RNA–Protein interactions for RNA: ENST00000448325.1

RAB28P3-201, Transcript of RAB28, member RAS oncogene family pseudogene 3, humanhuman

BASIC

Gene RAB28P3, Length 597 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P3-201ENST00000448325 STAG3Q9UJ98 1225 aa11.3□□□□□ -0.6
RAB28P3-201ENST00000448325 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
RAB28P3-201ENST00000448325 NBR1Q14596 966 aa11.29□□□□□ -0.6
RAB28P3-201ENST00000448325 DNAJC5Q9H3Z4 198 aa11.28□□□□□ -0.6
RAB28P3-201ENST00000448325 TULP1O00294 542 aaPredicted RBP11.25□□□□□ -0.61
RAB28P3-201ENST00000448325 MIER1Q8N108 512 aa11.25□□□□□ -0.61
RAB28P3-201ENST00000448325 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
RAB28P3-201ENST00000448325 POTEMA6NI47 508 aa11.24□□□□□ -0.61
RAB28P3-201ENST00000448325 ZNF692Q9BU19 519 aaPredicted RBP11.23□□□□□ -0.61
RAB28P3-201ENST00000448325 POTEIP0CG38 1075 aa11.17□□□□□ -0.62
RAB28P3-201ENST00000448325 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
RAB28P3-201ENST00000448325 GTF3C3Q9Y5Q9 886 aa11.17□□□□□ -0.62
RAB28P3-201ENST00000448325 POTEGQ6S5H5 508 aa11.16□□□□□ -0.62
RAB28P3-201ENST00000448325 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
RAB28P3-201ENST00000448325 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
RAB28P3-201ENST00000448325 PABPN1Q86U42 306 aaKnown RBP eCLIP11.14□□□□□ -0.63
RAB28P3-201ENST00000448325 SSUH2Q9Y2M2 353 aa11.13□□□□□ -0.63
RAB28P3-201ENST00000448325 SPDYE1Q8NFV5 336 aaPredicted RBP11.1□□□□□ -0.63
RAB28P3-201ENST00000448325 SPDYE2BA6NHP3 402 aa11.08□□□□□ -0.64
RAB28P3-201ENST00000448325 SPDYE6P0CI01 402 aa11.08□□□□□ -0.64
RAB28P3-201ENST00000448325 SPDYE2Q495Y8 402 aa11.08□□□□□ -0.64
RAB28P3-201ENST00000448325 DCBLD2Q96PD2 775 aa11.08□□□□□ -0.64
RAB28P3-201ENST00000448325 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
RAB28P3-201ENST00000448325 NKX1-1Q15270 411 aaPredicted RBP11.06□□□□□ -0.64
RAB28P3-201ENST00000448325 TRIM41Q8WV44 630 aa11.05□□□□□ -0.64
RAB28P3-201ENST00000448325 CLCN6P51797 869 aa11.04□□□□□ -0.64
RAB28P3-201ENST00000448325 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
RAB28P3-201ENST00000448325 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
RAB28P3-201ENST00000448325 GTPBP6O43824 516 aaPredicted RBP11.01□□□□□ -0.65
RAB28P3-201ENST00000448325 OTUD5Q96G74 571 aa11□□□□□ -0.65
RAB28P3-201ENST00000448325 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
RAB28P3-201ENST00000448325 ARXQ96QS3 562 aa10.98□□□□□ -0.65
RAB28P3-201ENST00000448325 CD44P16070 742 aaKnown RBP10.95□□□□□ -0.66
RAB28P3-201ENST00000448325 TMEM132AQ24JP5 1023 aa10.95□□□□□ -0.66
RAB28P3-201ENST00000448325 GSE1Q14687 1217 aa10.93□□□□□ -0.66
RAB28P3-201ENST00000448325 ERICH6Q7L0X2 663 aa10.93□□□□□ -0.66
RAB28P3-201ENST00000448325 RIOK3O14730 519 aaKnown RBP10.92□□□□□ -0.66
RAB28P3-201ENST00000448325 DAXXQ9UER7 740 aaPredicted RBP10.91□□□□□ -0.66
RAB28P3-201ENST00000448325 STK25O00506 426 aa10.88□□□□□ -0.67
RAB28P3-201ENST00000448325 NUBP1P53384 320 aa10.88□□□□□ -0.67
RAB28P3-201ENST00000448325 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
RAB28P3-201ENST00000448325 C14orf37Q86TY3 774 aa10.85□□□□□ -0.67
RAB28P3-201ENST00000448325 VGFO15240 615 aaPredicted RBP10.82□□□□□ -0.68
RAB28P3-201ENST00000448325 PRR29P0C7W0 189 aa10.82□□□□□ -0.68
RAB28P3-201ENST00000448325 POTEB2H3BUK9 544 aa10.78□□□□□ -0.68
RAB28P3-201ENST00000448325 HOMEZQ8IX15 550 aa10.78□□□□□ -0.68
RAB28P3-201ENST00000448325 STK24Q9Y6E0 443 aa10.78□□□□□ -0.68
RAB28P3-201ENST00000448325 BCL11BQ9C0K0 894 aaPredicted RBP10.77□□□□□ -0.69
RAB28P3-201ENST00000448325 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.75□□□□□ -0.69
RAB28P3-201ENST00000448325 ZFP91Q96JP5 570 aaPredicted RBP10.75□□□□□ -0.69
RAB28P3-201ENST00000448325 LMOD2Q6P5Q4 547 aa10.74□□□□□ -0.69
RAB28P3-201ENST00000448325 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.74□□□□□ -0.69
RAB28P3-201ENST00000448325 P3H3Q8IVL6 736 aa10.74□□□□□ -0.69
RAB28P3-201ENST00000448325 FARP1Q9Y4F1 1045 aaPredicted RBP10.73□□□□□ -0.69
RAB28P3-201ENST00000448325 KCNV2Q8TDN2 545 aa10.71□□□□□ -0.69
RAB28P3-201ENST00000448325 FAM212AQ96EL1 285 aa10.71□□□□□ -0.69
RAB28P3-201ENST00000448325 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
RAB28P3-201ENST00000448325 CHRM1P11229 460 aaPredicted RBP10.7□□□□□ -0.7
RAB28P3-201ENST00000448325 RYDENQ9NUL5 291 aaKnown RBP10.7□□□□□ -0.7
RAB28P3-201ENST00000448325 BRPF1P55201 1214 aaPredicted RBP10.69□□□□□ -0.7
RAB28P3-201ENST00000448325 CADPS2Q86UW7 1296 aa10.69□□□□□ -0.7
RAB28P3-201ENST00000448325 ZNF579Q8NAF0 562 aaKnown RBP10.69□□□□□ -0.7
RAB28P3-201ENST00000448325 FAM163AQ96GL9 167 aaPredicted RBP10.68□□□□□ -0.7
RAB28P3-201ENST00000448325 RASEFQ8IZ41 740 aa10.66□□□□□ -0.7
RAB28P3-201ENST00000448325 WDR70Q9NW82 654 aa10.66□□□□□ -0.7
RAB28P3-201ENST00000448325 CREBZFQ9NS37 354 aa10.64□□□□□ -0.71
RAB28P3-201ENST00000448325 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
RAB28P3-201ENST00000448325 PYGBP11216 843 aa10.63□□□□□ -0.71
RAB28P3-201ENST00000448325 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
RAB28P3-201ENST00000448325 SUPT5HO00267 1087 aaKnown RBP10.62□□□□□ -0.71
RAB28P3-201ENST00000448325 GALR2O43603 387 aaPredicted RBP10.62□□□□□ -0.71
RAB28P3-201ENST00000448325 MAMSTRQ6ZN01 415 aa10.62□□□□□ -0.71
RAB28P3-201ENST00000448325 LCE2DQ5TA82 110 aaPredicted RBP10.58□□□□□ -0.72
RAB28P3-201ENST00000448325 NEUROD2Q15784 382 aa10.57□□□□□ -0.72
RAB28P3-201ENST00000448325 ZC3H15Q8WU90 426 aaKnown RBP10.57□□□□□ -0.72
RAB28P3-201ENST00000448325 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
RAB28P3-201ENST00000448325 SLC24A3Q9HC58 644 aa10.54□□□□□ -0.72
RAB28P3-201ENST00000448325 SCUBE2Q9NQ36 999 aa10.5□□□□□ -0.73
RAB28P3-201ENST00000448325 ARHGEF1Q92888 912 aaKnown RBP10.49□□□□□ -0.73
RAB28P3-201ENST00000448325 METRNQ9UJH8 293 aa10.49□□□□□ -0.73
RAB28P3-201ENST00000448325 SEMA3EO15041 775 aa10.47□□□□□ -0.73
RAB28P3-201ENST00000448325 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
RAB28P3-201ENST00000448325 TESPA1A2RU30 521 aaPredicted RBP10.44□□□□□ -0.74
RAB28P3-201ENST00000448325 C7P10643 843 aa10.44□□□□□ -0.74
RAB28P3-201ENST00000448325 SLC39A7Q92504 469 aa10.44□□□□□ -0.74
RAB28P3-201ENST00000448325 MFRPQ9BY79 579 aa10.44□□□□□ -0.74
RAB28P3-201ENST00000448325 POTEJP0CG39 1038 aa10.43□□□□□ -0.74
RAB28P3-201ENST00000448325 PAK3O75914 559 aaPredicted RBP10.42□□□□□ -0.74
RAB28P3-201ENST00000448325 E2F4Q16254 413 aa10.42□□□□□ -0.74
RAB28P3-201ENST00000448325 PPP1R37O75864 691 aa10.41□□□□□ -0.74
RAB28P3-201ENST00000448325 PDAP1Q13442 181 aaKnown RBP10.4□□□□□ -0.74
RAB28P3-201ENST00000448325 ZNF467Q7Z7K2 595 aaPredicted RBP10.4□□□□□ -0.74
RAB28P3-201ENST00000448325 PCDHB8Q9UN66 801 aa10.4□□□□□ -0.74
RAB28P3-201ENST00000448325 PCDHB13Q9Y5F0 798 aa10.4□□□□□ -0.74
RAB28P3-201ENST00000448325 ZMYND10O75800 440 aa10.38□□□□□ -0.75
RAB28P3-201ENST00000448325 MMRN1Q13201 1228 aa10.38□□□□□ -0.75
RAB28P3-201ENST00000448325 PHF12Q96QT6 1004 aa10.36□□□□□ -0.75
RAB28P3-201ENST00000448325 TSPYL2Q9H2G4 693 aaPredicted RBP10.36□□□□□ -0.75
RAB28P3-201ENST00000448325 PODXL2Q9NZ53 605 aa10.35□□□□□ -0.75
RAB28P3-201ENST00000448325 UBTFP17480 764 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms