RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 PLEKHD1A6NEE1 506 aa17.06■□□□□ 0.32
AC006001.3-201ENST00000449307 RGL3Q3MIN7 710 aa17.04■□□□□ 0.32
AC006001.3-201ENST00000449307 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.01■□□□□ 0.31
AC006001.3-201ENST00000449307 RRP7BPQ9NSQ0 103 aa17■□□□□ 0.31
AC006001.3-201ENST00000449307 HNRNPUQ00839 825 aaKnown RBP eCLIP16.99■□□□□ 0.31
AC006001.3-201ENST00000449307 TAOK2Q9UL54 1235 aa16.97■□□□□ 0.31
AC006001.3-201ENST00000449307 DDX10Q13206 875 aaKnown RBP16.96■□□□□ 0.31
AC006001.3-201ENST00000449307 POGKQ9P215 609 aa16.96■□□□□ 0.31
AC006001.3-201ENST00000449307 GTF3C3Q9Y5Q9 886 aa16.94■□□□□ 0.3
AC006001.3-201ENST00000449307 LAS1LQ9Y4W2 734 aaKnown RBP16.93■□□□□ 0.3
AC006001.3-201ENST00000449307 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
AC006001.3-201ENST00000449307 AEBP2Q6ZN18 517 aaPredicted RBP16.9■□□□□ 0.3
AC006001.3-201ENST00000449307 SOX12O15370 315 aa16.9■□□□□ 0.3
AC006001.3-201ENST00000449307 GOLGA2Q08379 1002 aa16.88■□□□□ 0.29
AC006001.3-201ENST00000449307 CCDC9Q9Y3X0 531 aaKnown RBP16.87■□□□□ 0.29
AC006001.3-201ENST00000449307 HIRIP3Q9BW71 556 aaPredicted RBP16.86■□□□□ 0.29
AC006001.3-201ENST00000449307 CFAP53Q96M91 514 aa16.85■□□□□ 0.29
AC006001.3-201ENST00000449307 FKBP8Q14318 412 aa16.84■□□□□ 0.29
AC006001.3-201ENST00000449307 TPRNQ4KMQ1 711 aa16.84■□□□□ 0.29
AC006001.3-201ENST00000449307 CFDP1Q9UEE9 299 aaPredicted RBP16.84■□□□□ 0.29
AC006001.3-201ENST00000449307 MRS2Q9HD23 443 aa16.82■□□□□ 0.28
AC006001.3-201ENST00000449307 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
AC006001.3-201ENST00000449307 RB1CC1Q8TDY2 1594 aa16.81■□□□□ 0.28
AC006001.3-201ENST00000449307 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
AC006001.3-201ENST00000449307 ISY1Q9ULR0 285 aaKnown RBP16.8■□□□□ 0.28
AC006001.3-201ENST00000449307 CCDC136Q96JN2 1154 aa16.79■□□□□ 0.28
AC006001.3-201ENST00000449307 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
AC006001.3-201ENST00000449307 CLSTN1O94985 981 aa16.77■□□□□ 0.27
AC006001.3-201ENST00000449307 HDGFP51858 240 aaKnown RBP16.76■□□□□ 0.27
AC006001.3-201ENST00000449307 OS9Q13438 667 aaPredicted RBP16.76■□□□□ 0.27
AC006001.3-201ENST00000449307 KNSTRNQ9Y448 316 aa16.75■□□□□ 0.27
AC006001.3-201ENST00000449307 MAPK8IP3Q9UPT6 1336 aa16.75■□□□□ 0.27
AC006001.3-201ENST00000449307 PAK3O75914 559 aaPredicted RBP16.75■□□□□ 0.27
AC006001.3-201ENST00000449307 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
AC006001.3-201ENST00000449307 SAFB2Q14151 953 aaKnown RBP eCLIP16.73■□□□□ 0.27
AC006001.3-201ENST00000449307 CSB-PGBD3P0DP91 1061 aa16.71■□□□□ 0.27
AC006001.3-201ENST00000449307 NCLP19338 710 aaKnown RBP16.71■□□□□ 0.27
AC006001.3-201ENST00000449307 NAP1L2Q9ULW6 460 aaPredicted RBP16.71■□□□□ 0.27
AC006001.3-201ENST00000449307 ZNF330Q9Y3S2 320 aaPredicted RBP16.71■□□□□ 0.27
AC006001.3-201ENST00000449307 ZRSR1Q15695 479 aaKnown RBP16.71■□□□□ 0.26
AC006001.3-201ENST00000449307 EIF4G1Q04637 1599 aaKnown RBP16.71■□□□□ 0.26
AC006001.3-201ENST00000449307 FTSJ3Q8IY81 847 aaKnown RBP16.7■□□□□ 0.26
AC006001.3-201ENST00000449307 EIF4G2P78344 907 aaKnown RBP eCLIP16.7■□□□□ 0.26
AC006001.3-201ENST00000449307 U2SURPO15042 1029 aaKnown RBP16.69■□□□□ 0.26
AC006001.3-201ENST00000449307 CDCA8Q53HL2 280 aa16.69■□□□□ 0.26
AC006001.3-201ENST00000449307 TMX4Q9H1E5 349 aaPredicted RBP16.69■□□□□ 0.26
AC006001.3-201ENST00000449307 ZCCHC6Q5VYS8 1495 aaKnown RBP16.69■□□□□ 0.26
AC006001.3-201ENST00000449307 IRX6P78412 446 aaPredicted RBP16.68■□□□□ 0.26
AC006001.3-201ENST00000449307 CASC1Q6TDU7 716 aa16.68■□□□□ 0.26
AC006001.3-201ENST00000449307 GGT6Q6P531 493 aa16.68■□□□□ 0.26
AC006001.3-201ENST00000449307 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
AC006001.3-201ENST00000449307 SRPK2P78362 688 aaKnown RBP16.67■□□□□ 0.26
AC006001.3-201ENST00000449307 STK26Q9P289 416 aa16.66■□□□□ 0.26
AC006001.3-201ENST00000449307 BAZ1BQ9UIG0 1483 aaKnown RBP16.66■□□□□ 0.26
AC006001.3-201ENST00000449307 KANK1Q14678 1352 aa16.66■□□□□ 0.26
AC006001.3-201ENST00000449307 CARD11Q9BXL7 1154 aa16.66■□□□□ 0.26
AC006001.3-201ENST00000449307 FGD1P98174 961 aa16.64■□□□□ 0.25
AC006001.3-201ENST00000449307 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.62■□□□□ 0.25
AC006001.3-201ENST00000449307 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
AC006001.3-201ENST00000449307 CLIP1P30622 1438 aa16.59■□□□□ 0.25
AC006001.3-201ENST00000449307 KCNJ4P48050 445 aa16.59■□□□□ 0.25
AC006001.3-201ENST00000449307 NBR1Q14596 966 aa16.59■□□□□ 0.25
AC006001.3-201ENST00000449307 CC2D1BQ5T0F9 858 aaKnown RBP16.58■□□□□ 0.25
AC006001.3-201ENST00000449307 G3V3G9 751 aa16.58■□□□□ 0.24
AC006001.3-201ENST00000449307 DCAF8Q5TAQ9 597 aa16.58■□□□□ 0.24
AC006001.3-201ENST00000449307 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
AC006001.3-201ENST00000449307 FRAT1Q92837 279 aaPredicted RBP16.55■□□□□ 0.24
AC006001.3-201ENST00000449307 MEX3CQ5U5Q3 659 aaKnown RBP16.54■□□□□ 0.24
AC006001.3-201ENST00000449307 RTF1Q92541 710 aaKnown RBP16.54■□□□□ 0.24
AC006001.3-201ENST00000449307 CCNB3Q8WWL7 1395 aa16.52■□□□□ 0.23
AC006001.3-201ENST00000449307 PNNQ9H307 717 aaKnown RBP16.51■□□□□ 0.23
AC006001.3-201ENST00000449307 MSH5O43196 834 aa16.51■□□□□ 0.23
AC006001.3-201ENST00000449307 BECN1Q14457 450 aa16.49■□□□□ 0.23
AC006001.3-201ENST00000449307 KIF27Q86VH2 1401 aa16.48■□□□□ 0.23
AC006001.3-201ENST00000449307 GOLGA6L22H0YM25 854 aa16.48■□□□□ 0.23
AC006001.3-201ENST00000449307 EID1Q9Y6B2 187 aa16.47■□□□□ 0.23
AC006001.3-201ENST00000449307 DCAF11Q8TEB1 546 aa16.47■□□□□ 0.23
AC006001.3-201ENST00000449307 KLHL34Q8N239 644 aa16.44■□□□□ 0.22
AC006001.3-201ENST00000449307 HDGFL2Q7Z4V5 671 aaPredicted RBP16.44■□□□□ 0.22
AC006001.3-201ENST00000449307 ACIN1Q9UKV3 1341 aaKnown RBP16.43■□□□□ 0.22
AC006001.3-201ENST00000449307 PTMAP06454 111 aaKnown RBP16.43■□□□□ 0.22
AC006001.3-201ENST00000449307 CHMP3Q9Y3E7 222 aa16.43■□□□□ 0.22
AC006001.3-201ENST00000449307 PLCB2Q00722 1185 aa16.42■□□□□ 0.22
AC006001.3-201ENST00000449307 NUTM2DQ5VT03 806 aaPredicted RBP16.42■□□□□ 0.22
AC006001.3-201ENST00000449307 MORC1Q86VD1 984 aa16.42■□□□□ 0.22
AC006001.3-201ENST00000449307 AMER1Q5JTC6 1135 aaPredicted RBP16.42■□□□□ 0.22
AC006001.3-201ENST00000449307 PRM3Q9NNZ6 103 aa16.41■□□□□ 0.22
AC006001.3-201ENST00000449307 TMF1P82094 1093 aa16.41■□□□□ 0.22
AC006001.3-201ENST00000449307 NUTM2FA1L443 756 aa16.4■□□□□ 0.22
AC006001.3-201ENST00000449307 CCDC180Q9P1Z9 1646 aa16.4■□□□□ 0.22
AC006001.3-201ENST00000449307 GOLGA3Q08378 1498 aa16.4■□□□□ 0.22
AC006001.3-201ENST00000449307 TAF7LQ5H9L4 462 aa16.39■□□□□ 0.21
AC006001.3-201ENST00000449307 GTF2E1P29083 439 aaPredicted RBP16.38■□□□□ 0.21
AC006001.3-201ENST00000449307 WRNQ14191 1432 aaPredicted RBP eCLIP16.38■□□□□ 0.21
AC006001.3-201ENST00000449307 EVA1CP58658 441 aa16.38■□□□□ 0.21
AC006001.3-201ENST00000449307 GNL2Q13823 731 aaKnown RBP16.38■□□□□ 0.21
AC006001.3-201ENST00000449307 APBB1O00213 710 aa16.37■□□□□ 0.21
AC006001.3-201ENST00000449307 NGDNQ8NEJ9 315 aaKnown RBP16.37■□□□□ 0.21
AC006001.3-201ENST00000449307 TRIM44Q96DX7 344 aaPredicted RBP16.37■□□□□ 0.21
AC006001.3-201ENST00000449307 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms