RNA–Protein interactions for RNA: ENST00000442032.2

HMGCR-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 268 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-203ENST00000442032 CLCN6P51797 869 aa23.62■■□□□ 1.37
HMGCR-203ENST00000442032 CCDC61Q9Y6R9 512 aa23.58■■□□□ 1.37
HMGCR-203ENST00000442032 FAM212AQ96EL1 285 aa23.57■■□□□ 1.36
HMGCR-203ENST00000442032 DCAF8Q5TAQ9 597 aa23.51■■□□□ 1.35
HMGCR-203ENST00000442032 SPOCK2Q92563 424 aa23.48■■□□□ 1.35
HMGCR-203ENST00000442032 GALR2O43603 387 aaPredicted RBP23.45■■□□□ 1.34
HMGCR-203ENST00000442032 KIF12Q96FN5 646 aa23.4■■□□□ 1.34
HMGCR-203ENST00000442032 MS4A3Q96HJ5 214 aa23.37■■□□□ 1.33
HMGCR-203ENST00000442032 GSE1Q14687 1217 aa23.34■■□□□ 1.33
HMGCR-203ENST00000442032 MAP3K13O43283 966 aa23.33■■□□□ 1.33
HMGCR-203ENST00000442032 DCBLD2Q96PD2 775 aa23.33■■□□□ 1.33
HMGCR-203ENST00000442032 CIZ1Q9ULV3 898 aaPredicted RBP23.26■■□□□ 1.31
HMGCR-203ENST00000442032 PYGBP11216 843 aa23.25■■□□□ 1.31
HMGCR-203ENST00000442032 POTEIP0CG38 1075 aa23.24■■□□□ 1.31
HMGCR-203ENST00000442032 PCDHB13Q9Y5F0 798 aa23.22■■□□□ 1.31
HMGCR-203ENST00000442032 SGIP1Q9BQI5 828 aa23.16■■□□□ 1.3
HMGCR-203ENST00000442032 IFNL1Q8IU54 200 aa23.09■■□□□ 1.29
HMGCR-203ENST00000442032 TRPC6Q9Y210 931 aa23.08■■□□□ 1.29
HMGCR-203ENST00000442032 CHRM1P11229 460 aaPredicted RBP23.03■■□□□ 1.28
HMGCR-203ENST00000442032 ATMINO43313 823 aaPredicted RBP22.99■■□□□ 1.27
HMGCR-203ENST00000442032 ASTLQ6HA08 431 aaPredicted RBP22.99■■□□□ 1.27
HMGCR-203ENST00000442032 PCDHB8Q9UN66 801 aa22.99■■□□□ 1.27
HMGCR-203ENST00000442032 TIE1P35590 1138 aa22.97■■□□□ 1.27
HMGCR-203ENST00000442032 BMP2KQ9NSY1 1161 aaPredicted RBP22.97■■□□□ 1.27
HMGCR-203ENST00000442032 PELP1Q8IZL8 1130 aaKnown RBP22.93■■□□□ 1.26
HMGCR-203ENST00000442032 ATN1P54259 1190 aaPredicted RBP22.92■■□□□ 1.26
HMGCR-203ENST00000442032 ZNF467Q7Z7K2 595 aaPredicted RBP22.91■■□□□ 1.26
HMGCR-203ENST00000442032 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
HMGCR-203ENST00000442032 TTLL13PA6NNM8 815 aa22.87■■□□□ 1.25
HMGCR-203ENST00000442032 TMEM106CQ9BVX2 250 aa22.84■■□□□ 1.25
HMGCR-203ENST00000442032 SLC39A7Q92504 469 aa22.77■■□□□ 1.24
HMGCR-203ENST00000442032 TRIM35Q9UPQ4 493 aa22.74■■□□□ 1.23
HMGCR-203ENST00000442032 METRNQ9UJH8 293 aa22.73■■□□□ 1.23
HMGCR-203ENST00000442032 C7P10643 843 aa22.72■■□□□ 1.23
HMGCR-203ENST00000442032 LHX8Q68G74 356 aa22.71■■□□□ 1.23
HMGCR-203ENST00000442032 PSEN1P49768 467 aa22.7■■□□□ 1.22
HMGCR-203ENST00000442032 PDAP1Q13442 181 aaKnown RBP22.67■■□□□ 1.22
HMGCR-203ENST00000442032 ECM2O94769 699 aaPredicted RBP22.66■■□□□ 1.22
HMGCR-203ENST00000442032 PKD2Q13563 968 aa22.65■■□□□ 1.22
HMGCR-203ENST00000442032 RIOK3O14730 519 aaKnown RBP22.59■■□□□ 1.21
HMGCR-203ENST00000442032 RNF25Q96BH1 459 aaPredicted RBP22.59■■□□□ 1.21
HMGCR-203ENST00000442032 IER5LQ5T953 404 aa22.55■■□□□ 1.2
HMGCR-203ENST00000442032 SEC24BO95487 1268 aa22.54■■□□□ 1.2
HMGCR-203ENST00000442032 GOLGA2Q08379 1002 aa22.52■■□□□ 1.2
HMGCR-203ENST00000442032 POTEB2H3BUK9 544 aa22.5■■□□□ 1.19
HMGCR-203ENST00000442032 POTEFA5A3E0 1075 aa22.48■■□□□ 1.19
HMGCR-203ENST00000442032 COLQQ9Y215 455 aaPredicted RBP22.47■■□□□ 1.19
HMGCR-203ENST00000442032 VGFO15240 615 aaPredicted RBP22.46■■□□□ 1.19
HMGCR-203ENST00000442032 MKRN3Q13064 507 aaKnown RBP22.44■■□□□ 1.18
HMGCR-203ENST00000442032 RGL2O15211 777 aa22.43■■□□□ 1.18
HMGCR-203ENST00000442032 CABP2Q9NPB3 220 aa22.43■■□□□ 1.18
HMGCR-203ENST00000442032 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.4■■□□□ 1.18
HMGCR-203ENST00000442032 PLCG2P16885 1265 aa22.4■■□□□ 1.18
HMGCR-203ENST00000442032 ZFP91Q96JP5 570 aaPredicted RBP22.4■■□□□ 1.18
HMGCR-203ENST00000442032 TAOK2Q9UL54 1235 aa22.39■■□□□ 1.17
HMGCR-203ENST00000442032 IRX5P78411 483 aaPredicted RBP22.38■■□□□ 1.17
HMGCR-203ENST00000442032 OCEL1Q9H607 264 aa22.33■■□□□ 1.17
HMGCR-203ENST00000442032 POTEJP0CG39 1038 aa22.3■■□□□ 1.16
HMGCR-203ENST00000442032 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.28■■□□□ 1.16
HMGCR-203ENST00000442032 OTUD5Q96G74 571 aa22.25■■□□□ 1.15
HMGCR-203ENST00000442032 EFCAB3Q8N7B9 438 aa22.24■■□□□ 1.15
HMGCR-203ENST00000442032 BCL11BQ9C0K0 894 aaPredicted RBP22.23■■□□□ 1.15
HMGCR-203ENST00000442032 MAMSTRQ6ZN01 415 aa22.22■■□□□ 1.15
HMGCR-203ENST00000442032 STK24Q9Y6E0 443 aa22.22■■□□□ 1.15
HMGCR-203ENST00000442032 STK25O00506 426 aa22.21■■□□□ 1.15
HMGCR-203ENST00000442032 PDCD7Q8N8D1 485 aaKnown RBP22.18■■□□□ 1.14
HMGCR-203ENST00000442032 SCUBE2Q9NQ36 999 aa22.16■■□□□ 1.14
HMGCR-203ENST00000442032 ILDR1Q86SU0 546 aaPredicted RBP22.1■■□□□ 1.13
HMGCR-203ENST00000442032 SOX12O15370 315 aa22.07■■□□□ 1.12
HMGCR-203ENST00000442032 DPY19L2Q6NUT2 758 aa22.05■■□□□ 1.12
HMGCR-203ENST00000442032 L3MBTL3Q96JM7 780 aaPredicted RBP22.03■■□□□ 1.12
HMGCR-203ENST00000442032 PHF8Q9UPP1 1060 aa22.01■■□□□ 1.11
HMGCR-203ENST00000442032 CHGAP10645 457 aaKnown RBP21.96■■□□□ 1.11
HMGCR-203ENST00000442032 AMER1Q5JTC6 1135 aaPredicted RBP21.95■■□□□ 1.1
HMGCR-203ENST00000442032 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
HMGCR-203ENST00000442032 G3V3G9 751 aa21.93■■□□□ 1.1
HMGCR-203ENST00000442032 HS6ST3Q8IZP7 471 aa21.93■■□□□ 1.1
HMGCR-203ENST00000442032 NLRP6P59044 892 aa21.92■■□□□ 1.1
HMGCR-203ENST00000442032 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.91■■□□□ 1.1
HMGCR-203ENST00000442032 MS4A4AQ96JQ5 239 aa21.89■■□□□ 1.09
HMGCR-203ENST00000442032 C3orf67Q6ZVT6 689 aa21.88■■□□□ 1.09
HMGCR-203ENST00000442032 MFRPQ9BY79 579 aa21.88■■□□□ 1.09
HMGCR-203ENST00000442032 BOLA1Q9Y3E2 137 aa21.88■■□□□ 1.09
HMGCR-203ENST00000442032 SLAIN1Q8ND83 568 aa21.87■■□□□ 1.09
HMGCR-203ENST00000442032 RTN4Q9NQC3 1192 aaKnown RBP21.86■■□□□ 1.09
HMGCR-203ENST00000442032 FBXO22Q8NEZ5 403 aa21.84■■□□□ 1.09
HMGCR-203ENST00000442032 MICALL2Q8IY33 904 aa21.72■■□□□ 1.07
HMGCR-203ENST00000442032 TMEM121BQ9BXQ6 578 aaPredicted RBP21.72■■□□□ 1.07
HMGCR-203ENST00000442032 DNAJC5Q9H3Z4 198 aa21.65■■□□□ 1.06
HMGCR-203ENST00000442032 NKX1-1Q15270 411 aaPredicted RBP21.63■■□□□ 1.05
HMGCR-203ENST00000442032 FAM163AQ96GL9 167 aaPredicted RBP21.62■■□□□ 1.05
HMGCR-203ENST00000442032 PPP1R37O75864 691 aa21.56■■□□□ 1.04
HMGCR-203ENST00000442032 SNPHO15079 494 aa21.51■■□□□ 1.03
HMGCR-203ENST00000442032 RYDENQ9NUL5 291 aaKnown RBP21.49■■□□□ 1.03
HMGCR-203ENST00000442032 TMEM92Q6UXU6 159 aa21.48■■□□□ 1.03
HMGCR-203ENST00000442032 LCE2DQ5TA82 110 aaPredicted RBP21.42■■□□□ 1.02
HMGCR-203ENST00000442032 GTPBP6O43824 516 aaPredicted RBP21.38■■□□□ 1.01
HMGCR-203ENST00000442032 ST18O60284 1047 aa21.38■■□□□ 1.01
HMGCR-203ENST00000442032 BBXQ8WY36 941 aaPredicted RBP21.32■■□□□ 1
HMGCR-203ENST00000442032 POTEMA6NI47 508 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms