RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 AMER1Q5JTC6 1135 aaPredicted RBP20.27■□□□□ 0.84
LINC01090-202ENST00000434418 RASEFQ8IZ41 740 aa20.25■□□□□ 0.83
LINC01090-202ENST00000434418 SCRIBQ14160 1630 aa20.19■□□□□ 0.82
LINC01090-202ENST00000434418 CIZ1Q9ULV3 898 aaPredicted RBP20.15■□□□□ 0.82
LINC01090-202ENST00000434418 PKD2Q13563 968 aa20.12■□□□□ 0.81
LINC01090-202ENST00000434418 POTEHQ6S545 545 aa20.12■□□□□ 0.81
LINC01090-202ENST00000434418 DCAF8Q5TAQ9 597 aa20.1■□□□□ 0.81
LINC01090-202ENST00000434418 FAM212AQ96EL1 285 aa20.1■□□□□ 0.81
LINC01090-202ENST00000434418 TSPYL2Q9H2G4 693 aaPredicted RBP20.1■□□□□ 0.81
LINC01090-202ENST00000434418 CD44P16070 742 aaKnown RBP20.03■□□□□ 0.8
LINC01090-202ENST00000434418 SHROOM4Q9ULL8 1493 aa20.03■□□□□ 0.8
LINC01090-202ENST00000434418 GSE1Q14687 1217 aa20.02■□□□□ 0.8
LINC01090-202ENST00000434418 C19orf67A6NJJ6 358 aa19.99■□□□□ 0.79
LINC01090-202ENST00000434418 HAX1O00165 279 aa19.94■□□□□ 0.78
LINC01090-202ENST00000434418 PAK3O75914 559 aaPredicted RBP19.93■□□□□ 0.78
LINC01090-202ENST00000434418 ECM2O94769 699 aaPredicted RBP19.93■□□□□ 0.78
LINC01090-202ENST00000434418 ZRANB1Q9UGI0 708 aa19.93■□□□□ 0.78
LINC01090-202ENST00000434418 CCDC61Q9Y6R9 512 aa19.92■□□□□ 0.78
LINC01090-202ENST00000434418 PYGBP11216 843 aa19.89■□□□□ 0.77
LINC01090-202ENST00000434418 EVX2Q03828 476 aa19.89■□□□□ 0.77
LINC01090-202ENST00000434418 CC2D2AQ9P2K1 1620 aa19.89■□□□□ 0.77
LINC01090-202ENST00000434418 EIF4G1Q04637 1599 aaKnown RBP19.86■□□□□ 0.77
LINC01090-202ENST00000434418 PHF12Q96QT6 1004 aa19.82■□□□□ 0.76
LINC01090-202ENST00000434418 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
LINC01090-202ENST00000434418 CECR2Q9BXF3 1484 aa19.8■□□□□ 0.76
LINC01090-202ENST00000434418 RGL2O15211 777 aa19.8■□□□□ 0.76
LINC01090-202ENST00000434418 RNF25Q96BH1 459 aaPredicted RBP19.76■□□□□ 0.75
LINC01090-202ENST00000434418 ZNF579Q8NAF0 562 aaKnown RBP19.75■□□□□ 0.75
LINC01090-202ENST00000434418 CHRM1P11229 460 aaPredicted RBP19.73■□□□□ 0.75
LINC01090-202ENST00000434418 KIF12Q96FN5 646 aa19.7■□□□□ 0.74
LINC01090-202ENST00000434418 MAP3K13O43283 966 aa19.69■□□□□ 0.74
LINC01090-202ENST00000434418 PCDHB13Q9Y5F0 798 aa19.62■□□□□ 0.73
LINC01090-202ENST00000434418 PCDHB8Q9UN66 801 aa19.61■□□□□ 0.73
LINC01090-202ENST00000434418 RIOK3O14730 519 aaKnown RBP19.59■□□□□ 0.73
LINC01090-202ENST00000434418 IFNL1Q8IU54 200 aa19.57■□□□□ 0.72
LINC01090-202ENST00000434418 MS4A3Q96HJ5 214 aa19.57■□□□□ 0.72
LINC01090-202ENST00000434418 ZNF467Q7Z7K2 595 aaPredicted RBP19.53■□□□□ 0.72
LINC01090-202ENST00000434418 SGIP1Q9BQI5 828 aa19.51■□□□□ 0.71
LINC01090-202ENST00000434418 GALR2O43603 387 aaPredicted RBP19.5■□□□□ 0.71
LINC01090-202ENST00000434418 TRPC6Q9Y210 931 aa19.48■□□□□ 0.71
LINC01090-202ENST00000434418 VGFO15240 615 aaPredicted RBP19.45■□□□□ 0.7
LINC01090-202ENST00000434418 GABBR2O75899 941 aa19.42■□□□□ 0.7
LINC01090-202ENST00000434418 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.41■□□□□ 0.7
LINC01090-202ENST00000434418 ZFP91Q96JP5 570 aaPredicted RBP19.41■□□□□ 0.7
LINC01090-202ENST00000434418 SP7Q8TDD2 431 aaPredicted RBP19.4■□□□□ 0.7
LINC01090-202ENST00000434418 PDAP1Q13442 181 aaKnown RBP19.39■□□□□ 0.69
LINC01090-202ENST00000434418 CHGAP10645 457 aaKnown RBP19.38■□□□□ 0.69
LINC01090-202ENST00000434418 PSEN1P49768 467 aa19.37■□□□□ 0.69
LINC01090-202ENST00000434418 TAOK2Q9UL54 1235 aa19.34■□□□□ 0.69
LINC01090-202ENST00000434418 STK25O00506 426 aa19.33■□□□□ 0.68
LINC01090-202ENST00000434418 CLCN6P51797 869 aa19.32■□□□□ 0.68
LINC01090-202ENST00000434418 HS6ST3Q8IZP7 471 aa19.3■□□□□ 0.68
LINC01090-202ENST00000434418 BCL11BQ9C0K0 894 aaPredicted RBP19.3■□□□□ 0.68
LINC01090-202ENST00000434418 STK24Q9Y6E0 443 aa19.27■□□□□ 0.68
LINC01090-202ENST00000434418 TMEM106CQ9BVX2 250 aa19.26■□□□□ 0.67
LINC01090-202ENST00000434418 BMP2KQ9NSY1 1161 aaPredicted RBP19.25■□□□□ 0.67
LINC01090-202ENST00000434418 TIE1P35590 1138 aa19.23■□□□□ 0.67
LINC01090-202ENST00000434418 TTLL13PA6NNM8 815 aa19.22■□□□□ 0.67
LINC01090-202ENST00000434418 SMARCA4P51532 1647 aa19.22■□□□□ 0.67
LINC01090-202ENST00000434418 NCAPD3P42695 1498 aa19.2■□□□□ 0.66
LINC01090-202ENST00000434418 ATAD2BQ9ULI0 1458 aa19.18■□□□□ 0.66
LINC01090-202ENST00000434418 CABP2Q9NPB3 220 aa19.17■□□□□ 0.66
LINC01090-202ENST00000434418 ATMINO43313 823 aaPredicted RBP19.13■□□□□ 0.65
LINC01090-202ENST00000434418 ATN1P54259 1190 aaPredicted RBP19.13■□□□□ 0.65
LINC01090-202ENST00000434418 SMARCA2P51531 1590 aa19.13■□□□□ 0.65
LINC01090-202ENST00000434418 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
LINC01090-202ENST00000434418 NKX1-1Q15270 411 aaPredicted RBP19.11■□□□□ 0.65
LINC01090-202ENST00000434418 DCBLD2Q96PD2 775 aa19.11■□□□□ 0.65
LINC01090-202ENST00000434418 ASTLQ6HA08 431 aaPredicted RBP19.1■□□□□ 0.65
LINC01090-202ENST00000434418 BBXQ8WY36 941 aaPredicted RBP19.1■□□□□ 0.65
LINC01090-202ENST00000434418 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
LINC01090-202ENST00000434418 TRIM35Q9UPQ4 493 aa19.09■□□□□ 0.65
LINC01090-202ENST00000434418 POTEIP0CG38 1075 aa19.08■□□□□ 0.64
LINC01090-202ENST00000434418 EFCAB3Q8N7B9 438 aa19.08■□□□□ 0.64
LINC01090-202ENST00000434418 DNAJC5Q9H3Z4 198 aa19.06■□□□□ 0.64
LINC01090-202ENST00000434418 PELP1Q8IZL8 1130 aaKnown RBP19.03■□□□□ 0.64
LINC01090-202ENST00000434418 BAZ1BQ9UIG0 1483 aaKnown RBP19.03■□□□□ 0.64
LINC01090-202ENST00000434418 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
LINC01090-202ENST00000434418 GOLGA2Q08379 1002 aa19■□□□□ 0.63
LINC01090-202ENST00000434418 ERCC6Q03468 1493 aa19■□□□□ 0.63
LINC01090-202ENST00000434418 PEG3Q9GZU2 1588 aa18.99■□□□□ 0.63
LINC01090-202ENST00000434418 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.97■□□□□ 0.63
LINC01090-202ENST00000434418 NESP48681 1621 aa18.96■□□□□ 0.63
LINC01090-202ENST00000434418 MKRN3Q13064 507 aaKnown RBP18.95■□□□□ 0.62
LINC01090-202ENST00000434418 MFRPQ9BY79 579 aa18.95■□□□□ 0.62
LINC01090-202ENST00000434418 PHF8Q9UPP1 1060 aa18.93■□□□□ 0.62
LINC01090-202ENST00000434418 PAXIP1Q6ZW49 1069 aaPredicted RBP18.92■□□□□ 0.62
LINC01090-202ENST00000434418 CFAP44Q96MT7 982 aa18.9■□□□□ 0.62
LINC01090-202ENST00000434418 GTPBP6O43824 516 aaPredicted RBP18.89■□□□□ 0.61
LINC01090-202ENST00000434418 CUX2O14529 1486 aa18.89■□□□□ 0.61
LINC01090-202ENST00000434418 SOX12O15370 315 aa18.88■□□□□ 0.61
LINC01090-202ENST00000434418 PLCB2Q00722 1185 aa18.87■□□□□ 0.61
LINC01090-202ENST00000434418 FBXO22Q8NEZ5 403 aa18.86■□□□□ 0.61
LINC01090-202ENST00000434418 SPRYD3Q8NCJ5 442 aa18.85■□□□□ 0.61
LINC01090-202ENST00000434418 MS4A4AQ96JQ5 239 aa18.83■□□□□ 0.6
LINC01090-202ENST00000434418 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.83■□□□□ 0.6
LINC01090-202ENST00000434418 NLRP6P59044 892 aa18.82■□□□□ 0.6
LINC01090-202ENST00000434418 IER5LQ5T953 404 aa18.82■□□□□ 0.6
LINC01090-202ENST00000434418 IRX5P78411 483 aaPredicted RBP18.81■□□□□ 0.6
LINC01090-202ENST00000434418 WIZO95785 1651 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms