RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 GALR2O43603 387 aaPredicted RBP13.56□□□□□ -0.24
CHD6-204ENST00000440647 TSPYL2Q9H2G4 693 aaPredicted RBP13.55□□□□□ -0.24
CHD6-204ENST00000440647 CCDC61Q9Y6R9 512 aa13.45□□□□□ -0.26
CHD6-204ENST00000440647 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
CHD6-204ENST00000440647 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
CHD6-204ENST00000440647 MS4A3Q96HJ5 214 aa13.41□□□□□ -0.26
CHD6-204ENST00000440647 RASEFQ8IZ41 740 aa13.4□□□□□ -0.26
CHD6-204ENST00000440647 KIF12Q96FN5 646 aa13.39□□□□□ -0.27
CHD6-204ENST00000440647 NUBP1P53384 320 aa13.38□□□□□ -0.27
CHD6-204ENST00000440647 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
CHD6-204ENST00000440647 FAM212AQ96EL1 285 aa13.33□□□□□ -0.28
CHD6-204ENST00000440647 SGIP1Q9BQI5 828 aa13.31□□□□□ -0.28
CHD6-204ENST00000440647 MAP3K13O43283 966 aa13.3□□□□□ -0.28
CHD6-204ENST00000440647 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
CHD6-204ENST00000440647 SLC39A7Q92504 469 aa13.3□□□□□ -0.28
CHD6-204ENST00000440647 SPOCK2Q92563 424 aa13.3□□□□□ -0.28
CHD6-204ENST00000440647 C7P10643 843 aa13.29□□□□□ -0.28
CHD6-204ENST00000440647 PELP1Q8IZL8 1130 aaKnown RBP13.25□□□□□ -0.29
CHD6-204ENST00000440647 TIE1P35590 1138 aa13.24□□□□□ -0.29
CHD6-204ENST00000440647 DCAF8Q5TAQ9 597 aa13.24□□□□□ -0.29
CHD6-204ENST00000440647 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
CHD6-204ENST00000440647 PCDHB13Q9Y5F0 798 aa13.22□□□□□ -0.29
CHD6-204ENST00000440647 ATN1P54259 1190 aaPredicted RBP13.19□□□□□ -0.3
CHD6-204ENST00000440647 GSE1Q14687 1217 aa13.19□□□□□ -0.3
CHD6-204ENST00000440647 BMP2KQ9NSY1 1161 aaPredicted RBP13.19□□□□□ -0.3
CHD6-204ENST00000440647 CCDC180Q9P1Z9 1646 aa13.17□□□□□ -0.3
CHD6-204ENST00000440647 ABCC9O60706 1549 aa13.14□□□□□ -0.31
CHD6-204ENST00000440647 MAMSTRQ6ZN01 415 aa13.14□□□□□ -0.31
CHD6-204ENST00000440647 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
CHD6-204ENST00000440647 OTUD5Q96G74 571 aa13.12□□□□□ -0.31
CHD6-204ENST00000440647 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
CHD6-204ENST00000440647 TRPC6Q9Y210 931 aa13.12□□□□□ -0.31
CHD6-204ENST00000440647 TTLL13PA6NNM8 815 aa13.11□□□□□ -0.31
CHD6-204ENST00000440647 IFNL1Q8IU54 200 aa13.1□□□□□ -0.31
CHD6-204ENST00000440647 SEC24BO95487 1268 aa13.08□□□□□ -0.32
CHD6-204ENST00000440647 PYGBP11216 843 aa13.07□□□□□ -0.32
CHD6-204ENST00000440647 IER5LQ5T953 404 aa13.06□□□□□ -0.32
CHD6-204ENST00000440647 CHRM1P11229 460 aaPredicted RBP13.05□□□□□ -0.32
CHD6-204ENST00000440647 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
CHD6-204ENST00000440647 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
CHD6-204ENST00000440647 SCUBE2Q9NQ36 999 aa13.03□□□□□ -0.32
CHD6-204ENST00000440647 TRIM41Q8WV44 630 aa13□□□□□ -0.33
CHD6-204ENST00000440647 ZNF467Q7Z7K2 595 aaPredicted RBP12.98□□□□□ -0.33
CHD6-204ENST00000440647 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
CHD6-204ENST00000440647 POTEJP0CG39 1038 aa12.94□□□□□ -0.34
CHD6-204ENST00000440647 PCDHB8Q9UN66 801 aa12.94□□□□□ -0.34
CHD6-204ENST00000440647 PLCG2P16885 1265 aa12.92□□□□□ -0.34
CHD6-204ENST00000440647 COLQQ9Y215 455 aaPredicted RBP12.92□□□□□ -0.34
CHD6-204ENST00000440647 PKD2Q13563 968 aa12.88□□□□□ -0.35
CHD6-204ENST00000440647 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
CHD6-204ENST00000440647 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
CHD6-204ENST00000440647 ECM2O94769 699 aaPredicted RBP12.84□□□□□ -0.35
CHD6-204ENST00000440647 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
CHD6-204ENST00000440647 MKRN3Q13064 507 aaKnown RBP12.81□□□□□ -0.36
CHD6-204ENST00000440647 PSEN1P49768 467 aa12.8□□□□□ -0.36
CHD6-204ENST00000440647 PDAP1Q13442 181 aaKnown RBP12.79□□□□□ -0.36
CHD6-204ENST00000440647 RIOK3O14730 519 aaKnown RBP12.78□□□□□ -0.36
CHD6-204ENST00000440647 RNF25Q96BH1 459 aaPredicted RBP12.78□□□□□ -0.36
CHD6-204ENST00000440647 FAM163AQ96GL9 167 aaPredicted RBP12.77□□□□□ -0.37
CHD6-204ENST00000440647 POTEMA6NI47 508 aa12.76□□□□□ -0.37
CHD6-204ENST00000440647 SLAIN1Q8ND83 568 aa12.73□□□□□ -0.37
CHD6-204ENST00000440647 POTEGQ6S5H5 508 aa12.72□□□□□ -0.37
CHD6-204ENST00000440647 RGL2O15211 777 aa12.71□□□□□ -0.37
CHD6-204ENST00000440647 VGFO15240 615 aaPredicted RBP12.71□□□□□ -0.37
CHD6-204ENST00000440647 L3MBTL3Q96JM7 780 aaPredicted RBP12.7□□□□□ -0.38
CHD6-204ENST00000440647 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
CHD6-204ENST00000440647 TAOK2Q9UL54 1235 aa12.7□□□□□ -0.38
CHD6-204ENST00000440647 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.69□□□□□ -0.386e-11■■□□□ 12.9
CHD6-204ENST00000440647 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
CHD6-204ENST00000440647 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
CHD6-204ENST00000440647 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
CHD6-204ENST00000440647 CABP2Q9NPB3 220 aa12.63□□□□□ -0.39
CHD6-204ENST00000440647 SNPHO15079 494 aa12.62□□□□□ -0.39
CHD6-204ENST00000440647 AMER1Q5JTC6 1135 aaPredicted RBP12.62□□□□□ -0.39
CHD6-204ENST00000440647 PDCD7Q8N8D1 485 aaKnown RBP12.62□□□□□ -0.39
CHD6-204ENST00000440647 C3orf67Q6ZVT6 689 aa12.61□□□□□ -0.39
CHD6-204ENST00000440647 G3V3G9 751 aa12.59□□□□□ -0.39
CHD6-204ENST00000440647 PLSCR2Q9NRY7 297 aa12.59□□□□□ -0.39
CHD6-204ENST00000440647 LCE2DQ5TA82 110 aaPredicted RBP12.56□□□□□ -0.4
CHD6-204ENST00000440647 ILDR1Q86SU0 546 aaPredicted RBP12.56□□□□□ -0.4
CHD6-204ENST00000440647 STK25O00506 426 aa12.55□□□□□ -0.4
CHD6-204ENST00000440647 BCL11BQ9C0K0 894 aaPredicted RBP12.55□□□□□ -0.4
CHD6-204ENST00000440647 RTN4Q9NQC3 1192 aaKnown RBP12.54□□□□□ -0.4
CHD6-204ENST00000440647 STK24Q9Y6E0 443 aa12.54□□□□□ -0.4
CHD6-204ENST00000440647 RB1CC1Q8TDY2 1594 aa12.53□□□□□ -0.4
CHD6-204ENST00000440647 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
CHD6-204ENST00000440647 ST18O60284 1047 aa12.5□□□□□ -0.41
CHD6-204ENST00000440647 TMEM121BQ9BXQ6 578 aaPredicted RBP12.49□□□□□ -0.41
CHD6-204ENST00000440647 BOLA1Q9Y3E2 137 aa12.49□□□□□ -0.41
CHD6-204ENST00000440647 SOX12O15370 315 aa12.48□□□□□ -0.41
CHD6-204ENST00000440647 DPY19L2Q6NUT2 758 aa12.46□□□□□ -0.41
CHD6-204ENST00000440647 CHGAP10645 457 aaKnown RBP12.45□□□□□ -0.42
CHD6-204ENST00000440647 HS6ST3Q8IZP7 471 aa12.45□□□□□ -0.42
CHD6-204ENST00000440647 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
CHD6-204ENST00000440647 NACADO15069 1562 aa12.42□□□□□ -0.42
CHD6-204ENST00000440647 PHF8Q9UPP1 1060 aa12.4□□□□□ -0.42
CHD6-204ENST00000440647 CDAN1Q8IWY9 1227 aa12.39□□□□□ -0.43
CHD6-204ENST00000440647 NLRP6P59044 892 aa12.38□□□□□ -0.43
CHD6-204ENST00000440647 MFRPQ9BY79 579 aa12.36□□□□□ -0.43
CHD6-204ENST00000440647 DNAJC5Q9H3Z4 198 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms