RNA–Protein interactions for RNA: ENST00000442978.1

RAB11AP1-201, Transcript of RAB11A, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB11AP1, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP1-201ENST00000442978 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
RAB11AP1-201ENST00000442978 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
RAB11AP1-201ENST00000442978 METRNQ9UJH8 293 aa12.58□□□□□ -0.4
RAB11AP1-201ENST00000442978 MIER1Q8N108 512 aa12.56□□□□□ -0.4
RAB11AP1-201ENST00000442978 SLC39A7Q92504 469 aa12.54□□□□□ -0.4
RAB11AP1-201ENST00000442978 KIF12Q96FN5 646 aa12.52□□□□□ -0.41
RAB11AP1-201ENST00000442978 C7P10643 843 aa12.5□□□□□ -0.41
RAB11AP1-201ENST00000442978 RASEFQ8IZ41 740 aa12.5□□□□□ -0.41
RAB11AP1-201ENST00000442978 ATN1P54259 1190 aaPredicted RBP12.49□□□□□ -0.41
RAB11AP1-201ENST00000442978 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
RAB11AP1-201ENST00000442978 TRPC6Q9Y210 931 aa12.46□□□□□ -0.41
RAB11AP1-201ENST00000442978 MAP3K13O43283 966 aa12.45□□□□□ -0.42
RAB11AP1-201ENST00000442978 BMP2KQ9NSY1 1161 aaPredicted RBP12.44□□□□□ -0.42
RAB11AP1-201ENST00000442978 POTEJP0CG39 1038 aa12.43□□□□□ -0.42
RAB11AP1-201ENST00000442978 PLSCR2Q9NRY7 297 aa12.42□□□□□ -0.42
RAB11AP1-201ENST00000442978 TIE1P35590 1138 aa12.39□□□□□ -0.43
RAB11AP1-201ENST00000442978 POTEMA6NI47 508 aa12.37□□□□□ -0.43
RAB11AP1-201ENST00000442978 FKBP8Q14318 412 aa12.37□□□□□ -0.43
RAB11AP1-201ENST00000442978 MAMSTRQ6ZN01 415 aa12.37□□□□□ -0.43
RAB11AP1-201ENST00000442978 ZBTB47Q9UFB7 747 aaPredicted RBP12.37□□□□□ -0.43
RAB11AP1-201ENST00000442978 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
RAB11AP1-201ENST00000442978 TTLL13PA6NNM8 815 aa12.33□□□□□ -0.44
RAB11AP1-201ENST00000442978 NUBP1P53384 320 aa12.33□□□□□ -0.44
RAB11AP1-201ENST00000442978 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
RAB11AP1-201ENST00000442978 SCUBE2Q9NQ36 999 aa12.33□□□□□ -0.44
RAB11AP1-201ENST00000442978 PCDHB13Q9Y5F0 798 aa12.32□□□□□ -0.44
RAB11AP1-201ENST00000442978 SGIP1Q9BQI5 828 aa12.29□□□□□ -0.44
RAB11AP1-201ENST00000442978 FAM212AQ96EL1 285 aa12.28□□□□□ -0.44
RAB11AP1-201ENST00000442978 TRIM35Q9UPQ4 493 aa12.27□□□□□ -0.45
RAB11AP1-201ENST00000442978 SEC24BO95487 1268 aa12.26□□□□□ -0.45
RAB11AP1-201ENST00000442978 COLQQ9Y215 455 aaPredicted RBP12.25□□□□□ -0.45
RAB11AP1-201ENST00000442978 IFNL1Q8IU54 200 aa12.24□□□□□ -0.45
RAB11AP1-201ENST00000442978 LCE2DQ5TA82 110 aaPredicted RBP12.21□□□□□ -0.45
RAB11AP1-201ENST00000442978 IER5LQ5T953 404 aa12.2□□□□□ -0.46
RAB11AP1-201ENST00000442978 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
RAB11AP1-201ENST00000442978 TMEM106CQ9BVX2 250 aa12.17□□□□□ -0.46
RAB11AP1-201ENST00000442978 DCAF8Q5TAQ9 597 aa12.14□□□□□ -0.47
RAB11AP1-201ENST00000442978 FBXO3Q9UK99 471 aa12.13□□□□□ -0.47
RAB11AP1-201ENST00000442978 PYGBP11216 843 aa12.12□□□□□ -0.47
RAB11AP1-201ENST00000442978 PCDH10Q9P2E7 1040 aa12.11□□□□□ -0.47
RAB11AP1-201ENST00000442978 PLCG2P16885 1265 aa12.09□□□□□ -0.47
RAB11AP1-201ENST00000442978 IRX5P78411 483 aaPredicted RBP12.05□□□□□ -0.48
RAB11AP1-201ENST00000442978 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
RAB11AP1-201ENST00000442978 PCDHB8Q9UN66 801 aa12.04□□□□□ -0.48
RAB11AP1-201ENST00000442978 VASPP50552 380 aaPredicted RBP12.01□□□□□ -0.49
RAB11AP1-201ENST00000442978 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
RAB11AP1-201ENST00000442978 OCEL1Q9H607 264 aa11.97□□□□□ -0.49
RAB11AP1-201ENST00000442978 GSE1Q14687 1217 aa11.96□□□□□ -0.49
RAB11AP1-201ENST00000442978 ST18O60284 1047 aa11.93□□□□□ -0.5
RAB11AP1-201ENST00000442978 ZNF467Q7Z7K2 595 aaPredicted RBP11.93□□□□□ -0.5
RAB11AP1-201ENST00000442978 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
RAB11AP1-201ENST00000442978 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.89□□□□□ -0.51
RAB11AP1-201ENST00000442978 GOLGA2Q08379 1002 aa11.87□□□□□ -0.51
RAB11AP1-201ENST00000442978 PDCD7Q8N8D1 485 aaKnown RBP11.86□□□□□ -0.51
RAB11AP1-201ENST00000442978 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
RAB11AP1-201ENST00000442978 CHRM1P11229 460 aaPredicted RBP11.83□□□□□ -0.52
RAB11AP1-201ENST00000442978 PSEN1P49768 467 aa11.83□□□□□ -0.52
RAB11AP1-201ENST00000442978 C3orf67Q6ZVT6 689 aa11.81□□□□□ -0.52
RAB11AP1-201ENST00000442978 SNPHO15079 494 aa11.8□□□□□ -0.52
RAB11AP1-201ENST00000442978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.52
RAB11AP1-201ENST00000442978 TMEM121BQ9BXQ6 578 aaPredicted RBP11.78□□□□□ -0.52
RAB11AP1-201ENST00000442978 IFNLR1Q8IU57 520 aaPredicted RBP11.77□□□□□ -0.53
RAB11AP1-201ENST00000442978 SPOCK2Q92563 424 aa11.77□□□□□ -0.53
RAB11AP1-201ENST00000442978 L3MBTL3Q96JM7 780 aaPredicted RBP11.77□□□□□ -0.53
RAB11AP1-201ENST00000442978 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
RAB11AP1-201ENST00000442978 PDAP1Q13442 181 aaKnown RBP11.76□□□□□ -0.53
RAB11AP1-201ENST00000442978 MARVELD3Q96A59 401 aa11.73□□□□□ -0.53
RAB11AP1-201ENST00000442978 CABP2Q9NPB3 220 aa11.71□□□□□ -0.53
RAB11AP1-201ENST00000442978 ILDR1Q86SU0 546 aaPredicted RBP11.68□□□□□ -0.54
RAB11AP1-201ENST00000442978 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
RAB11AP1-201ENST00000442978 EMP3P54852 163 aa11.65□□□□□ -0.54
RAB11AP1-201ENST00000442978 G3V3G9 751 aa11.63□□□□□ -0.55
RAB11AP1-201ENST00000442978 SPNS2Q8IVW8 549 aa11.61□□□□□ -0.55
RAB11AP1-201ENST00000442978 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
RAB11AP1-201ENST00000442978 MMRN1Q13201 1228 aa11.6□□□□□ -0.55
RAB11AP1-201ENST00000442978 HS3ST6Q96QI5 342 aa11.57□□□□□ -0.56
RAB11AP1-201ENST00000442978 FAM205CA6NFA0 338 aa11.56□□□□□ -0.56
RAB11AP1-201ENST00000442978 TRIM41Q8WV44 630 aa11.55□□□□□ -0.56
RAB11AP1-201ENST00000442978 EFCAB3Q8N7B9 438 aa11.54□□□□□ -0.56
RAB11AP1-201ENST00000442978 POTEB3A0JP26 581 aa11.53□□□□□ -0.56
RAB11AP1-201ENST00000442978 POTEBQ6S5H4 581 aa11.53□□□□□ -0.56
RAB11AP1-201ENST00000442978 HOXB3P14651 431 aaPredicted RBP11.51□□□□□ -0.57
RAB11AP1-201ENST00000442978 KRTAP3-3Q9BYR6 98 aa11.51□□□□□ -0.57
RAB11AP1-201ENST00000442978 KRTAP3-2Q9BYR7 98 aa11.51□□□□□ -0.57
RAB11AP1-201ENST00000442978 ZNF710Q8N1W2 664 aa11.47□□□□□ -0.57
RAB11AP1-201ENST00000442978 DOK7Q18PE1 504 aa11.45□□□□□ -0.58
RAB11AP1-201ENST00000442978 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
RAB11AP1-201ENST00000442978 RNF25Q96BH1 459 aaPredicted RBP11.44□□□□□ -0.58
RAB11AP1-201ENST00000442978 HOXB1P14653 301 aaPredicted RBP11.43□□□□□ -0.58
RAB11AP1-201ENST00000442978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.42□□□□□ -0.58
RAB11AP1-201ENST00000442978 MICALL2Q8IY33 904 aa11.42□□□□□ -0.58
RAB11AP1-201ENST00000442978 ZFP91Q96JP5 570 aaPredicted RBP11.42□□□□□ -0.58
RAB11AP1-201ENST00000442978 RIMBP2O15034 1052 aa11.39□□□□□ -0.59
RAB11AP1-201ENST00000442978 TMEM92Q6UXU6 159 aa11.39□□□□□ -0.59
RAB11AP1-201ENST00000442978 ERBB3P21860 1342 aa11.38□□□□□ -0.59
RAB11AP1-201ENST00000442978 VGFO15240 615 aaPredicted RBP11.38□□□□□ -0.59
RAB11AP1-201ENST00000442978 SOX12O15370 315 aa11.38□□□□□ -0.59
RAB11AP1-201ENST00000442978 MS4A4AQ96JQ5 239 aa11.38□□□□□ -0.59
RAB11AP1-201ENST00000442978 PHF8Q9UPP1 1060 aa11.37□□□□□ -0.59
RAB11AP1-201ENST00000442978 VARS2Q5ST30 1063 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms