RNA–Protein interactions for RNA: ENST00000430033.1

LINC00392-201, long intergenic non-protein coding RNA 392, humanhuman

TSL 3 BASIC

Gene LINC00392, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00392-201ENST00000430033 MS4A3Q96HJ5 214 aa11.77□□□□□ -0.53
LINC00392-201ENST00000430033 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
LINC00392-201ENST00000430033 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
LINC00392-201ENST00000430033 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00392-201ENST00000430033 MNX1P50219 401 aaPredicted RBP11.75□□□□□ -0.53
LINC00392-201ENST00000430033 ATMINO43313 823 aaPredicted RBP11.74□□□□□ -0.53
LINC00392-201ENST00000430033 SLC39A7Q92504 469 aa11.74□□□□□ -0.53
LINC00392-201ENST00000430033 C7P10643 843 aa11.72□□□□□ -0.53
LINC00392-201ENST00000430033 LCE2DQ5TA82 110 aaPredicted RBP11.72□□□□□ -0.53
LINC00392-201ENST00000430033 MAMSTRQ6ZN01 415 aa11.69□□□□□ -0.54
LINC00392-201ENST00000430033 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
LINC00392-201ENST00000430033 ATN1P54259 1190 aaPredicted RBP11.62□□□□□ -0.55
LINC00392-201ENST00000430033 SCUBE2Q9NQ36 999 aa11.62□□□□□ -0.55
LINC00392-201ENST00000430033 FBXO3Q9UK99 471 aa11.62□□□□□ -0.55
LINC00392-201ENST00000430033 TSPYL2Q9H2G4 693 aaPredicted RBP11.59□□□□□ -0.55
LINC00392-201ENST00000430033 POTEFA5A3E0 1075 aa11.55□□□□□ -0.56
LINC00392-201ENST00000430033 CCDC61Q9Y6R9 512 aa11.53□□□□□ -0.56
LINC00392-201ENST00000430033 BMP2KQ9NSY1 1161 aaPredicted RBP11.51□□□□□ -0.57
LINC00392-201ENST00000430033 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
LINC00392-201ENST00000430033 KIF12Q96FN5 646 aa11.5□□□□□ -0.57
LINC00392-201ENST00000430033 MIER1Q8N108 512 aa11.48□□□□□ -0.57
LINC00392-201ENST00000430033 VASPP50552 380 aaPredicted RBP11.45□□□□□ -0.58
LINC00392-201ENST00000430033 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
LINC00392-201ENST00000430033 CDAN1Q8IWY9 1227 aa11.44□□□□□ -0.58
LINC00392-201ENST00000430033 PLCD3Q8N3E9 789 aa11.44□□□□□ -0.58
LINC00392-201ENST00000430033 TIE1P35590 1138 aa11.42□□□□□ -0.58
LINC00392-201ENST00000430033 COLQQ9Y215 455 aaPredicted RBP11.42□□□□□ -0.58
LINC00392-201ENST00000430033 MAP3K13O43283 966 aa11.41□□□□□ -0.58
LINC00392-201ENST00000430033 SEC24BO95487 1268 aa11.39□□□□□ -0.59
LINC00392-201ENST00000430033 TTLL13PA6NNM8 815 aa11.37□□□□□ -0.59
LINC00392-201ENST00000430033 ZBTB47Q9UFB7 747 aaPredicted RBP11.37□□□□□ -0.59
LINC00392-201ENST00000430033 RASEFQ8IZ41 740 aa11.33□□□□□ -0.6
LINC00392-201ENST00000430033 ST18O60284 1047 aa11.3□□□□□ -0.6
LINC00392-201ENST00000430033 TRIM35Q9UPQ4 493 aa11.3□□□□□ -0.6
LINC00392-201ENST00000430033 SLAIN1Q8ND83 568 aa11.29□□□□□ -0.6
LINC00392-201ENST00000430033 IFNLR1Q8IU57 520 aaPredicted RBP11.28□□□□□ -0.6
LINC00392-201ENST00000430033 IER5LQ5T953 404 aa11.27□□□□□ -0.61
LINC00392-201ENST00000430033 NUBP1P53384 320 aa11.25□□□□□ -0.61
LINC00392-201ENST00000430033 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
LINC00392-201ENST00000430033 PCDHB13Q9Y5F0 798 aa11.22□□□□□ -0.61
LINC00392-201ENST00000430033 MMRN1Q13201 1228 aa11.21□□□□□ -0.61
LINC00392-201ENST00000430033 SPOCK2Q92563 424 aa11.18□□□□□ -0.62
LINC00392-201ENST00000430033 SGIP1Q9BQI5 828 aa11.18□□□□□ -0.62
LINC00392-201ENST00000430033 SPNS2Q8IVW8 549 aa11.17□□□□□ -0.62
LINC00392-201ENST00000430033 PLCG2P16885 1265 aa11.16□□□□□ -0.62
LINC00392-201ENST00000430033 IFNL1Q8IU54 200 aa11.14□□□□□ -0.63
LINC00392-201ENST00000430033 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
LINC00392-201ENST00000430033 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
LINC00392-201ENST00000430033 TMEM121BQ9BXQ6 578 aaPredicted RBP11.1□□□□□ -0.63
LINC00392-201ENST00000430033 IRX5P78411 483 aaPredicted RBP11.09□□□□□ -0.63
LINC00392-201ENST00000430033 MARVELD3Q96A59 401 aa11.08□□□□□ -0.64
LINC00392-201ENST00000430033 GSE1Q14687 1217 aa11.07□□□□□ -0.64
LINC00392-201ENST00000430033 DCAF8Q5TAQ9 597 aa11.07□□□□□ -0.64
LINC00392-201ENST00000430033 SNPHO15079 494 aa11.02□□□□□ -0.65
LINC00392-201ENST00000430033 OCEL1Q9H607 264 aa11.01□□□□□ -0.65
LINC00392-201ENST00000430033 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.01□□□□□ -0.65
LINC00392-201ENST00000430033 CHRM1P11229 460 aaPredicted RBP10.98□□□□□ -0.65
LINC00392-201ENST00000430033 CIZ1Q9ULV3 898 aaPredicted RBP10.98□□□□□ -0.65
LINC00392-201ENST00000430033 RTN4Q9NQC3 1192 aaKnown RBP10.95□□□□□ -0.66
LINC00392-201ENST00000430033 PYGBP11216 843 aa10.94□□□□□ -0.66
LINC00392-201ENST00000430033 TRIM41Q8WV44 630 aa10.94□□□□□ -0.66
LINC00392-201ENST00000430033 EMP3P54852 163 aa10.93□□□□□ -0.66
LINC00392-201ENST00000430033 KRTAP3-3Q9BYR6 98 aa10.91□□□□□ -0.66
LINC00392-201ENST00000430033 KRTAP3-2Q9BYR7 98 aa10.91□□□□□ -0.66
LINC00392-201ENST00000430033 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
LINC00392-201ENST00000430033 AMER1Q5JTC6 1135 aaPredicted RBP10.9□□□□□ -0.66
LINC00392-201ENST00000430033 POTEBQ6S5H4 581 aa10.9□□□□□ -0.66
LINC00392-201ENST00000430033 PCDHB8Q9UN66 801 aa10.89□□□□□ -0.67
LINC00392-201ENST00000430033 PKD2Q13563 968 aa10.88□□□□□ -0.67
LINC00392-201ENST00000430033 HS3ST6Q96QI5 342 aa10.87□□□□□ -0.67
LINC00392-201ENST00000430033 FAM205CA6NFA0 338 aa10.86□□□□□ -0.67
LINC00392-201ENST00000430033 C3orf67Q6ZVT6 689 aa10.86□□□□□ -0.67
LINC00392-201ENST00000430033 PDCD7Q8N8D1 485 aaKnown RBP10.86□□□□□ -0.67
LINC00392-201ENST00000430033 ZNF467Q7Z7K2 595 aaPredicted RBP10.84□□□□□ -0.67
LINC00392-201ENST00000430033 ECM2O94769 699 aaPredicted RBP10.78□□□□□ -0.68
LINC00392-201ENST00000430033 L3MBTL3Q96JM7 780 aaPredicted RBP10.78□□□□□ -0.68
LINC00392-201ENST00000430033 RNF25Q96BH1 459 aaPredicted RBP10.76□□□□□ -0.69
LINC00392-201ENST00000430033 MKRN3Q13064 507 aaKnown RBP10.75□□□□□ -0.69
LINC00392-201ENST00000430033 RIOK3O14730 519 aaKnown RBP10.74□□□□□ -0.69
LINC00392-201ENST00000430033 GOLGA2Q08379 1002 aa10.74□□□□□ -0.69
LINC00392-201ENST00000430033 PDAP1Q13442 181 aaKnown RBP10.74□□□□□ -0.69
LINC00392-201ENST00000430033 PSEN1P49768 467 aa10.72□□□□□ -0.69
LINC00392-201ENST00000430033 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00392-201ENST00000430033 RGL2O15211 777 aa10.71□□□□□ -0.69
LINC00392-201ENST00000430033 VGFO15240 615 aaPredicted RBP10.68□□□□□ -0.7
LINC00392-201ENST00000430033 HOXB3P14651 431 aaPredicted RBP10.66□□□□□ -0.7
LINC00392-201ENST00000430033 TAOK2Q9UL54 1235 aa10.66□□□□□ -0.7
LINC00392-201ENST00000430033 DPY19L2Q6NUT2 758 aa10.65□□□□□ -0.7
LINC00392-201ENST00000430033 RNF166Q96A37 237 aaPredicted RBP10.64□□□□□ -0.71
LINC00392-201ENST00000430033 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.61□□□□□ -0.71
LINC00392-201ENST00000430033 ILDR1Q86SU0 546 aaPredicted RBP10.61□□□□□ -0.71
LINC00392-201ENST00000430033 ZFP91Q96JP5 570 aaPredicted RBP10.61□□□□□ -0.71
LINC00392-201ENST00000430033 ERBB3P21860 1342 aa10.6□□□□□ -0.71
LINC00392-201ENST00000430033 HOXB1P14653 301 aaPredicted RBP10.6□□□□□ -0.71
LINC00392-201ENST00000430033 ZNF710Q8N1W2 664 aa10.59□□□□□ -0.71
LINC00392-201ENST00000430033 DCAF8L2P0C7V8 631 aa10.58□□□□□ -0.72
LINC00392-201ENST00000430033 BOLA1Q9Y3E2 137 aa10.57□□□□□ -0.72
LINC00392-201ENST00000430033 G3V3G9 751 aa10.56□□□□□ -0.72
LINC00392-201ENST00000430033 CABP2Q9NPB3 220 aa10.56□□□□□ -0.72
LINC00392-201ENST00000430033 MYT1LQ9UL68 1186 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms