RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 FAM163AQ96GL9 167 aaPredicted RBP11.64□□□□□ -0.55
LINC00393-202ENST00000452852 VASPP50552 380 aaPredicted RBP11.63□□□□□ -0.55
LINC00393-202ENST00000452852 PLCD3Q8N3E9 789 aa11.63□□□□□ -0.55
LINC00393-202ENST00000452852 METRNQ9UJH8 293 aa11.62□□□□□ -0.55
LINC00393-202ENST00000452852 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
LINC00393-202ENST00000452852 C7P10643 843 aa11.6□□□□□ -0.55
LINC00393-202ENST00000452852 SLC39A7Q92504 469 aa11.6□□□□□ -0.55
LINC00393-202ENST00000452852 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
LINC00393-202ENST00000452852 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
LINC00393-202ENST00000452852 SCUBE2Q9NQ36 999 aa11.58□□□□□ -0.56
LINC00393-202ENST00000452852 MNX1P50219 401 aaPredicted RBP11.57□□□□□ -0.56
LINC00393-202ENST00000452852 NPM1P06748 294 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC00393-202ENST00000452852 ASTLQ6HA08 431 aaPredicted RBP11.52□□□□□ -0.57
LINC00393-202ENST00000452852 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
LINC00393-202ENST00000452852 POTEJP0CG39 1038 aa11.48□□□□□ -0.57
LINC00393-202ENST00000452852 IFNLR1Q8IU57 520 aaPredicted RBP11.48□□□□□ -0.57
LINC00393-202ENST00000452852 ZBTB47Q9UFB7 747 aaPredicted RBP11.48□□□□□ -0.57
LINC00393-202ENST00000452852 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
LINC00393-202ENST00000452852 KLHL34Q8N239 644 aa11.46□□□□□ -0.57
LINC00393-202ENST00000452852 MS4A3Q96HJ5 214 aa11.43□□□□□ -0.58
LINC00393-202ENST00000452852 CDAN1Q8IWY9 1227 aa11.42□□□□□ -0.58
LINC00393-202ENST00000452852 NUBP1P53384 320 aa11.38□□□□□ -0.59
LINC00393-202ENST00000452852 RASEFQ8IZ41 740 aa11.36□□□□□ -0.59
LINC00393-202ENST00000452852 SPOCK2Q92563 424 aa11.35□□□□□ -0.59
LINC00393-202ENST00000452852 TSPYL2Q9H2G4 693 aaPredicted RBP11.33□□□□□ -0.6
LINC00393-202ENST00000452852 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
LINC00393-202ENST00000452852 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
LINC00393-202ENST00000452852 DCAF8Q5TAQ9 597 aa11.26□□□□□ -0.61
LINC00393-202ENST00000452852 SEC24BO95487 1268 aa11.25□□□□□ -0.61
LINC00393-202ENST00000452852 CCDC61Q9Y6R9 512 aa11.24□□□□□ -0.61
LINC00393-202ENST00000452852 GSE1Q14687 1217 aa11.2□□□□□ -0.62
LINC00393-202ENST00000452852 CIZ1Q9ULV3 898 aaPredicted RBP11.2□□□□□ -0.62
LINC00393-202ENST00000452852 MMRN1Q13201 1228 aa11.19□□□□□ -0.62
LINC00393-202ENST00000452852 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
LINC00393-202ENST00000452852 BMP2KQ9NSY1 1161 aaPredicted RBP11.18□□□□□ -0.62
LINC00393-202ENST00000452852 ST18O60284 1047 aa11.14□□□□□ -0.63
LINC00393-202ENST00000452852 TIE1P35590 1138 aa11.14□□□□□ -0.63
LINC00393-202ENST00000452852 KIF12Q96FN5 646 aa11.14□□□□□ -0.63
LINC00393-202ENST00000452852 PYGBP11216 843 aa11.13□□□□□ -0.63
LINC00393-202ENST00000452852 SPNS2Q8IVW8 549 aa11.13□□□□□ -0.63
LINC00393-202ENST00000452852 SLAIN1Q8ND83 568 aa11.12□□□□□ -0.63
LINC00393-202ENST00000452852 MAP3K13O43283 966 aa11.11□□□□□ -0.63
LINC00393-202ENST00000452852 COLQQ9Y215 455 aaPredicted RBP11.1□□□□□ -0.63
LINC00393-202ENST00000452852 CHRM1P11229 460 aaPredicted RBP11.07□□□□□ -0.64
LINC00393-202ENST00000452852 IER5LQ5T953 404 aa11.06□□□□□ -0.64
LINC00393-202ENST00000452852 PCDHB13Q9Y5F0 798 aa11.06□□□□□ -0.64
LINC00393-202ENST00000452852 PKD2Q13563 968 aa11.05□□□□□ -0.64
LINC00393-202ENST00000452852 TRIM41Q8WV44 630 aa11.04□□□□□ -0.64
LINC00393-202ENST00000452852 SGIP1Q9BQI5 828 aa11.04□□□□□ -0.64
LINC00393-202ENST00000452852 TMEM121BQ9BXQ6 578 aaPredicted RBP11.04□□□□□ -0.64
LINC00393-202ENST00000452852 TRPC6Q9Y210 931 aa11.04□□□□□ -0.64
LINC00393-202ENST00000452852 TTLL13PA6NNM8 815 aa11.03□□□□□ -0.64
LINC00393-202ENST00000452852 IFNL1Q8IU54 200 aa11.02□□□□□ -0.65
LINC00393-202ENST00000452852 SNPHO15079 494 aa10.99□□□□□ -0.65
LINC00393-202ENST00000452852 ECM2O94769 699 aaPredicted RBP10.99□□□□□ -0.65
LINC00393-202ENST00000452852 PCDHB8Q9UN66 801 aa10.99□□□□□ -0.65
LINC00393-202ENST00000452852 TRIM35Q9UPQ4 493 aa10.99□□□□□ -0.65
LINC00393-202ENST00000452852 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
LINC00393-202ENST00000452852 PLCG2P16885 1265 aa10.94□□□□□ -0.66
LINC00393-202ENST00000452852 RNF25Q96BH1 459 aaPredicted RBP10.94□□□□□ -0.66
LINC00393-202ENST00000452852 RGL2O15211 777 aa10.91□□□□□ -0.66
LINC00393-202ENST00000452852 AMER1Q5JTC6 1135 aaPredicted RBP10.91□□□□□ -0.66
LINC00393-202ENST00000452852 MARVELD3Q96A59 401 aa10.9□□□□□ -0.66
LINC00393-202ENST00000452852 RTN4Q9NQC3 1192 aaKnown RBP10.9□□□□□ -0.66
LINC00393-202ENST00000452852 RIOK3O14730 519 aaKnown RBP10.89□□□□□ -0.67
LINC00393-202ENST00000452852 PSEN1P49768 467 aa10.87□□□□□ -0.67
LINC00393-202ENST00000452852 PDAP1Q13442 181 aaKnown RBP10.86□□□□□ -0.67
LINC00393-202ENST00000452852 TMEM106CQ9BVX2 250 aa10.86□□□□□ -0.67
LINC00393-202ENST00000452852 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.84□□□□□ -0.67
LINC00393-202ENST00000452852 VGFO15240 615 aaPredicted RBP10.83□□□□□ -0.68
LINC00393-202ENST00000452852 EMP3P54852 163 aa10.81□□□□□ -0.68
LINC00393-202ENST00000452852 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.8□□□□□ -0.68
LINC00393-202ENST00000452852 ZFP91Q96JP5 570 aaPredicted RBP10.8□□□□□ -0.68
LINC00393-202ENST00000452852 TAOK2Q9UL54 1235 aa10.79□□□□□ -0.68
LINC00393-202ENST00000452852 OCEL1Q9H607 264 aa10.76□□□□□ -0.69
LINC00393-202ENST00000452852 IRX5P78411 483 aaPredicted RBP10.75□□□□□ -0.69
LINC00393-202ENST00000452852 CABP2Q9NPB3 220 aa10.74□□□□□ -0.69
LINC00393-202ENST00000452852 STK25O00506 426 aa10.72□□□□□ -0.69
LINC00393-202ENST00000452852 DCAF8L2P0C7V8 631 aa10.72□□□□□ -0.69
LINC00393-202ENST00000452852 BCL11BQ9C0K0 894 aaPredicted RBP10.72□□□□□ -0.69
LINC00393-202ENST00000452852 GOLGA2Q08379 1002 aa10.71□□□□□ -0.69
LINC00393-202ENST00000452852 STK24Q9Y6E0 443 aa10.71□□□□□ -0.69
LINC00393-202ENST00000452852 HS3ST6Q96QI5 342 aa10.7□□□□□ -0.7
LINC00393-202ENST00000452852 FAM205CA6NFA0 338 aa10.69□□□□□ -0.7
LINC00393-202ENST00000452852 KRTAP3-3Q9BYR6 98 aa10.69□□□□□ -0.7
LINC00393-202ENST00000452852 KRTAP3-2Q9BYR7 98 aa10.69□□□□□ -0.7
LINC00393-202ENST00000452852 CHGAP10645 457 aaKnown RBP10.68□□□□□ -0.7
LINC00393-202ENST00000452852 MKRN3Q13064 507 aaKnown RBP10.68□□□□□ -0.7
LINC00393-202ENST00000452852 C3orf67Q6ZVT6 689 aa10.67□□□□□ -0.7
LINC00393-202ENST00000452852 EFCAB3Q8N7B9 438 aa10.67□□□□□ -0.7
LINC00393-202ENST00000452852 HS6ST3Q8IZP7 471 aa10.65□□□□□ -0.7
LINC00393-202ENST00000452852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.61□□□□□ -0.71
LINC00393-202ENST00000452852 RNF166Q96A37 237 aaPredicted RBP10.59□□□□□ -0.71
LINC00393-202ENST00000452852 POTEB3A0JP26 581 aa10.58□□□□□ -0.72
LINC00393-202ENST00000452852 SOX12O15370 315 aa10.58□□□□□ -0.72
LINC00393-202ENST00000452852 POTEBQ6S5H4 581 aa10.58□□□□□ -0.72
LINC00393-202ENST00000452852 ILDR1Q86SU0 546 aaPredicted RBP10.58□□□□□ -0.72
LINC00393-202ENST00000452852 PDCD7Q8N8D1 485 aaKnown RBP10.57□□□□□ -0.72
LINC00393-202ENST00000452852 L3MBTL3Q96JM7 780 aaPredicted RBP10.57□□□□□ -0.72
LINC00393-202ENST00000452852 PHF8Q9UPP1 1060 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms