RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
NIF3L1-207ENST00000426253 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
NIF3L1-207ENST00000426253 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
NIF3L1-207ENST00000426253 ZNF692Q9BU19 519 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-207ENST00000426253 SLC24A1O60721 1099 aa11.84□□□□□ -0.51
NIF3L1-207ENST00000426253 CEP164Q9UPV0 1460 aa11.82□□□□□ -0.52
NIF3L1-207ENST00000426253 CADPSQ9ULU8 1353 aa11.8□□□□□ -0.52
NIF3L1-207ENST00000426253 CACNB1Q02641 598 aaPredicted RBP11.8□□□□□ -0.52
NIF3L1-207ENST00000426253 IFNLR1Q8IU57 520 aaPredicted RBP11.79□□□□□ -0.52
NIF3L1-207ENST00000426253 SSUH2Q9Y2M2 353 aa11.79□□□□□ -0.52
NIF3L1-207ENST00000426253 STAG3Q9UJ98 1225 aa11.75□□□□□ -0.53
NIF3L1-207ENST00000426253 FANCD2Q9BXW9 1451 aa11.71□□□□□ -0.53
NIF3L1-207ENST00000426253 PEG3Q9GZU2 1588 aa11.68□□□□□ -0.54
NIF3L1-207ENST00000426253 RSF1Q96T23 1441 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-207ENST00000426253 CHD1O14646 1710 aa11.66□□□□□ -0.54
NIF3L1-207ENST00000426253 ZNF608Q9ULD9 1512 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-207ENST00000426253 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.55
NIF3L1-207ENST00000426253 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
NIF3L1-207ENST00000426253 SPOCK2Q92563 424 aa11.59□□□□□ -0.55
NIF3L1-207ENST00000426253 IFT140Q96RY7 1462 aa11.58□□□□□ -0.56
NIF3L1-207ENST00000426253 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.56
NIF3L1-207ENST00000426253 PKD2Q13563 968 aa11.57□□□□□ -0.56
NIF3L1-207ENST00000426253 PLCD3Q8N3E9 789 aa11.57□□□□□ -0.56
NIF3L1-207ENST00000426253 KDM4FA0A1W2PPD8 638 aa11.55□□□□□ -0.56
NIF3L1-207ENST00000426253 MIER1Q8N108 512 aa11.55□□□□□ -0.56
NIF3L1-207ENST00000426253 MROH2BQ7Z745 1585 aa11.51□□□□□ -0.57
NIF3L1-207ENST00000426253 LMTK3Q96Q04 1460 aa11.5□□□□□ -0.57
NIF3L1-207ENST00000426253 PLEKHG5O94827 1062 aa11.48□□□□□ -0.57
NIF3L1-207ENST00000426253 FBXO41Q8TF61 875 aa11.48□□□□□ -0.57
NIF3L1-207ENST00000426253 CFTRP13569 1480 aa11.48□□□□□ -0.57
NIF3L1-207ENST00000426253 ERCC6L2Q5T890 1561 aa11.48□□□□□ -0.57
NIF3L1-207ENST00000426253 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-207ENST00000426253 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-207ENST00000426253 CLASP1Q7Z460 1538 aa11.45□□□□□ -0.58
NIF3L1-207ENST00000426253 AQRO60306 1485 aaKnown RBP eCLIP11.45□□□□□ -0.58
NIF3L1-207ENST00000426253 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
NIF3L1-207ENST00000426253 AKT1S1Q96B36 256 aa11.43□□□□□ -0.58
NIF3L1-207ENST00000426253 HECW2Q9P2P5 1572 aa11.42□□□□□ -0.58
NIF3L1-207ENST00000426253 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
NIF3L1-207ENST00000426253 KIF13AQ9H1H9 1805 aa11.4□□□□□ -0.58
NIF3L1-207ENST00000426253 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
NIF3L1-207ENST00000426253 PLCB2Q00722 1185 aa11.4□□□□□ -0.58
NIF3L1-207ENST00000426253 SOCS7O14512 581 aa11.39□□□□□ -0.59
NIF3L1-207ENST00000426253 SPDYE1Q8NFV5 336 aaPredicted RBP11.38□□□□□ -0.59
NIF3L1-207ENST00000426253 TOPBP1Q92547 1522 aa11.38□□□□□ -0.59
NIF3L1-207ENST00000426253 WIZO95785 1651 aa11.36□□□□□ -0.59
NIF3L1-207ENST00000426253 CHMP7Q8WUX9 453 aaPredicted RBP11.36□□□□□ -0.59
NIF3L1-207ENST00000426253 PRDM2Q13029 1718 aa11.34□□□□□ -0.59
NIF3L1-207ENST00000426253 KDM6BO15054 1643 aa11.34□□□□□ -0.59
NIF3L1-207ENST00000426253 TARBP1Q13395 1621 aaKnown RBP11.33□□□□□ -0.6
NIF3L1-207ENST00000426253 SNAPC4Q5SXM2 1469 aa11.32□□□□□ -0.6
NIF3L1-207ENST00000426253 ILDR2Q71H61 639 aa11.31□□□□□ -0.6
NIF3L1-207ENST00000426253 ADGRL1O94910 1474 aa11.3□□□□□ -0.6
NIF3L1-207ENST00000426253 REM2Q8IYK8 340 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-207ENST00000426253 CIZ1Q9ULV3 898 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-207ENST00000426253 ABCC8Q09428 1581 aa11.28□□□□□ -0.6
NIF3L1-207ENST00000426253 SYNJ2O15056 1496 aa11.28□□□□□ -0.6
NIF3L1-207ENST00000426253 FAM69CQ0P6D2 419 aa11.28□□□□□ -0.6
NIF3L1-207ENST00000426253 RGL2O15211 777 aa11.27□□□□□ -0.61
NIF3L1-207ENST00000426253 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
NIF3L1-207ENST00000426253 DNMBPQ6XZF7 1577 aa11.27□□□□□ -0.61
NIF3L1-207ENST00000426253 DISP3Q9P2K9 1392 aa11.27□□□□□ -0.61
NIF3L1-207ENST00000426253 BBXQ8WY36 941 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-207ENST00000426253 CLEC11AQ9Y240 323 aa11.26□□□□□ -0.61
NIF3L1-207ENST00000426253 TDRD9Q8NDG6 1382 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-207ENST00000426253 GSE1Q14687 1217 aa11.24□□□□□ -0.61
NIF3L1-207ENST00000426253 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-207ENST00000426253 MAGI1Q96QZ7 1491 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-207ENST00000426253 NUBP1P53384 320 aa11.22□□□□□ -0.61
NIF3L1-207ENST00000426253 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.61
NIF3L1-207ENST00000426253 CREBZFQ9NS37 354 aa11.21□□□□□ -0.61
NIF3L1-207ENST00000426253 POLA1P09884 1462 aaPredicted RBP11.2□□□□□ -0.62
NIF3L1-207ENST00000426253 ABCC10Q5T3U5 1492 aa11.2□□□□□ -0.62
NIF3L1-207ENST00000426253 RAD54L2Q9Y4B4 1467 aa11.2□□□□□ -0.62
NIF3L1-207ENST00000426253 TSPOAP1O95153 1857 aa11.2□□□□□ -0.62
NIF3L1-207ENST00000426253 HAP1P54257 671 aaPredicted RBP11.18□□□□□ -0.62
NIF3L1-207ENST00000426253 DIP2BQ9P265 1576 aa11.17□□□□□ -0.62
NIF3L1-207ENST00000426253 MNX1P50219 401 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-207ENST00000426253 TOP2AP11388 1531 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-207ENST00000426253 SOGA1O94964 1423 aa11.16□□□□□ -0.62
NIF3L1-207ENST00000426253 GRIN2BQ13224 1484 aa11.15□□□□□ -0.62
NIF3L1-207ENST00000426253 WDR97A6NE52 1622 aa11.14□□□□□ -0.63
NIF3L1-207ENST00000426253 DCAF8Q5TAQ9 597 aa11.14□□□□□ -0.63
NIF3L1-207ENST00000426253 CEP170Q5SW79 1584 aa11.13□□□□□ -0.63
NIF3L1-207ENST00000426253 PITPNM1O00562 1244 aa11.13□□□□□ -0.63
NIF3L1-207ENST00000426253 VSIG10Q8N0Z9 540 aa11.11□□□□□ -0.63
NIF3L1-207ENST00000426253 CHGAP10645 457 aaKnown RBP11.1□□□□□ -0.63
NIF3L1-207ENST00000426253 PAXIP1Q6ZW49 1069 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-207ENST00000426253 FAM212AQ96EL1 285 aa11.1□□□□□ -0.63
NIF3L1-207ENST00000426253 CCDC88BA6NC98 1476 aa11.1□□□□□ -0.63
NIF3L1-207ENST00000426253 MAPKBP1O60336 1514 aa11.09□□□□□ -0.63
NIF3L1-207ENST00000426253 PBRM1Q86U86 1689 aa11.08□□□□□ -0.64
NIF3L1-207ENST00000426253 SPRYD3Q8NCJ5 442 aa11.08□□□□□ -0.64
NIF3L1-207ENST00000426253 TAOK2Q9UL54 1235 aa11.08□□□□□ -0.64
NIF3L1-207ENST00000426253 CHRM1P11229 460 aaPredicted RBP11.07□□□□□ -0.64
NIF3L1-207ENST00000426253 SPATA31D1Q6ZQQ2 1576 aa11.07□□□□□ -0.64
NIF3L1-207ENST00000426253 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
NIF3L1-207ENST00000426253 HS6ST3Q8IZP7 471 aa11.05□□□□□ -0.64
NIF3L1-207ENST00000426253 RNF25Q96BH1 459 aaPredicted RBP11.05□□□□□ -0.64
NIF3L1-207ENST00000426253 SUPT5HO00267 1087 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms