RNA–Protein interactions for RNA: ENST00000452104.5

PRKD3-205, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-205ENST00000452104 CCDC61Q9Y6R9 512 aa11.18□□□□□ -0.62
PRKD3-205ENST00000452104 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
PRKD3-205ENST00000452104 ATMINO43313 823 aaPredicted RBP11.17□□□□□ -0.62
PRKD3-205ENST00000452104 MIER1Q8N108 512 aa11.17□□□□□ -0.62
PRKD3-205ENST00000452104 C7P10643 843 aa11.16□□□□□ -0.62
PRKD3-205ENST00000452104 METRNQ9UJH8 293 aa11.16□□□□□ -0.62
PRKD3-205ENST00000452104 KIF12Q96FN5 646 aa11.12□□□□□ -0.63
PRKD3-205ENST00000452104 FKBP8Q14318 412 aa11.1□□□□□ -0.63
PRKD3-205ENST00000452104 PLCD3Q8N3E9 789 aa11.09□□□□□ -0.63
PRKD3-205ENST00000452104 MAMSTRQ6ZN01 415 aa11.08□□□□□ -0.64
PRKD3-205ENST00000452104 RASEFQ8IZ41 740 aa11.07□□□□□ -0.64
PRKD3-205ENST00000452104 ZBTB47Q9UFB7 747 aaPredicted RBP11.07□□□□□ -0.64
PRKD3-205ENST00000452104 ATN1P54259 1190 aaPredicted RBP11.06□□□□□ -0.64
PRKD3-205ENST00000452104 MAP3K13O43283 966 aa11.04□□□□□ -0.64
PRKD3-205ENST00000452104 TIE1P35590 1138 aa11.03□□□□□ -0.64
PRKD3-205ENST00000452104 BMP2KQ9NSY1 1161 aaPredicted RBP11.03□□□□□ -0.64
PRKD3-205ENST00000452104 PLSCR2Q9NRY7 297 aa11.02□□□□□ -0.65
PRKD3-205ENST00000452104 SCUBE2Q9NQ36 999 aa11□□□□□ -0.65
PRKD3-205ENST00000452104 SGIP1Q9BQI5 828 aa10.99□□□□□ -0.65
PRKD3-205ENST00000452104 POTEMA6NI47 508 aa10.98□□□□□ -0.65
PRKD3-205ENST00000452104 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
PRKD3-205ENST00000452104 TRPC6Q9Y210 931 aa10.98□□□□□ -0.65
PRKD3-205ENST00000452104 POTEGQ6S5H5 508 aa10.95□□□□□ -0.66
PRKD3-205ENST00000452104 TTLL13PA6NNM8 815 aa10.94□□□□□ -0.66
PRKD3-205ENST00000452104 NUBP1P53384 320 aa10.94□□□□□ -0.66
PRKD3-205ENST00000452104 PCDHB13Q9Y5F0 798 aa10.94□□□□□ -0.66
PRKD3-205ENST00000452104 FAM212AQ96EL1 285 aa10.93□□□□□ -0.66
PRKD3-205ENST00000452104 SEC24BO95487 1268 aa10.92□□□□□ -0.66
PRKD3-205ENST00000452104 POTEFA5A3E0 1075 aa10.9□□□□□ -0.66
PRKD3-205ENST00000452104 IER5LQ5T953 404 aa10.9□□□□□ -0.66
PRKD3-205ENST00000452104 PCDH10Q9P2E7 1040 aa10.88□□□□□ -0.67
PRKD3-205ENST00000452104 TRIM35Q9UPQ4 493 aa10.88□□□□□ -0.67
PRKD3-205ENST00000452104 IFNL1Q8IU54 200 aa10.85□□□□□ -0.67
PRKD3-205ENST00000452104 COLQQ9Y215 455 aaPredicted RBP10.85□□□□□ -0.67
PRKD3-205ENST00000452104 FAM163AQ96GL9 167 aaPredicted RBP10.83□□□□□ -0.68
PRKD3-205ENST00000452104 FBXO3Q9UK99 471 aa10.83□□□□□ -0.68
PRKD3-205ENST00000452104 TMEM106CQ9BVX2 250 aa10.81□□□□□ -0.68
PRKD3-205ENST00000452104 LCE2DQ5TA82 110 aaPredicted RBP10.78□□□□□ -0.68
PRKD3-205ENST00000452104 DCAF8Q5TAQ9 597 aa10.78□□□□□ -0.68
PRKD3-205ENST00000452104 PLCG2P16885 1265 aa10.76□□□□□ -0.69
PRKD3-205ENST00000452104 PYGBP11216 843 aa10.72□□□□□ -0.69
PRKD3-205ENST00000452104 SLAIN1Q8ND83 568 aa10.7□□□□□ -0.7
PRKD3-205ENST00000452104 IRX5P78411 483 aaPredicted RBP10.69□□□□□ -0.7
PRKD3-205ENST00000452104 KLHL34Q8N239 644 aa10.68□□□□□ -0.7
PRKD3-205ENST00000452104 GSE1Q14687 1217 aa10.67□□□□□ -0.7
PRKD3-205ENST00000452104 OCEL1Q9H607 264 aa10.67□□□□□ -0.7
PRKD3-205ENST00000452104 VASPP50552 380 aaPredicted RBP10.66□□□□□ -0.7
PRKD3-205ENST00000452104 PCDHB8Q9UN66 801 aa10.65□□□□□ -0.7
PRKD3-205ENST00000452104 ZNF467Q7Z7K2 595 aaPredicted RBP10.63□□□□□ -0.71
PRKD3-205ENST00000452104 ST18O60284 1047 aa10.59□□□□□ -0.71
PRKD3-205ENST00000452104 GOLGA2Q08379 1002 aa10.59□□□□□ -0.71
PRKD3-205ENST00000452104 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.59□□□□□ -0.71
PRKD3-205ENST00000452104 CDAN1Q8IWY9 1227 aa10.58□□□□□ -0.72
PRKD3-205ENST00000452104 SNPHO15079 494 aa10.57□□□□□ -0.72
PRKD3-205ENST00000452104 CHRM1P11229 460 aaPredicted RBP10.57□□□□□ -0.72
PRKD3-205ENST00000452104 MKRN3Q13064 507 aaKnown RBP10.56□□□□□ -0.72
PRKD3-205ENST00000452104 TMEM121BQ9BXQ6 578 aaPredicted RBP10.54□□□□□ -0.72
PRKD3-205ENST00000452104 AMER1Q5JTC6 1135 aaPredicted RBP10.53□□□□□ -0.72
PRKD3-205ENST00000452104 PSEN1P49768 467 aa10.51□□□□□ -0.73
PRKD3-205ENST00000452104 C3orf67Q6ZVT6 689 aa10.51□□□□□ -0.73
PRKD3-205ENST00000452104 PDCD7Q8N8D1 485 aaKnown RBP10.51□□□□□ -0.73
PRKD3-205ENST00000452104 L3MBTL3Q96JM7 780 aaPredicted RBP10.51□□□□□ -0.73
PRKD3-205ENST00000452104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.48□□□□□ -0.739e-7■□□□□ 10.8
PRKD3-205ENST00000452104 SPOCK2Q92563 424 aa10.47□□□□□ -0.73
PRKD3-205ENST00000452104 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
PRKD3-205ENST00000452104 PDAP1Q13442 181 aaKnown RBP10.46□□□□□ -0.73
PRKD3-205ENST00000452104 CIZ1Q9ULV3 898 aaPredicted RBP10.43□□□□□ -0.74
PRKD3-205ENST00000452104 IFNLR1Q8IU57 520 aaPredicted RBP10.41□□□□□ -0.74
PRKD3-205ENST00000452104 ILDR1Q86SU0 546 aaPredicted RBP10.39□□□□□ -0.75
PRKD3-205ENST00000452104 MARVELD3Q96A59 401 aa10.39□□□□□ -0.75
PRKD3-205ENST00000452104 G3V3G9 751 aa10.38□□□□□ -0.75
PRKD3-205ENST00000452104 CABP2Q9NPB3 220 aa10.38□□□□□ -0.75
PRKD3-205ENST00000452104 EMP3P54852 163 aa10.35□□□□□ -0.75
PRKD3-205ENST00000452104 TRIM41Q8WV44 630 aa10.35□□□□□ -0.75
PRKD3-205ENST00000452104 SPNS2Q8IVW8 549 aa10.32□□□□□ -0.76
PRKD3-205ENST00000452104 BOLA1Q9Y3E2 137 aa10.32□□□□□ -0.76
PRKD3-205ENST00000452104 DPY19L2Q6NUT2 758 aa10.31□□□□□ -0.76
PRKD3-205ENST00000452104 MMRN1Q13201 1228 aa10.3□□□□□ -0.76
PRKD3-205ENST00000452104 HS3ST6Q96QI5 342 aa10.26□□□□□ -0.77
PRKD3-205ENST00000452104 FAM205CA6NFA0 338 aa10.25□□□□□ -0.77
PRKD3-205ENST00000452104 ZNF710Q8N1W2 664 aa10.22□□□□□ -0.77
PRKD3-205ENST00000452104 EFCAB3Q8N7B9 438 aa10.22□□□□□ -0.77
PRKD3-205ENST00000452104 HOXB3P14651 431 aaPredicted RBP10.21□□□□□ -0.77
PRKD3-205ENST00000452104 DOK7Q18PE1 504 aa10.21□□□□□ -0.77
PRKD3-205ENST00000452104 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
PRKD3-205ENST00000452104 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
PRKD3-205ENST00000452104 POTEB3A0JP26 581 aa10.18□□□□□ -0.78
PRKD3-205ENST00000452104 RIMBP2O15034 1052 aa10.18□□□□□ -0.78
PRKD3-205ENST00000452104 HOXB1P14653 301 aaPredicted RBP10.18□□□□□ -0.78
PRKD3-205ENST00000452104 POTEBQ6S5H4 581 aa10.18□□□□□ -0.78
PRKD3-205ENST00000452104 RIOK3O14730 519 aaKnown RBP10.16□□□□□ -0.78
PRKD3-205ENST00000452104 SOX12O15370 315 aa10.16□□□□□ -0.78
PRKD3-205ENST00000452104 NISCHQ9Y2I1 1504 aa10.13□□□□□ -0.79
PRKD3-205ENST00000452104 VGFO15240 615 aaPredicted RBP10.13□□□□□ -0.79
PRKD3-205ENST00000452104 MICALL2Q8IY33 904 aa10.13□□□□□ -0.79
PRKD3-205ENST00000452104 ERBB3P21860 1342 aa10.12□□□□□ -0.79
PRKD3-205ENST00000452104 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.1□□□□□ -0.79
PRKD3-205ENST00000452104 ZFP91Q96JP5 570 aaPredicted RBP10.1□□□□□ -0.79
PRKD3-205ENST00000452104 ZSWIM6Q9HCJ5 1215 aa10.1□□□□□ -0.79
PRKD3-205ENST00000452104 RNF25Q96BH1 459 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms