RNA–Protein interactions for RNA: ENST00000438352.1

LINC00448-201, long intergenic non-protein coding RNA 448, humanhuman

TSL 3 BASIC

Gene LINC00448, Length 402 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00448-201ENST00000438352 CSRNP3Q8WYN3 585 aa9.14□□□□□ -0.95
LINC00448-201ENST00000438352 CDAN1Q8IWY9 1227 aa9.13□□□□□ -0.95
LINC00448-201ENST00000438352 PHF12Q96QT6 1004 aa9.13□□□□□ -0.95
LINC00448-201ENST00000438352 POTEJP0CG39 1038 aa9.12□□□□□ -0.95
LINC00448-201ENST00000438352 CREBZFQ9NS37 354 aa9.1□□□□□ -0.95
LINC00448-201ENST00000438352 ATMINO43313 823 aaPredicted RBP9.08□□□□□ -0.96
LINC00448-201ENST00000438352 STAG3Q9UJ98 1225 aa9.08□□□□□ -0.96
LINC00448-201ENST00000438352 NPM1P06748 294 aaKnown RBP eCLIP9.05□□□□□ -0.96
LINC00448-201ENST00000438352 MS4A3Q96HJ5 214 aa9.01□□□□□ -0.97
LINC00448-201ENST00000438352 MMRN1Q13201 1228 aa8.97□□□□□ -0.97
LINC00448-201ENST00000438352 ATN1P54259 1190 aaPredicted RBP8.93□□□□□ -0.98
LINC00448-201ENST00000438352 SPNS2Q8IVW8 549 aa8.9□□□□□ -0.98
LINC00448-201ENST00000438352 SEC24BO95487 1268 aa8.86□□□□□ -0.99
LINC00448-201ENST00000438352 POTEFA5A3E0 1075 aa8.85□□□□□ -0.99
LINC00448-201ENST00000438352 ST18O60284 1047 aa8.85□□□□□ -0.99
LINC00448-201ENST00000438352 MNX1P50219 401 aaPredicted RBP8.83□□□□□ -1
LINC00448-201ENST00000438352 TMEM121BQ9BXQ6 578 aaPredicted RBP8.82□□□□□ -1
LINC00448-201ENST00000438352 BMP2KQ9NSY1 1161 aaPredicted RBP8.82□□□□□ -1
LINC00448-201ENST00000438352 TIE1P35590 1138 aa8.8□□□□□ -1
LINC00448-201ENST00000438352 SLAIN1Q8ND83 568 aa8.8□□□□□ -1
LINC00448-201ENST00000438352 TSPYL2Q9H2G4 693 aaPredicted RBP8.76□□□□□ -1.01
LINC00448-201ENST00000438352 IER5LQ5T953 404 aa8.75□□□□□ -1.01
LINC00448-201ENST00000438352 KIF12Q96FN5 646 aa8.75□□□□□ -1.01
LINC00448-201ENST00000438352 COLQQ9Y215 455 aaPredicted RBP8.75□□□□□ -1.01
LINC00448-201ENST00000438352 CCDC61Q9Y6R9 512 aa8.75□□□□□ -1.01
LINC00448-201ENST00000438352 SPDYE4A6NLX3 237 aa8.72□□□□□ -1.01
LINC00448-201ENST00000438352 SNPHO15079 494 aa8.72□□□□□ -1.01
LINC00448-201ENST00000438352 TTLL13PA6NNM8 815 aa8.69□□□□□ -1.02
LINC00448-201ENST00000438352 TRPC6Q9Y210 931 aa8.68□□□□□ -1.02
LINC00448-201ENST00000438352 TRIM35Q9UPQ4 493 aa8.65□□□□□ -1.02
LINC00448-201ENST00000438352 MAP3K13O43283 966 aa8.64□□□□□ -1.03
LINC00448-201ENST00000438352 PLCG2P16885 1265 aa8.61□□□□□ -1.03
LINC00448-201ENST00000438352 MARVELD3Q96A59 401 aa8.61□□□□□ -1.03
LINC00448-201ENST00000438352 SGIP1Q9BQI5 828 aa8.57□□□□□ -1.04
LINC00448-201ENST00000438352 EMP3P54852 163 aa8.56□□□□□ -1.04
LINC00448-201ENST00000438352 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.55□□□□□ -1.04
LINC00448-201ENST00000438352 PLEKHG5O94827 1062 aa8.53□□□□□ -1.04
LINC00448-201ENST00000438352 KRTAP3-3Q9BYR6 98 aa8.52□□□□□ -1.05
LINC00448-201ENST00000438352 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.05
LINC00448-201ENST00000438352 PCDHB13Q9Y5F0 798 aa8.51□□□□□ -1.05
LINC00448-201ENST00000438352 HS3ST6Q96QI5 342 aa8.5□□□□□ -1.05
LINC00448-201ENST00000438352 IRX5P78411 483 aaPredicted RBP8.48□□□□□ -1.05
LINC00448-201ENST00000438352 FAM205CA6NFA0 338 aa8.46□□□□□ -1.06
LINC00448-201ENST00000438352 TMEM106CQ9BVX2 250 aa8.46□□□□□ -1.06
LINC00448-201ENST00000438352 OCEL1Q9H607 264 aa8.46□□□□□ -1.06
LINC00448-201ENST00000438352 RASEFQ8IZ41 740 aa8.44□□□□□ -1.06
LINC00448-201ENST00000438352 RNF166Q96A37 237 aaPredicted RBP8.44□□□□□ -1.06
LINC00448-201ENST00000438352 C3orf67Q6ZVT6 689 aa8.4□□□□□ -1.06
LINC00448-201ENST00000438352 FKBP8Q14318 412 aa8.39□□□□□ -1.07
LINC00448-201ENST00000438352 IFNL1Q8IU54 200 aa8.39□□□□□ -1.07
LINC00448-201ENST00000438352 POTEB3A0JP26 581 aa8.38□□□□□ -1.07
LINC00448-201ENST00000438352 POTEBQ6S5H4 581 aa8.38□□□□□ -1.07
LINC00448-201ENST00000438352 MIER1Q8N108 512 aa8.37□□□□□ -1.07
LINC00448-201ENST00000438352 PROM2Q8N271 834 aa8.36□□□□□ -1.07
LINC00448-201ENST00000438352 PLCD3Q8N3E9 789 aa8.33□□□□□ -1.08
LINC00448-201ENST00000438352 MYT1LQ9UL68 1186 aa8.33□□□□□ -1.08
LINC00448-201ENST00000438352 L3MBTL3Q96JM7 780 aaPredicted RBP8.32□□□□□ -1.08
LINC00448-201ENST00000438352 ZBTB47Q9UFB7 747 aaPredicted RBP8.29□□□□□ -1.08
LINC00448-201ENST00000438352 PTGER2P43116 358 aa8.28□□□□□ -1.08
LINC00448-201ENST00000438352 FAM212AQ96EL1 285 aa8.27□□□□□ -1.09
LINC00448-201ENST00000438352 ERBB3P21860 1342 aa8.25□□□□□ -1.09
LINC00448-201ENST00000438352 ZNF710Q8N1W2 664 aa8.22□□□□□ -1.09
LINC00448-201ENST00000438352 HOXB1P14653 301 aaPredicted RBP8.21□□□□□ -1.1
LINC00448-201ENST00000438352 GOLGA2Q08379 1002 aa8.21□□□□□ -1.1
LINC00448-201ENST00000438352 PDCD7Q8N8D1 485 aaKnown RBP8.21□□□□□ -1.1
LINC00448-201ENST00000438352 NUBP1P53384 320 aa8.19□□□□□ -1.1
LINC00448-201ENST00000438352 FBXO3Q9UK99 471 aa8.19□□□□□ -1.1
LINC00448-201ENST00000438352 MKRN3Q13064 507 aaKnown RBP8.18□□□□□ -1.1
LINC00448-201ENST00000438352 DOK7Q18PE1 504 aa8.16□□□□□ -1.1
LINC00448-201ENST00000438352 RIMBP2O15034 1052 aa8.15□□□□□ -1.1
LINC00448-201ENST00000438352 G3V3G9 751 aa8.14□□□□□ -1.11
LINC00448-201ENST00000438352 HOXB3P14651 431 aaPredicted RBP8.14□□□□□ -1.11
LINC00448-201ENST00000438352 DCAF8Q5TAQ9 597 aa8.14□□□□□ -1.11
LINC00448-201ENST00000438352 VARS2Q5ST30 1063 aaKnown RBP8.13□□□□□ -1.11
LINC00448-201ENST00000438352 KLHL34Q8N239 644 aa8.12□□□□□ -1.11
LINC00448-201ENST00000438352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.12□□□□□ -1.11
LINC00448-201ENST00000438352 ZNF687Q8N1G0 1237 aa8.11□□□□□ -1.11
LINC00448-201ENST00000438352 PLA2G2EQ9NZK7 142 aa8.11□□□□□ -1.11
LINC00448-201ENST00000438352 PYGBP11216 843 aa8.08□□□□□ -1.12
LINC00448-201ENST00000438352 PCDHB8Q9UN66 801 aa8.08□□□□□ -1.12
LINC00448-201ENST00000438352 VASPP50552 380 aaPredicted RBP8.05□□□□□ -1.12
LINC00448-201ENST00000438352 ZNF467Q7Z7K2 595 aaPredicted RBP8.05□□□□□ -1.12
LINC00448-201ENST00000438352 ZSWIM6Q9HCJ5 1215 aa8.04□□□□□ -1.12
LINC00448-201ENST00000438352 ANKRD13DQ6ZTN6 518 aa8.03□□□□□ -1.12
LINC00448-201ENST00000438352 BOLA1Q9Y3E2 137 aa8.03□□□□□ -1.12
LINC00448-201ENST00000438352 ILDR1Q86SU0 546 aaPredicted RBP8□□□□□ -1.13
LINC00448-201ENST00000438352 HCSTQ9UBK5 93 aa8□□□□□ -1.13
LINC00448-201ENST00000438352 LSM11P83369 360 aaKnown RBP eCLIP7.95□□□□□ -1.14
LINC00448-201ENST00000438352 GSE1Q14687 1217 aa7.95□□□□□ -1.14
LINC00448-201ENST00000438352 DPY19L2Q6NUT2 758 aa7.94□□□□□ -1.14
LINC00448-201ENST00000438352 CIZ1Q9ULV3 898 aaPredicted RBP7.94□□□□□ -1.14
LINC00448-201ENST00000438352 PSEN1P49768 467 aa7.93□□□□□ -1.14
LINC00448-201ENST00000438352 SPOCK2Q92563 424 aa7.91□□□□□ -1.14
LINC00448-201ENST00000438352 RGS20O76081 388 aa7.9□□□□□ -1.14
LINC00448-201ENST00000438352 GPR153Q6NV75 609 aa7.9□□□□□ -1.14
LINC00448-201ENST00000438352 IRX2Q9BZI1 471 aaPredicted RBP7.9□□□□□ -1.14
LINC00448-201ENST00000438352 PBX2P40425 430 aa7.88□□□□□ -1.15
LINC00448-201ENST00000438352 IFNLR1Q8IU57 520 aaPredicted RBP7.88□□□□□ -1.15
LINC00448-201ENST00000438352 ZNF316A6NFI3 1004 aaPredicted RBP7.85□□□□□ -1.15
LINC00448-201ENST00000438352 PDAP1Q13442 181 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms