RNA–Protein interactions for RNA: ENST00000448325.1

RAB28P3-201, Transcript of RAB28, member RAS oncogene family pseudogene 3, humanhuman

BASIC

Gene RAB28P3, Length 597 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P3-201ENST00000448325 STAG3Q9UJ98 1225 aa11.3□□□□□ -0.6
RAB28P3-201ENST00000448325 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
RAB28P3-201ENST00000448325 NBR1Q14596 966 aa11.29□□□□□ -0.6
RAB28P3-201ENST00000448325 DNAJC5Q9H3Z4 198 aa11.28□□□□□ -0.6
RAB28P3-201ENST00000448325 TULP1O00294 542 aaPredicted RBP11.25□□□□□ -0.61
RAB28P3-201ENST00000448325 MIER1Q8N108 512 aa11.25□□□□□ -0.61
RAB28P3-201ENST00000448325 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
RAB28P3-201ENST00000448325 POTEMA6NI47 508 aa11.24□□□□□ -0.61
RAB28P3-201ENST00000448325 ZNF692Q9BU19 519 aaPredicted RBP11.23□□□□□ -0.61
RAB28P3-201ENST00000448325 POTEIP0CG38 1075 aa11.17□□□□□ -0.62
RAB28P3-201ENST00000448325 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
RAB28P3-201ENST00000448325 GTF3C3Q9Y5Q9 886 aa11.17□□□□□ -0.62
RAB28P3-201ENST00000448325 POTEGQ6S5H5 508 aa11.16□□□□□ -0.62
RAB28P3-201ENST00000448325 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
RAB28P3-201ENST00000448325 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
RAB28P3-201ENST00000448325 PABPN1Q86U42 306 aaKnown RBP eCLIP11.14□□□□□ -0.63
RAB28P3-201ENST00000448325 SSUH2Q9Y2M2 353 aa11.13□□□□□ -0.63
RAB28P3-201ENST00000448325 SPDYE1Q8NFV5 336 aaPredicted RBP11.1□□□□□ -0.63
RAB28P3-201ENST00000448325 SPDYE2BA6NHP3 402 aa11.08□□□□□ -0.64
RAB28P3-201ENST00000448325 SPDYE6P0CI01 402 aa11.08□□□□□ -0.64
RAB28P3-201ENST00000448325 SPDYE2Q495Y8 402 aa11.08□□□□□ -0.64
RAB28P3-201ENST00000448325 DCBLD2Q96PD2 775 aa11.08□□□□□ -0.64
RAB28P3-201ENST00000448325 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
RAB28P3-201ENST00000448325 NKX1-1Q15270 411 aaPredicted RBP11.06□□□□□ -0.64
RAB28P3-201ENST00000448325 TRIM41Q8WV44 630 aa11.05□□□□□ -0.64
RAB28P3-201ENST00000448325 CLCN6P51797 869 aa11.04□□□□□ -0.64
RAB28P3-201ENST00000448325 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
RAB28P3-201ENST00000448325 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
RAB28P3-201ENST00000448325 GTPBP6O43824 516 aaPredicted RBP11.01□□□□□ -0.65
RAB28P3-201ENST00000448325 OTUD5Q96G74 571 aa11□□□□□ -0.65
RAB28P3-201ENST00000448325 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
RAB28P3-201ENST00000448325 ARXQ96QS3 562 aa10.98□□□□□ -0.65
RAB28P3-201ENST00000448325 CD44P16070 742 aaKnown RBP10.95□□□□□ -0.66
RAB28P3-201ENST00000448325 TMEM132AQ24JP5 1023 aa10.95□□□□□ -0.66
RAB28P3-201ENST00000448325 GSE1Q14687 1217 aa10.93□□□□□ -0.66
RAB28P3-201ENST00000448325 ERICH6Q7L0X2 663 aa10.93□□□□□ -0.66
RAB28P3-201ENST00000448325 RIOK3O14730 519 aaKnown RBP10.92□□□□□ -0.66
RAB28P3-201ENST00000448325 DAXXQ9UER7 740 aaPredicted RBP10.91□□□□□ -0.66
RAB28P3-201ENST00000448325 STK25O00506 426 aa10.88□□□□□ -0.67
RAB28P3-201ENST00000448325 NUBP1P53384 320 aa10.88□□□□□ -0.67
RAB28P3-201ENST00000448325 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
RAB28P3-201ENST00000448325 C14orf37Q86TY3 774 aa10.85□□□□□ -0.67
RAB28P3-201ENST00000448325 VGFO15240 615 aaPredicted RBP10.82□□□□□ -0.68
RAB28P3-201ENST00000448325 PRR29P0C7W0 189 aa10.82□□□□□ -0.68
RAB28P3-201ENST00000448325 POTEB2H3BUK9 544 aa10.78□□□□□ -0.68
RAB28P3-201ENST00000448325 HOMEZQ8IX15 550 aa10.78□□□□□ -0.68
RAB28P3-201ENST00000448325 STK24Q9Y6E0 443 aa10.78□□□□□ -0.68
RAB28P3-201ENST00000448325 BCL11BQ9C0K0 894 aaPredicted RBP10.77□□□□□ -0.69
RAB28P3-201ENST00000448325 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.75□□□□□ -0.69
RAB28P3-201ENST00000448325 ZFP91Q96JP5 570 aaPredicted RBP10.75□□□□□ -0.69
RAB28P3-201ENST00000448325 LMOD2Q6P5Q4 547 aa10.74□□□□□ -0.69
RAB28P3-201ENST00000448325 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.74□□□□□ -0.69
RAB28P3-201ENST00000448325 P3H3Q8IVL6 736 aa10.74□□□□□ -0.69
RAB28P3-201ENST00000448325 FARP1Q9Y4F1 1045 aaPredicted RBP10.73□□□□□ -0.69
RAB28P3-201ENST00000448325 KCNV2Q8TDN2 545 aa10.71□□□□□ -0.69
RAB28P3-201ENST00000448325 FAM212AQ96EL1 285 aa10.71□□□□□ -0.69
RAB28P3-201ENST00000448325 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
RAB28P3-201ENST00000448325 CHRM1P11229 460 aaPredicted RBP10.7□□□□□ -0.7
RAB28P3-201ENST00000448325 RYDENQ9NUL5 291 aaKnown RBP10.7□□□□□ -0.7
RAB28P3-201ENST00000448325 BRPF1P55201 1214 aaPredicted RBP10.69□□□□□ -0.7
RAB28P3-201ENST00000448325 CADPS2Q86UW7 1296 aa10.69□□□□□ -0.7
RAB28P3-201ENST00000448325 ZNF579Q8NAF0 562 aaKnown RBP10.69□□□□□ -0.7
RAB28P3-201ENST00000448325 FAM163AQ96GL9 167 aaPredicted RBP10.68□□□□□ -0.7
RAB28P3-201ENST00000448325 RASEFQ8IZ41 740 aa10.66□□□□□ -0.7
RAB28P3-201ENST00000448325 WDR70Q9NW82 654 aa10.66□□□□□ -0.7
RAB28P3-201ENST00000448325 CREBZFQ9NS37 354 aa10.64□□□□□ -0.71
RAB28P3-201ENST00000448325 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
RAB28P3-201ENST00000448325 PYGBP11216 843 aa10.63□□□□□ -0.71
RAB28P3-201ENST00000448325 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
RAB28P3-201ENST00000448325 SUPT5HO00267 1087 aaKnown RBP10.62□□□□□ -0.71
RAB28P3-201ENST00000448325 GALR2O43603 387 aaPredicted RBP10.62□□□□□ -0.71
RAB28P3-201ENST00000448325 MAMSTRQ6ZN01 415 aa10.62□□□□□ -0.71
RAB28P3-201ENST00000448325 LCE2DQ5TA82 110 aaPredicted RBP10.58□□□□□ -0.72
RAB28P3-201ENST00000448325 NEUROD2Q15784 382 aa10.57□□□□□ -0.72
RAB28P3-201ENST00000448325 ZC3H15Q8WU90 426 aaKnown RBP10.57□□□□□ -0.72
RAB28P3-201ENST00000448325 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
RAB28P3-201ENST00000448325 SLC24A3Q9HC58 644 aa10.54□□□□□ -0.72
RAB28P3-201ENST00000448325 SCUBE2Q9NQ36 999 aa10.5□□□□□ -0.73
RAB28P3-201ENST00000448325 ARHGEF1Q92888 912 aaKnown RBP10.49□□□□□ -0.73
RAB28P3-201ENST00000448325 METRNQ9UJH8 293 aa10.49□□□□□ -0.73
RAB28P3-201ENST00000448325 SEMA3EO15041 775 aa10.47□□□□□ -0.73
RAB28P3-201ENST00000448325 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
RAB28P3-201ENST00000448325 TESPA1A2RU30 521 aaPredicted RBP10.44□□□□□ -0.74
RAB28P3-201ENST00000448325 C7P10643 843 aa10.44□□□□□ -0.74
RAB28P3-201ENST00000448325 SLC39A7Q92504 469 aa10.44□□□□□ -0.74
RAB28P3-201ENST00000448325 MFRPQ9BY79 579 aa10.44□□□□□ -0.74
RAB28P3-201ENST00000448325 POTEJP0CG39 1038 aa10.43□□□□□ -0.74
RAB28P3-201ENST00000448325 PAK3O75914 559 aaPredicted RBP10.42□□□□□ -0.74
RAB28P3-201ENST00000448325 E2F4Q16254 413 aa10.42□□□□□ -0.74
RAB28P3-201ENST00000448325 PPP1R37O75864 691 aa10.41□□□□□ -0.74
RAB28P3-201ENST00000448325 PDAP1Q13442 181 aaKnown RBP10.4□□□□□ -0.74
RAB28P3-201ENST00000448325 ZNF467Q7Z7K2 595 aaPredicted RBP10.4□□□□□ -0.74
RAB28P3-201ENST00000448325 PCDHB8Q9UN66 801 aa10.4□□□□□ -0.74
RAB28P3-201ENST00000448325 PCDHB13Q9Y5F0 798 aa10.4□□□□□ -0.74
RAB28P3-201ENST00000448325 ZMYND10O75800 440 aa10.38□□□□□ -0.75
RAB28P3-201ENST00000448325 MMRN1Q13201 1228 aa10.38□□□□□ -0.75
RAB28P3-201ENST00000448325 PHF12Q96QT6 1004 aa10.36□□□□□ -0.75
RAB28P3-201ENST00000448325 TSPYL2Q9H2G4 693 aaPredicted RBP10.36□□□□□ -0.75
RAB28P3-201ENST00000448325 PODXL2Q9NZ53 605 aa10.35□□□□□ -0.75
RAB28P3-201ENST00000448325 UBTFP17480 764 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms