TAQ9 597 aa14.09□□□□□ -0.15
LINC00601-201ENST00000456514 PLCG2P16885 1265 aa14.08□□□□□ -0.16
LINC00601-201ENST00000456514 SLAIN1Q8ND83 568 aa14.04□□□□□ -0.16
LINC00601-201ENST00000456514 PYGBP11216 843 aa14.03□□□□□ -0.16
LINC00601-201ENST00000456514 FBXO3Q9UK99 471 aa14.03□□□□□ -0.16
LINC00601-201ENST00000456514 IRX5P78411 483 aaPredicted RBP13.97□□□□□ -0.17
LINC00601-201ENST00000456514 OCEL1Q9H607 264 aa13.95□□□□□ -0.18
LINC00601-201ENST00000456514 PCDHB8Q9UN66 801 aa13.95□□□□□ -0.18
LINC00601-201ENST00000456514 KLHL34Q8N239 644 aa13.93□□□□□ -0.18
LINC00601-201ENST00000456514 CDAN1Q8IWY9 1227 aa13.92□□□□□ -0.18
LINC00601-201ENST00000456514 ST18O60284 1047 aa13.89□□□□□ -0.19
LINC00601-201ENST00000456514 GSE1Q14687 1217 aa13.87□□□□□ -0.19
LINC00601-201ENST00000456514 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.85□□□□□ -0.19
LINC00601-201ENST00000456514 VASPP50552 380 aaPredicted RBP13.84□□□□□ -0.19
LINC00601-201ENST00000456514 GOLGA2Q08379 1002 aa13.83□□□□□ -0.2
LINC00601-201ENST00000456514 ZNF467Q7Z7K2 595 aaPredicted RBP13.83□□□□□ -0.2
LINC00601-201ENST00000456514 SNPHO15079 494 aa13.81□□□□□ -0.2
LINC00601-201ENST00000456514 MKRN3Q13064 507 aaKnown RBP13.78□□□□□ -0.2
LINC00601-201ENST00000456514 TMEM121BQ9BXQ6 578 aaPredicted RBP13.76□□□□□ -0.21
LINC00601-201ENST00000456514 C3orf67Q6ZVT6 689 aa13.74□□□□□ -0.21
LINC00601-201ENST00000456514 CHRM1P11229 460 aaPredicted RBP13.72□□□□□ -0.21
LINC00601-201ENST00000456514 PDCD7Q8N8D1 485 aaKnown RBP13.72□□□□□ -0.21
LINC00601-201ENST00000456514 L3MBTL3Q96JM7 780 aaPredicted RBP13.72□□□□□ -0.21
LINC00601-201ENST00000456514 PSEN1P49768 467 aa13.71□□□□□ -0.21
LINC00601-201ENST00000456514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC00601-201ENST00000456514 MARVELD3Q96A59 401 aa13.68□□□□□ -0.22
LINC00601-201ENST00000456514 PDAP1Q13442 181 aaKnown RBP13.63□□□□□ -0.23
LINC00601-201ENST00000456514 CIZ1Q9ULV3 898 aaPredicted RBP13.62□□□□□ -0.23
LINC00601-201ENST00000456514 SPOCK2Q92563 424 aa13.6□□□□□ -0.23
LINC00601-201ENST00000456514 EMP3P54852 163 aa13.58□□□□□ -0.24
LINC00601-201ENST00000456514 G3V3G9 751 aa13.56□□□□□ -0.24
LINC00601-201ENST00000456514 SPNS2Q8IVW8 549 aa13.56□□□□□ -0.24
LINC00601-201ENST00000456514 CABP2Q9NPB3 220 aa13.56□□□□□ -0.24
LINC00601-201ENST00000456514 MMRN1Q13201 1228 aa13.55□□□□□ -0.24
LINC00601-201ENST00000456514 IFNLR1Q8IU57 520 aaPredicted RBP13.54□□□□□ -0.24
LINC00601-201ENST00000456514 DPY19L2Q6NUT2 758 aa13.52□□□□□ -0.25
LINC00601-201ENST00000456514 ILDR1Q86SU0 546 aaPredicted RBP13.51□□□□□ -0.25
LINC00601-201ENST00000456514 BOLA1Q9Y3E2 137 aa13.48□□□□□ -0.25
LINC00601-201ENST00000456514 FAM205CA6NFA0 338 aa13.47□□□□□ -0.25
LINC00601-201ENST00000456514 HS3ST6Q96QI5 342 aa13.45□□□□□ -0.26
LINC00601-201ENST00000456514 POTEB3A0JP26 581 aa13.39□□□□□ -0.27
LINC00601-201ENST00000456514 POTEBQ6S5H4 581 aa13.39□□□□□ -0.27
LINC00601-201ENST00000456514 ZNF710Q8N1W2 664 aa13.39□□□□□ -0.27
LINC00601-201ENST00000456514 TRIM41Q8WV44 630 aa13.38□□□□□ -0.27
LINC00601-201ENST00000456514 KRTAP3-3Q9BYR6 98 aa13.36□□□□□ -0.27
LINC00601-201ENST00000456514 KRTAP3-2Q9BYR7 98 aa13.36□□□□□ -0.27
LINC00601-201ENST00000456514 HOXB3P14651 431 aaPredicted RBP13.35□□□□□ -0.27
LINC00601-201ENST00000456514 EFCAB3Q8N7B9 438 aa13.35□□□□□ -0.27
LINC00601-201ENST00000456514 DOK7Q18PE1 504 aa13.34□□□□□ -0.27
LINC00601-201ENST00000456514 HOXB1P14653 301 aaPredicted RBP13.3□□□□□ -0.28
LINC00601-201ENST00000456514 RIMBP2O15034 1052 aa13.28□□□□□ -0.28
LINC00601-201ENST00000456514 ERBB3P21860 1342 aa13.28□□□□□ -0.28
LINC00601-201ENST00000456514 MICALL2Q8IY33 904 aa13.22□□□□□ -0.29
LINC00601-201ENST00000456514 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.29
LINC00601-201ENST00000456514 SOX12O15370 315 aa13.2□□□□□ -0.3
LINC00601-201ENST00000456514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.17□□□□□ -0.3
LINC00601-201ENST00000456514 VARS2Q5ST30 1063 aaKnown RBP13.17□□□□□ -0.3
LINC00601-201ENST00000456514 ZFP91Q96JP5 570 aaPredicted RBP13.17□□□□□ -0.3
LINC00601-201ENST00000456514 VGFO15240 615 aaPredicted RBP13.16□□□□□ -0.3
LINC00601-201ENST00000456514 TMEM92Q6UXU6 159 aa13.15□□□□□ -0.3
LINC00601-201ENST00000456514 ZSWIM6Q9HCJ5 1215 aa13.14□□□□□ -0.31
LINC00601-201ENST00000456514 RNF25Q96BH1 459 aaPredicted RBP13.13□□□□□ -0.31
LINC00601-201ENST00000456514 PHF8Q9UPP1 1060 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms