RNA–Protein interactions for RNA: ENST00000454716.1

RPS3AP53-201, Transcript of ribosomal protein S3a pseudogene 53, humanhuman

BASIC

Gene RPS3AP53, Length 778 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP53-201ENST00000454716 PHF12Q96QT6 1004 aa16.16■□□□□ 0.18
RPS3AP53-201ENST00000454716 CCDC61Q9Y6R9 512 aa16.14■□□□□ 0.17
RPS3AP53-201ENST00000454716 DCBLD2Q96PD2 775 aa16.11■□□□□ 0.17
RPS3AP53-201ENST00000454716 GALR2O43603 387 aaPredicted RBP16.05■□□□□ 0.16
RPS3AP53-201ENST00000454716 DCAF8Q5TAQ9 597 aa16.03■□□□□ 0.16
RPS3AP53-201ENST00000454716 KIF12Q96FN5 646 aa16.02■□□□□ 0.16
RPS3AP53-201ENST00000454716 GSE1Q14687 1217 aa16.01■□□□□ 0.15
RPS3AP53-201ENST00000454716 SPOCK2Q92563 424 aa16.01■□□□□ 0.15
RPS3AP53-201ENST00000454716 IFNLR1Q8IU57 520 aaPredicted RBP16■□□□□ 0.15
RPS3AP53-201ENST00000454716 MS4A3Q96HJ5 214 aa15.98■□□□□ 0.15
RPS3AP53-201ENST00000454716 SGIP1Q9BQI5 828 aa15.98■□□□□ 0.15
RPS3AP53-201ENST00000454716 MAP3K13O43283 966 aa15.93■□□□□ 0.14
RPS3AP53-201ENST00000454716 POTEIP0CG38 1075 aa15.91■□□□□ 0.14
RPS3AP53-201ENST00000454716 PCDHB13Q9Y5F0 798 aa15.9■□□□□ 0.14
RPS3AP53-201ENST00000454716 TIE1P35590 1138 aa15.82■□□□□ 0.12
RPS3AP53-201ENST00000454716 ASTLQ6HA08 431 aaPredicted RBP15.82■□□□□ 0.12
RPS3AP53-201ENST00000454716 PYGBP11216 843 aa15.81■□□□□ 0.12
RPS3AP53-201ENST00000454716 CIZ1Q9ULV3 898 aaPredicted RBP15.8■□□□□ 0.12
RPS3AP53-201ENST00000454716 ATMINO43313 823 aaPredicted RBP15.78■□□□□ 0.12
RPS3AP53-201ENST00000454716 CHRM1P11229 460 aaPredicted RBP15.78■□□□□ 0.12
RPS3AP53-201ENST00000454716 TRIM41Q8WV44 630 aa15.76■□□□□ 0.11
RPS3AP53-201ENST00000454716 IFNL1Q8IU54 200 aa15.75■□□□□ 0.11
RPS3AP53-201ENST00000454716 ZNF467Q7Z7K2 595 aaPredicted RBP15.74■□□□□ 0.11
RPS3AP53-201ENST00000454716 SLC39A7Q92504 469 aa15.73■□□□□ 0.11
RPS3AP53-201ENST00000454716 BMP2KQ9NSY1 1161 aaPredicted RBP15.72■□□□□ 0.11
RPS3AP53-201ENST00000454716 LHX8Q68G74 356 aa15.71■□□□□ 0.11
RPS3AP53-201ENST00000454716 C7P10643 843 aa15.7■□□□□ 0.1
RPS3AP53-201ENST00000454716 ATN1P54259 1190 aaPredicted RBP15.68■□□□□ 0.1
RPS3AP53-201ENST00000454716 TTLL13PA6NNM8 815 aa15.67■□□□□ 0.1
RPS3AP53-201ENST00000454716 TRPC6Q9Y210 931 aa15.67■□□□□ 0.1
RPS3AP53-201ENST00000454716 PELP1Q8IZL8 1130 aaKnown RBP15.65■□□□□ 0.1
RPS3AP53-201ENST00000454716 TMEM106CQ9BVX2 250 aa15.63■□□□□ 0.09
RPS3AP53-201ENST00000454716 METRNQ9UJH8 293 aa15.63■□□□□ 0.09
RPS3AP53-201ENST00000454716 PCDHB8Q9UN66 801 aa15.63■□□□□ 0.09
RPS3AP53-201ENST00000454716 IER5LQ5T953 404 aa15.58■□□□□ 0.08
RPS3AP53-201ENST00000454716 TRIM35Q9UPQ4 493 aa15.58■□□□□ 0.08
RPS3AP53-201ENST00000454716 SEC24BO95487 1268 aa15.52■□□□□ 0.08
RPS3AP53-201ENST00000454716 PDAP1Q13442 181 aaKnown RBP15.52■□□□□ 0.08
RPS3AP53-201ENST00000454716 PSEN1P49768 467 aa15.5■□□□□ 0.07
RPS3AP53-201ENST00000454716 GOLGA2Q08379 1002 aa15.5■□□□□ 0.07
RPS3AP53-201ENST00000454716 MAMSTRQ6ZN01 415 aa15.45■□□□□ 0.06
RPS3AP53-201ENST00000454716 TAOK2Q9UL54 1235 aa15.44■□□□□ 0.06
RPS3AP53-201ENST00000454716 RIOK3O14730 519 aaKnown RBP15.41■□□□□ 0.06
RPS3AP53-201ENST00000454716 PLCG2P16885 1265 aa15.41■□□□□ 0.06
RPS3AP53-201ENST00000454716 MKRN3Q13064 507 aaKnown RBP15.4■□□□□ 0.06
RPS3AP53-201ENST00000454716 POTEB2H3BUK9 544 aa15.37■□□□□ 0.05
RPS3AP53-201ENST00000454716 VGFO15240 615 aaPredicted RBP15.36■□□□□ 0.05
RPS3AP53-201ENST00000454716 ECM2O94769 699 aaPredicted RBP15.36■□□□□ 0.05
RPS3AP53-201ENST00000454716 OCEL1Q9H607 264 aa15.36■□□□□ 0.05
RPS3AP53-201ENST00000454716 SCUBE2Q9NQ36 999 aa15.35■□□□□ 0.05
RPS3AP53-201ENST00000454716 COLQQ9Y215 455 aaPredicted RBP15.35■□□□□ 0.05
RPS3AP53-201ENST00000454716 POTEFA5A3E0 1075 aa15.34■□□□□ 0.05
RPS3AP53-201ENST00000454716 IRX5P78411 483 aaPredicted RBP15.33■□□□□ 0.04
RPS3AP53-201ENST00000454716 OTUD5Q96G74 571 aa15.29■□□□□ 0.04
RPS3AP53-201ENST00000454716 CABP2Q9NPB3 220 aa15.29■□□□□ 0.04
RPS3AP53-201ENST00000454716 RNF25Q96BH1 459 aaPredicted RBP15.28■□□□□ 0.04
RPS3AP53-201ENST00000454716 PKD2Q13563 968 aa15.27■□□□□ 0.04
RPS3AP53-201ENST00000454716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.25■□□□□ 0.03
RPS3AP53-201ENST00000454716 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.22■□□□□ 0.03
RPS3AP53-201ENST00000454716 POTEJP0CG39 1038 aa15.22■□□□□ 0.03
RPS3AP53-201ENST00000454716 ZFP91Q96JP5 570 aaPredicted RBP15.22■□□□□ 0.03
RPS3AP53-201ENST00000454716 L3MBTL3Q96JM7 780 aaPredicted RBP15.19■□□□□ 0.02
RPS3AP53-201ENST00000454716 PDCD7Q8N8D1 485 aaKnown RBP15.16■□□□□ 0.02
RPS3AP53-201ENST00000454716 SOX12O15370 315 aa15.14■□□□□ 0.01
RPS3AP53-201ENST00000454716 ILDR1Q86SU0 546 aaPredicted RBP15.14■□□□□ 0.01
RPS3AP53-201ENST00000454716 EFCAB3Q8N7B9 438 aa15.14■□□□□ 0.01
RPS3AP53-201ENST00000454716 G3V3G9 751 aa15.13■□□□□ 0.01
RPS3AP53-201ENST00000454716 RGL2O15211 777 aa15.12■□□□□ 0.01
RPS3AP53-201ENST00000454716 BCL11BQ9C0K0 894 aaPredicted RBP15.11■□□□□ 0.01
RPS3AP53-201ENST00000454716 STK25O00506 426 aa15.1■□□□□ 0.01
RPS3AP53-201ENST00000454716 STK24Q9Y6E0 443 aa15.1■□□□□ 0.01
RPS3AP53-201ENST00000454716 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.09■□□□□ 0.01
RPS3AP53-201ENST00000454716 C3orf67Q6ZVT6 689 aa15.07■□□□□ 0
RPS3AP53-201ENST00000454716 SLAIN1Q8ND83 568 aa15.04■□□□□ -0
RPS3AP53-201ENST00000454716 NLRP6P59044 892 aa15.01□□□□□ -0.01
RPS3AP53-201ENST00000454716 BOLA1Q9Y3E2 137 aa15□□□□□ -0.01
RPS3AP53-201ENST00000454716 DPY19L2Q6NUT2 758 aa14.97□□□□□ -0.01
RPS3AP53-201ENST00000454716 PHF8Q9UPP1 1060 aa14.95□□□□□ -0.02
RPS3AP53-201ENST00000454716 SNPHO15079 494 aa14.93□□□□□ -0.02
RPS3AP53-201ENST00000454716 HS6ST3Q8IZP7 471 aa14.91□□□□□ -0.02
RPS3AP53-201ENST00000454716 TMEM121BQ9BXQ6 578 aaPredicted RBP14.89□□□□□ -0.03
RPS3AP53-201ENST00000454716 FAM163AQ96GL9 167 aaPredicted RBP14.87□□□□□ -0.03
RPS3AP53-201ENST00000454716 CHGAP10645 457 aaKnown RBP14.86□□□□□ -0.03
RPS3AP53-201ENST00000454716 FBXO22Q8NEZ5 403 aa14.86□□□□□ -0.03
RPS3AP53-201ENST00000454716 MS4A4AQ96JQ5 239 aa14.86□□□□□ -0.03
RPS3AP53-201ENST00000454716 MFRPQ9BY79 579 aa14.86□□□□□ -0.03
RPS3AP53-201ENST00000454716 MICALL2Q8IY33 904 aa14.84□□□□□ -0.03
RPS3AP53-201ENST00000454716 RYDENQ9NUL5 291 aaKnown RBP14.8□□□□□ -0.04
RPS3AP53-201ENST00000454716 AMER1Q5JTC6 1135 aaPredicted RBP14.79□□□□□ -0.04
RPS3AP53-201ENST00000454716 DCAF8L2P0C7V8 631 aa14.78□□□□□ -0.04
RPS3AP53-201ENST00000454716 DNAJC5Q9H3Z4 198 aa14.77□□□□□ -0.05
RPS3AP53-201ENST00000454716 POTEMA6NI47 508 aa14.74□□□□□ -0.05
RPS3AP53-201ENST00000454716 POTEGQ6S5H5 508 aa14.73□□□□□ -0.05
RPS3AP53-201ENST00000454716 ST18O60284 1047 aa14.69□□□□□ -0.06
RPS3AP53-201ENST00000454716 DOK7Q18PE1 504 aa14.67□□□□□ -0.06
RPS3AP53-201ENST00000454716 LCE2DQ5TA82 110 aaPredicted RBP14.67□□□□□ -0.06
RPS3AP53-201ENST00000454716 PCDH10Q9P2E7 1040 aa14.66□□□□□ -0.06
RPS3AP53-201ENST00000454716 RIMBP2O15034 1052 aa14.64□□□□□ -0.07
RPS3AP53-201ENST00000454716 ZNF710Q8N1W2 664 aa14.62□□□□□ -0.07
RPS3AP53-201ENST00000454716 TMEM92Q6UXU6 159 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms