RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 PIP4P2Q8N4L2 257 aa8.42□□□□□ -1.06
CDC42BPA-207ENST00000441725 MIER1Q8N108 512 aa8.4□□□□□ -1.06
CDC42BPA-207ENST00000441725 PRR29P0C7W0 189 aa8.39□□□□□ -1.07
CDC42BPA-207ENST00000441725 CIZ1Q9ULV3 898 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-207ENST00000441725 DNAJC5Q9H3Z4 198 aa8.36□□□□□ -1.07
CDC42BPA-207ENST00000441725 NBR1Q14596 966 aa8.34□□□□□ -1.07
CDC42BPA-207ENST00000441725 PRKAR2AP13861 404 aaKnown RBP8.33□□□□□ -1.08
CDC42BPA-207ENST00000441725 HS6ST3Q8IZP7 471 aa8.3□□□□□ -1.08
CDC42BPA-207ENST00000441725 CHADLQ6NUI6 762 aa8.29□□□□□ -1.08
CDC42BPA-207ENST00000441725 RNF25Q96BH1 459 aaPredicted RBP8.27□□□□□ -1.09
CDC42BPA-207ENST00000441725 ZBTB47Q9UFB7 747 aaPredicted RBP8.27□□□□□ -1.09
CDC42BPA-207ENST00000441725 TIMELESSQ9UNS1 1208 aa8.27□□□□□ -1.09
CDC42BPA-207ENST00000441725 CREBZFQ9NS37 354 aa8.26□□□□□ -1.09
CDC42BPA-207ENST00000441725 PLEKHG5O94827 1062 aa8.25□□□□□ -1.09
CDC42BPA-207ENST00000441725 TRIM41Q8WV44 630 aa8.25□□□□□ -1.09
CDC42BPA-207ENST00000441725 NKX1-1Q15270 411 aaPredicted RBP8.24□□□□□ -1.09
CDC42BPA-207ENST00000441725 TULP1O00294 542 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-207ENST00000441725 FARP1Q9Y4F1 1045 aaPredicted RBP8.21□□□□□ -1.1
CDC42BPA-207ENST00000441725 GTPBP6O43824 516 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-207ENST00000441725 GTF3C3Q9Y5Q9 886 aa8.18□□□□□ -1.1
CDC42BPA-207ENST00000441725 HAX1O00165 279 aa8.17□□□□□ -1.1
CDC42BPA-207ENST00000441725 MNX1P50219 401 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-207ENST00000441725 GSE1Q14687 1217 aa8.16□□□□□ -1.1
CDC42BPA-207ENST00000441725 RIOK3O14730 519 aaKnown RBP8.15□□□□□ -1.11
CDC42BPA-207ENST00000441725 NUBP1P53384 320 aa8.14□□□□□ -1.11
CDC42BPA-207ENST00000441725 C19orf67A6NJJ6 358 aa8.14□□□□□ -1.11
CDC42BPA-207ENST00000441725 STK25O00506 426 aa8.12□□□□□ -1.11
CDC42BPA-207ENST00000441725 DCAF8Q5TAQ9 597 aa8.1□□□□□ -1.11
CDC42BPA-207ENST00000441725 EVX2Q03828 476 aa8.09□□□□□ -1.11
CDC42BPA-207ENST00000441725 CD44P16070 742 aaKnown RBP8.08□□□□□ -1.12
CDC42BPA-207ENST00000441725 VGFO15240 615 aaPredicted RBP8.07□□□□□ -1.12
CDC42BPA-207ENST00000441725 TMEM132AQ24JP5 1023 aa8.06□□□□□ -1.12
CDC42BPA-207ENST00000441725 SP7Q8TDD2 431 aaPredicted RBP8.06□□□□□ -1.12
CDC42BPA-207ENST00000441725 BCL11BQ9C0K0 894 aaPredicted RBP8.04□□□□□ -1.12
CDC42BPA-207ENST00000441725 FAM212AQ96EL1 285 aa8.03□□□□□ -1.12
CDC42BPA-207ENST00000441725 STK24Q9Y6E0 443 aa8.03□□□□□ -1.12
CDC42BPA-207ENST00000441725 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.02□□□□□ -1.13
CDC42BPA-207ENST00000441725 ZFP91Q96JP5 570 aaPredicted RBP8.02□□□□□ -1.13
CDC42BPA-207ENST00000441725 PAK3O75914 559 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-207ENST00000441725 ZRANB1Q9UGI0 708 aa8.01□□□□□ -1.13
CDC42BPA-207ENST00000441725 ERICH6Q7L0X2 663 aa8□□□□□ -1.13
CDC42BPA-207ENST00000441725 ARXQ96QS3 562 aa8□□□□□ -1.13
CDC42BPA-207ENST00000441725 SGIP1Q9BQI5 828 aa8□□□□□ -1.13
CDC42BPA-207ENST00000441725 CHRM1P11229 460 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-207ENST00000441725 P3H3Q8IVL6 736 aa7.99□□□□□ -1.13
CDC42BPA-207ENST00000441725 RASEFQ8IZ41 740 aa7.99□□□□□ -1.13
CDC42BPA-207ENST00000441725 RYDENQ9NUL5 291 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-207ENST00000441725 ZNF579Q8NAF0 562 aaKnown RBP7.98□□□□□ -1.13
CDC42BPA-207ENST00000441725 KCNV2Q8TDN2 545 aa7.97□□□□□ -1.13
CDC42BPA-207ENST00000441725 TSPYL2Q9H2G4 693 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-207ENST00000441725 PYGBP11216 843 aa7.95□□□□□ -1.14
CDC42BPA-207ENST00000441725 LMOD2Q6P5Q4 547 aa7.95□□□□□ -1.14
CDC42BPA-207ENST00000441725 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.95□□□□□ -1.14
CDC42BPA-207ENST00000441725 CADPS2Q86UW7 1296 aa7.94□□□□□ -1.14
CDC42BPA-207ENST00000441725 GABBR2O75899 941 aa7.94□□□□□ -1.14
CDC42BPA-207ENST00000441725 C14orf37Q86TY3 774 aa7.94□□□□□ -1.14
CDC42BPA-207ENST00000441725 CCDC61Q9Y6R9 512 aa7.94□□□□□ -1.14
CDC42BPA-207ENST00000441725 CLCN6P51797 869 aa7.93□□□□□ -1.14
CDC42BPA-207ENST00000441725 PHF12Q96QT6 1004 aa7.93□□□□□ -1.14
CDC42BPA-207ENST00000441725 WDR70Q9NW82 654 aa7.91□□□□□ -1.14
CDC42BPA-207ENST00000441725 DAXXQ9UER7 740 aaPredicted RBP7.9□□□□□ -1.15
CDC42BPA-207ENST00000441725 BRPF1P55201 1214 aaPredicted RBP7.89□□□□□ -1.15
CDC42BPA-207ENST00000441725 KIF12Q96FN5 646 aa7.86□□□□□ -1.15
CDC42BPA-207ENST00000441725 GALR2O43603 387 aaPredicted RBP7.86□□□□□ -1.15
CDC42BPA-207ENST00000441725 HOMEZQ8IX15 550 aa7.84□□□□□ -1.15
CDC42BPA-207ENST00000441725 MS4A3Q96HJ5 214 aa7.84□□□□□ -1.15
CDC42BPA-207ENST00000441725 MAP3K13O43283 966 aa7.83□□□□□ -1.16
CDC42BPA-207ENST00000441725 ZC3H15Q8WU90 426 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-207ENST00000441725 MFRPQ9BY79 579 aa7.8□□□□□ -1.16
CDC42BPA-207ENST00000441725 NEUROD2Q15784 382 aa7.79□□□□□ -1.16
CDC42BPA-207ENST00000441725 ZNF467Q7Z7K2 595 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPA-207ENST00000441725 ARHGEF1Q92888 912 aaKnown RBP7.79□□□□□ -1.16
CDC42BPA-207ENST00000441725 SLC24A3Q9HC58 644 aa7.78□□□□□ -1.16
CDC42BPA-207ENST00000441725 PCDHB13Q9Y5F0 798 aa7.78□□□□□ -1.16
CDC42BPA-207ENST00000441725 SEMA3EO15041 775 aa7.78□□□□□ -1.16
CDC42BPA-207ENST00000441725 PDAP1Q13442 181 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-207ENST00000441725 DCBLD2Q96PD2 775 aa7.78□□□□□ -1.16
CDC42BPA-207ENST00000441725 POTEIP0CG38 1075 aa7.77□□□□□ -1.17
CDC42BPA-207ENST00000441725 PCDHB8Q9UN66 801 aa7.77□□□□□ -1.17
CDC42BPA-207ENST00000441725 PPP1R37O75864 691 aa7.76□□□□□ -1.17
CDC42BPA-207ENST00000441725 E2F4Q16254 413 aa7.76□□□□□ -1.17
CDC42BPA-207ENST00000441725 IFNL1Q8IU54 200 aa7.76□□□□□ -1.17
CDC42BPA-207ENST00000441725 TESPA1A2RU30 521 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPA-207ENST00000441725 SUPT5HO00267 1087 aaKnown RBP7.75□□□□□ -1.17
CDC42BPA-207ENST00000441725 TRPC6Q9Y210 931 aa7.74□□□□□ -1.17
CDC42BPA-207ENST00000441725 TIE1P35590 1138 aa7.72□□□□□ -1.17
CDC42BPA-207ENST00000441725 PSEN1P49768 467 aa7.72□□□□□ -1.17
CDC42BPA-207ENST00000441725 ASTLQ6HA08 431 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-207ENST00000441725 BMP2KQ9NSY1 1161 aaPredicted RBP7.71□□□□□ -1.17
CDC42BPA-207ENST00000441725 ATMINO43313 823 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-207ENST00000441725 ZMYND10O75800 440 aa7.7□□□□□ -1.18
CDC42BPA-207ENST00000441725 FBXO22Q8NEZ5 403 aa7.7□□□□□ -1.18
CDC42BPA-207ENST00000441725 TTLL13PA6NNM8 815 aa7.68□□□□□ -1.18
CDC42BPA-207ENST00000441725 ATN1P54259 1190 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-207ENST00000441725 EFCAB3Q8N7B9 438 aa7.67□□□□□ -1.18
CDC42BPA-207ENST00000441725 NCKAP5LQ9HCH0 1330 aa7.67□□□□□ -1.18
CDC42BPA-207ENST00000441725 PELP1Q8IZL8 1130 aaKnown RBP7.67□□□□□ -1.18
CDC42BPA-207ENST00000441725 PHF8Q9UPP1 1060 aa7.67□□□□□ -1.18
CDC42BPA-207ENST00000441725 TMEM106CQ9BVX2 250 aa7.66□□□□□ -1.18
CDC42BPA-207ENST00000441725 NLRP6P59044 892 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms