RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 CLCN6P51797 869 aa16.42■□□□□ 0.22
LINC01953-201ENST00000426870 DCAF8Q5TAQ9 597 aa16.42■□□□□ 0.22
LINC01953-201ENST00000426870 GSE1Q14687 1217 aa16.38■□□□□ 0.21
LINC01953-201ENST00000426870 CCDC61Q9Y6R9 512 aa16.34■□□□□ 0.21
LINC01953-201ENST00000426870 PHF12Q96QT6 1004 aa16.32■□□□□ 0.2
LINC01953-201ENST00000426870 CIZ1Q9ULV3 898 aaPredicted RBP16.32■□□□□ 0.2
LINC01953-201ENST00000426870 GABBR2O75899 941 aa16.3■□□□□ 0.2
LINC01953-201ENST00000426870 KIF12Q96FN5 646 aa16.2■□□□□ 0.18
LINC01953-201ENST00000426870 PYGBP11216 843 aa16.17■□□□□ 0.18
LINC01953-201ENST00000426870 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
LINC01953-201ENST00000426870 MAP3K13O43283 966 aa16.15■□□□□ 0.18
LINC01953-201ENST00000426870 SGIP1Q9BQI5 828 aa16.15■□□□□ 0.18
LINC01953-201ENST00000426870 PCDHB13Q9Y5F0 798 aa16.14■□□□□ 0.17
LINC01953-201ENST00000426870 GALR2O43603 387 aaPredicted RBP16.13■□□□□ 0.17
LINC01953-201ENST00000426870 MS4A3Q96HJ5 214 aa16.13■□□□□ 0.17
LINC01953-201ENST00000426870 DCBLD2Q96PD2 775 aa16.12■□□□□ 0.17
LINC01953-201ENST00000426870 CHRM1P11229 460 aaPredicted RBP16.09■□□□□ 0.17
LINC01953-201ENST00000426870 ZNF467Q7Z7K2 595 aaPredicted RBP16.04■□□□□ 0.16
LINC01953-201ENST00000426870 IFNL1Q8IU54 200 aa16■□□□□ 0.15
LINC01953-201ENST00000426870 ECM2O94769 699 aaPredicted RBP15.96■□□□□ 0.15
LINC01953-201ENST00000426870 PCDHB8Q9UN66 801 aa15.95■□□□□ 0.14
LINC01953-201ENST00000426870 TIE1P35590 1138 aa15.94■□□□□ 0.14
LINC01953-201ENST00000426870 PKD2Q13563 968 aa15.89■□□□□ 0.13
LINC01953-201ENST00000426870 ASTLQ6HA08 431 aaPredicted RBP15.87■□□□□ 0.13
LINC01953-201ENST00000426870 TAOK2Q9UL54 1235 aa15.87■□□□□ 0.13
LINC01953-201ENST00000426870 TRPC6Q9Y210 931 aa15.87■□□□□ 0.13
LINC01953-201ENST00000426870 ATMINO43313 823 aaPredicted RBP15.86■□□□□ 0.13
LINC01953-201ENST00000426870 POTEIP0CG38 1075 aa15.86■□□□□ 0.13
LINC01953-201ENST00000426870 TMEM106CQ9BVX2 250 aa15.86■□□□□ 0.13
LINC01953-201ENST00000426870 BMP2KQ9NSY1 1161 aaPredicted RBP15.86■□□□□ 0.13
LINC01953-201ENST00000426870 PDAP1Q13442 181 aaKnown RBP15.85■□□□□ 0.13
LINC01953-201ENST00000426870 RIOK3O14730 519 aaKnown RBP15.84■□□□□ 0.13
LINC01953-201ENST00000426870 TTLL13PA6NNM8 815 aa15.82■□□□□ 0.12
LINC01953-201ENST00000426870 PSEN1P49768 467 aa15.82■□□□□ 0.12
LINC01953-201ENST00000426870 ATN1P54259 1190 aaPredicted RBP15.8■□□□□ 0.12
LINC01953-201ENST00000426870 VGFO15240 615 aaPredicted RBP15.77■□□□□ 0.12
LINC01953-201ENST00000426870 GOLGA2Q08379 1002 aa15.77■□□□□ 0.12
LINC01953-201ENST00000426870 SLC39A7Q92504 469 aa15.77■□□□□ 0.12
LINC01953-201ENST00000426870 AMER1Q5JTC6 1135 aaPredicted RBP15.76■□□□□ 0.11
LINC01953-201ENST00000426870 TRIM35Q9UPQ4 493 aa15.76■□□□□ 0.11
LINC01953-201ENST00000426870 RNF25Q96BH1 459 aaPredicted RBP15.74■□□□□ 0.11
LINC01953-201ENST00000426870 C7P10643 843 aa15.72■□□□□ 0.11
LINC01953-201ENST00000426870 RGL2O15211 777 aa15.71■□□□□ 0.11
LINC01953-201ENST00000426870 PELP1Q8IZL8 1130 aaKnown RBP15.71■□□□□ 0.11
LINC01953-201ENST00000426870 METRNQ9UJH8 293 aa15.68■□□□□ 0.1
LINC01953-201ENST00000426870 MKRN3Q13064 507 aaKnown RBP15.67■□□□□ 0.1
LINC01953-201ENST00000426870 IER5LQ5T953 404 aa15.67■□□□□ 0.1
LINC01953-201ENST00000426870 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.65■□□□□ 0.1
LINC01953-201ENST00000426870 SEC24BO95487 1268 aa15.65■□□□□ 0.1
LINC01953-201ENST00000426870 ZFP91Q96JP5 570 aaPredicted RBP15.65■□□□□ 0.1
LINC01953-201ENST00000426870 CABP2Q9NPB3 220 aa15.63■□□□□ 0.09
LINC01953-201ENST00000426870 STK25O00506 426 aa15.59■□□□□ 0.09
LINC01953-201ENST00000426870 DCAF8L2P0C7V8 631 aa15.58■□□□□ 0.08
LINC01953-201ENST00000426870 PLCG2P16885 1265 aa15.57■□□□□ 0.08
LINC01953-201ENST00000426870 STK24Q9Y6E0 443 aa15.57■□□□□ 0.08
LINC01953-201ENST00000426870 BCL11BQ9C0K0 894 aaPredicted RBP15.56■□□□□ 0.08
LINC01953-201ENST00000426870 RTN4Q9NQC3 1192 aaKnown RBP15.56■□□□□ 0.08
LINC01953-201ENST00000426870 LHX8Q68G74 356 aa15.52■□□□□ 0.08
LINC01953-201ENST00000426870 OCEL1Q9H607 264 aa15.51■□□□□ 0.07
LINC01953-201ENST00000426870 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.5■□□□□ 0.07
LINC01953-201ENST00000426870 EFCAB3Q8N7B9 438 aa15.48■□□□□ 0.07
LINC01953-201ENST00000426870 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
LINC01953-201ENST00000426870 IRX5P78411 483 aaPredicted RBP15.47■□□□□ 0.07
LINC01953-201ENST00000426870 COLQQ9Y215 455 aaPredicted RBP15.46■□□□□ 0.07
LINC01953-201ENST00000426870 SOX12O15370 315 aa15.45■□□□□ 0.06
LINC01953-201ENST00000426870 HS6ST3Q8IZP7 471 aa15.43■□□□□ 0.06
LINC01953-201ENST00000426870 POTEFA5A3E0 1075 aa15.41■□□□□ 0.06
LINC01953-201ENST00000426870 MAMSTRQ6ZN01 415 aa15.39■□□□□ 0.05
LINC01953-201ENST00000426870 G3V3G9 751 aa15.37■□□□□ 0.05
LINC01953-201ENST00000426870 NLRP6P59044 892 aa15.36■□□□□ 0.05
LINC01953-201ENST00000426870 L3MBTL3Q96JM7 780 aaPredicted RBP15.36■□□□□ 0.05
LINC01953-201ENST00000426870 POTEB2H3BUK9 544 aa15.35■□□□□ 0.05
LINC01953-201ENST00000426870 SCUBE2Q9NQ36 999 aa15.35■□□□□ 0.05
LINC01953-201ENST00000426870 PDCD7Q8N8D1 485 aaKnown RBP15.34■□□□□ 0.05
LINC01953-201ENST00000426870 ILDR1Q86SU0 546 aaPredicted RBP15.32■□□□□ 0.04
LINC01953-201ENST00000426870 PHF8Q9UPP1 1060 aa15.32■□□□□ 0.04
LINC01953-201ENST00000426870 MFRPQ9BY79 579 aa15.25■□□□□ 0.03
LINC01953-201ENST00000426870 RYDENQ9NUL5 291 aaKnown RBP15.25■□□□□ 0.03
LINC01953-201ENST00000426870 DPY19L2Q6NUT2 758 aa15.24■□□□□ 0.03
LINC01953-201ENST00000426870 C3orf67Q6ZVT6 689 aa15.23■□□□□ 0.03
LINC01953-201ENST00000426870 DNAJC5Q9H3Z4 198 aa15.23■□□□□ 0.03
LINC01953-201ENST00000426870 BOLA1Q9Y3E2 137 aa15.23■□□□□ 0.03
LINC01953-201ENST00000426870 POTEJP0CG39 1038 aa15.22■□□□□ 0.03
LINC01953-201ENST00000426870 FBXO22Q8NEZ5 403 aa15.21■□□□□ 0.03
LINC01953-201ENST00000426870 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.21■□□□□ 0.03
LINC01953-201ENST00000426870 OTUD5Q96G74 571 aa15.2■□□□□ 0.02
LINC01953-201ENST00000426870 MS4A4AQ96JQ5 239 aa15.19■□□□□ 0.02
LINC01953-201ENST00000426870 BBXQ8WY36 941 aaPredicted RBP15.12■□□□□ 0.01
LINC01953-201ENST00000426870 NKX1-1Q15270 411 aaPredicted RBP15.11■□□□□ 0.01
LINC01953-201ENST00000426870 SLAIN1Q8ND83 568 aa15.11■□□□□ 0.01
LINC01953-201ENST00000426870 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
LINC01953-201ENST00000426870 MICALL2Q8IY33 904 aa15.1■□□□□ 0.01
LINC01953-201ENST00000426870 TMEM121BQ9BXQ6 578 aaPredicted RBP15.07■□□□□ 0
LINC01953-201ENST00000426870 PPP1R37O75864 691 aa15□□□□□ -0.01
LINC01953-201ENST00000426870 GTPBP6O43824 516 aaPredicted RBP14.99□□□□□ -0.01
LINC01953-201ENST00000426870 SNPHO15079 494 aa14.96□□□□□ -0.01
LINC01953-201ENST00000426870 SPRYD3Q8NCJ5 442 aa14.96□□□□□ -0.01
LINC01953-201ENST00000426870 TMC2Q8TDI7 906 aa14.9□□□□□ -0.02
LINC01953-201ENST00000426870 PAXIP1Q6ZW49 1069 aaPredicted RBP14.89□□□□□ -0.03
LINC01953-201ENST00000426870 CFAP44Q96MT7 982 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms