RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 DCAF8Q5TAQ9 597 aa15.25■□□□□ 0.03
LINC00354-202ENST00000440860 CLCN6P51797 869 aa15.24■□□□□ 0.03
LINC00354-202ENST00000440860 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
LINC00354-202ENST00000440860 FAM212AQ96EL1 285 aa15.21■□□□□ 0.03
LINC00354-202ENST00000440860 GALR2O43603 387 aaPredicted RBP15.18■□□□□ 0.02
LINC00354-202ENST00000440860 SPOCK2Q92563 424 aa15.17■□□□□ 0.02
LINC00354-202ENST00000440860 KIF12Q96FN5 646 aa15.13■□□□□ 0.01
LINC00354-202ENST00000440860 DCBLD2Q96PD2 775 aa15.12■□□□□ 0.01
LINC00354-202ENST00000440860 MAP3K13O43283 966 aa15.1■□□□□ 0.01
LINC00354-202ENST00000440860 MS4A3Q96HJ5 214 aa15.1■□□□□ 0.01
LINC00354-202ENST00000440860 GSE1Q14687 1217 aa15.08■□□□□ 0
LINC00354-202ENST00000440860 CIZ1Q9ULV3 898 aaPredicted RBP15.07■□□□□ 0
LINC00354-202ENST00000440860 PYGBP11216 843 aa15.06■□□□□ 0
LINC00354-202ENST00000440860 POTEIP0CG38 1075 aa15.04■□□□□ -0
LINC00354-202ENST00000440860 PCDHB13Q9Y5F0 798 aa15.01□□□□□ -0.01
LINC00354-202ENST00000440860 TRPC6Q9Y210 931 aa14.95□□□□□ -0.02
LINC00354-202ENST00000440860 SGIP1Q9BQI5 828 aa14.94□□□□□ -0.02
LINC00354-202ENST00000440860 IFNL1Q8IU54 200 aa14.93□□□□□ -0.02
LINC00354-202ENST00000440860 PCDHB8Q9UN66 801 aa14.88□□□□□ -0.03
LINC00354-202ENST00000440860 ATMINO43313 823 aaPredicted RBP14.87□□□□□ -0.03
LINC00354-202ENST00000440860 CHRM1P11229 460 aaPredicted RBP14.86□□□□□ -0.03
LINC00354-202ENST00000440860 ASTLQ6HA08 431 aaPredicted RBP14.85□□□□□ -0.03
LINC00354-202ENST00000440860 PELP1Q8IZL8 1130 aaKnown RBP14.85□□□□□ -0.03
LINC00354-202ENST00000440860 BMP2KQ9NSY1 1161 aaPredicted RBP14.85□□□□□ -0.03
LINC00354-202ENST00000440860 TIE1P35590 1138 aa14.83□□□□□ -0.04
LINC00354-202ENST00000440860 ATN1P54259 1190 aaPredicted RBP14.83□□□□□ -0.04
LINC00354-202ENST00000440860 TTLL13PA6NNM8 815 aa14.79□□□□□ -0.04
LINC00354-202ENST00000440860 ZNF467Q7Z7K2 595 aaPredicted RBP14.79□□□□□ -0.04
LINC00354-202ENST00000440860 TMEM106CQ9BVX2 250 aa14.78□□□□□ -0.04
LINC00354-202ENST00000440860 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
LINC00354-202ENST00000440860 SLC39A7Q92504 469 aa14.72□□□□□ -0.05
LINC00354-202ENST00000440860 LHX8Q68G74 356 aa14.71□□□□□ -0.05
LINC00354-202ENST00000440860 TRIM35Q9UPQ4 493 aa14.71□□□□□ -0.05
LINC00354-202ENST00000440860 C7P10643 843 aa14.69□□□□□ -0.06
LINC00354-202ENST00000440860 METRNQ9UJH8 293 aa14.69□□□□□ -0.06
LINC00354-202ENST00000440860 PSEN1P49768 467 aa14.68□□□□□ -0.06
LINC00354-202ENST00000440860 ECM2O94769 699 aaPredicted RBP14.65□□□□□ -0.06
LINC00354-202ENST00000440860 PDAP1Q13442 181 aaKnown RBP14.63□□□□□ -0.07
LINC00354-202ENST00000440860 PKD2Q13563 968 aa14.62□□□□□ -0.07
LINC00354-202ENST00000440860 SEC24BO95487 1268 aa14.6□□□□□ -0.07
LINC00354-202ENST00000440860 RIOK3O14730 519 aaKnown RBP14.59□□□□□ -0.07
LINC00354-202ENST00000440860 POTEB2H3BUK9 544 aa14.58□□□□□ -0.08
LINC00354-202ENST00000440860 RNF25Q96BH1 459 aaPredicted RBP14.58□□□□□ -0.08
LINC00354-202ENST00000440860 GOLGA2Q08379 1002 aa14.57□□□□□ -0.08
LINC00354-202ENST00000440860 POTEFA5A3E0 1075 aa14.54□□□□□ -0.08
LINC00354-202ENST00000440860 IER5LQ5T953 404 aa14.54□□□□□ -0.08
LINC00354-202ENST00000440860 COLQQ9Y215 455 aaPredicted RBP14.54□□□□□ -0.08
LINC00354-202ENST00000440860 MKRN3Q13064 507 aaKnown RBP14.52□□□□□ -0.09
LINC00354-202ENST00000440860 CABP2Q9NPB3 220 aa14.51□□□□□ -0.09
LINC00354-202ENST00000440860 VGFO15240 615 aaPredicted RBP14.5□□□□□ -0.09
LINC00354-202ENST00000440860 RGL2O15211 777 aa14.49□□□□□ -0.09
LINC00354-202ENST00000440860 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.48□□□□□ -0.09
LINC00354-202ENST00000440860 PLCG2P16885 1265 aa14.48□□□□□ -0.09
LINC00354-202ENST00000440860 ZFP91Q96JP5 570 aaPredicted RBP14.48□□□□□ -0.09
LINC00354-202ENST00000440860 IRX5P78411 483 aaPredicted RBP14.46□□□□□ -0.09
LINC00354-202ENST00000440860 OCEL1Q9H607 264 aa14.45□□□□□ -0.1
LINC00354-202ENST00000440860 TAOK2Q9UL54 1235 aa14.45□□□□□ -0.1
LINC00354-202ENST00000440860 POTEJP0CG39 1038 aa14.44□□□□□ -0.1
LINC00354-202ENST00000440860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.42□□□□□ -0.1
LINC00354-202ENST00000440860 OTUD5Q96G74 571 aa14.41□□□□□ -0.1
LINC00354-202ENST00000440860 EFCAB3Q8N7B9 438 aa14.39□□□□□ -0.11
LINC00354-202ENST00000440860 BCL11BQ9C0K0 894 aaPredicted RBP14.37□□□□□ -0.11
LINC00354-202ENST00000440860 STK24Q9Y6E0 443 aa14.37□□□□□ -0.11
LINC00354-202ENST00000440860 STK25O00506 426 aa14.36□□□□□ -0.11
LINC00354-202ENST00000440860 MAMSTRQ6ZN01 415 aa14.35□□□□□ -0.11
LINC00354-202ENST00000440860 SCUBE2Q9NQ36 999 aa14.34□□□□□ -0.11
LINC00354-202ENST00000440860 PDCD7Q8N8D1 485 aaKnown RBP14.31□□□□□ -0.12
LINC00354-202ENST00000440860 DPY19L2Q6NUT2 758 aa14.29□□□□□ -0.12
LINC00354-202ENST00000440860 SOX12O15370 315 aa14.26□□□□□ -0.13
LINC00354-202ENST00000440860 ILDR1Q86SU0 546 aaPredicted RBP14.25□□□□□ -0.13
LINC00354-202ENST00000440860 L3MBTL3Q96JM7 780 aaPredicted RBP14.25□□□□□ -0.13
LINC00354-202ENST00000440860 PHF8Q9UPP1 1060 aa14.23□□□□□ -0.13
LINC00354-202ENST00000440860 DCAF8L2P0C7V8 631 aa14.22□□□□□ -0.13
LINC00354-202ENST00000440860 CHGAP10645 457 aaKnown RBP14.21□□□□□ -0.13
LINC00354-202ENST00000440860 G3V3G9 751 aa14.19□□□□□ -0.14
LINC00354-202ENST00000440860 SLAIN1Q8ND83 568 aa14.17□□□□□ -0.14
LINC00354-202ENST00000440860 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.17□□□□□ -0.14
LINC00354-202ENST00000440860 NLRP6P59044 892 aa14.16□□□□□ -0.14
LINC00354-202ENST00000440860 BOLA1Q9Y3E2 137 aa14.15□□□□□ -0.14
LINC00354-202ENST00000440860 C3orf67Q6ZVT6 689 aa14.14□□□□□ -0.15
LINC00354-202ENST00000440860 MS4A4AQ96JQ5 239 aa14.14□□□□□ -0.15
LINC00354-202ENST00000440860 AMER1Q5JTC6 1135 aaPredicted RBP14.13□□□□□ -0.15
LINC00354-202ENST00000440860 MFRPQ9BY79 579 aa14.13□□□□□ -0.15
LINC00354-202ENST00000440860 HS6ST3Q8IZP7 471 aa14.12□□□□□ -0.15
LINC00354-202ENST00000440860 RTN4Q9NQC3 1192 aaKnown RBP14.11□□□□□ -0.15
LINC00354-202ENST00000440860 FBXO22Q8NEZ5 403 aa14.09□□□□□ -0.15
LINC00354-202ENST00000440860 FAM163AQ96GL9 167 aaPredicted RBP14.05□□□□□ -0.16
LINC00354-202ENST00000440860 MICALL2Q8IY33 904 aa14.02□□□□□ -0.17
LINC00354-202ENST00000440860 TMEM121BQ9BXQ6 578 aaPredicted RBP14.02□□□□□ -0.17
LINC00354-202ENST00000440860 PPP1R37O75864 691 aa13.96□□□□□ -0.17
LINC00354-202ENST00000440860 NKX1-1Q15270 411 aaPredicted RBP13.96□□□□□ -0.17
LINC00354-202ENST00000440860 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
LINC00354-202ENST00000440860 SNPHO15079 494 aa13.9□□□□□ -0.18
LINC00354-202ENST00000440860 TMEM92Q6UXU6 159 aa13.89□□□□□ -0.19
LINC00354-202ENST00000440860 RYDENQ9NUL5 291 aaKnown RBP13.85□□□□□ -0.19
LINC00354-202ENST00000440860 ST18O60284 1047 aa13.84□□□□□ -0.19
LINC00354-202ENST00000440860 LCE2DQ5TA82 110 aaPredicted RBP13.84□□□□□ -0.19
LINC00354-202ENST00000440860 POTEMA6NI47 508 aa13.81□□□□□ -0.2
LINC00354-202ENST00000440860 GTPBP6O43824 516 aaPredicted RBP13.81□□□□□ -0.2
LINC00354-202ENST00000440860 POTEGQ6S5H5 508 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms