RNA–Protein interactions for RNA: ENST00000422172.1

ARAFP1-201, Transcript of ARAF pseudogene 1, humanhuman

BASIC

Gene ARAFP1, Length 605 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAFP1-201ENST00000422172 NBR1Q14596 966 aa11.88□□□□□ -0.51
ARAFP1-201ENST00000422172 GSE1Q14687 1217 aa11.84□□□□□ -0.51
ARAFP1-201ENST00000422172 REM2Q8IYK8 340 aaPredicted RBP11.83□□□□□ -0.52
ARAFP1-201ENST00000422172 RNF25Q96BH1 459 aaPredicted RBP11.75□□□□□ -0.53
ARAFP1-201ENST00000422172 RIOK3O14730 519 aaKnown RBP11.71□□□□□ -0.53
ARAFP1-201ENST00000422172 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.53
ARAFP1-201ENST00000422172 SPDYE1Q8NFV5 336 aaPredicted RBP11.7□□□□□ -0.54
ARAFP1-201ENST00000422172 PITPNM1O00562 1244 aa11.69□□□□□ -0.54
ARAFP1-201ENST00000422172 NUBP1P53384 320 aa11.69□□□□□ -0.54
ARAFP1-201ENST00000422172 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
ARAFP1-201ENST00000422172 NKX1-1Q15270 411 aaPredicted RBP11.67□□□□□ -0.54
ARAFP1-201ENST00000422172 CLEC11AQ9Y240 323 aa11.67□□□□□ -0.54
ARAFP1-201ENST00000422172 RYDENQ9NUL5 291 aaKnown RBP11.66□□□□□ -0.54
ARAFP1-201ENST00000422172 VGFO15240 615 aaPredicted RBP11.65□□□□□ -0.54
ARAFP1-201ENST00000422172 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
ARAFP1-201ENST00000422172 CHRM1P11229 460 aaPredicted RBP11.62□□□□□ -0.55
ARAFP1-201ENST00000422172 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
ARAFP1-201ENST00000422172 FAM212AQ96EL1 285 aa11.6□□□□□ -0.55
ARAFP1-201ENST00000422172 STK25O00506 426 aa11.58□□□□□ -0.56
ARAFP1-201ENST00000422172 DCAF8Q5TAQ9 597 aa11.58□□□□□ -0.56
ARAFP1-201ENST00000422172 POTEHQ6S545 545 aa11.55□□□□□ -0.56
ARAFP1-201ENST00000422172 P3H3Q8IVL6 736 aa11.54□□□□□ -0.56
ARAFP1-201ENST00000422172 PRR29P0C7W0 189 aa11.53□□□□□ -0.56
ARAFP1-201ENST00000422172 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
ARAFP1-201ENST00000422172 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
ARAFP1-201ENST00000422172 GTF3C3Q9Y5Q9 886 aa11.49□□□□□ -0.57
ARAFP1-201ENST00000422172 MNX1P50219 401 aaPredicted RBP11.48□□□□□ -0.57
ARAFP1-201ENST00000422172 TMEM132AQ24JP5 1023 aa11.48□□□□□ -0.57
ARAFP1-201ENST00000422172 TIMELESSQ9UNS1 1208 aa11.48□□□□□ -0.57
ARAFP1-201ENST00000422172 CREBZFQ9NS37 354 aa11.47□□□□□ -0.57
ARAFP1-201ENST00000422172 BCL11BQ9C0K0 894 aaPredicted RBP11.46□□□□□ -0.57
ARAFP1-201ENST00000422172 STK24Q9Y6E0 443 aa11.46□□□□□ -0.57
ARAFP1-201ENST00000422172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.45□□□□□ -0.58
ARAFP1-201ENST00000422172 TULP1O00294 542 aaPredicted RBP11.45□□□□□ -0.58
ARAFP1-201ENST00000422172 ZFP91Q96JP5 570 aaPredicted RBP11.45□□□□□ -0.58
ARAFP1-201ENST00000422172 PRKAR2AP13861 404 aaKnown RBP11.42□□□□□ -0.58
ARAFP1-201ENST00000422172 RASEFQ8IZ41 740 aa11.4□□□□□ -0.58
ARAFP1-201ENST00000422172 CHADLQ6NUI6 762 aa11.36□□□□□ -0.59
ARAFP1-201ENST00000422172 ARXQ96QS3 562 aa11.34□□□□□ -0.59
ARAFP1-201ENST00000422172 WDR70Q9NW82 654 aa11.32□□□□□ -0.6
ARAFP1-201ENST00000422172 PYGBP11216 843 aa11.31□□□□□ -0.6
ARAFP1-201ENST00000422172 ZNF467Q7Z7K2 595 aaPredicted RBP11.31□□□□□ -0.6
ARAFP1-201ENST00000422172 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.3□□□□□ -0.6
ARAFP1-201ENST00000422172 KCNV2Q8TDN2 545 aa11.3□□□□□ -0.6
ARAFP1-201ENST00000422172 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
ARAFP1-201ENST00000422172 PDAP1Q13442 181 aaKnown RBP11.24□□□□□ -0.61
ARAFP1-201ENST00000422172 FARP1Q9Y4F1 1045 aaPredicted RBP11.24□□□□□ -0.61
ARAFP1-201ENST00000422172 HAX1O00165 279 aa11.23□□□□□ -0.61
ARAFP1-201ENST00000422172 CADPS2Q86UW7 1296 aa11.22□□□□□ -0.61
ARAFP1-201ENST00000422172 ARHGEF1Q92888 912 aaKnown RBP11.21□□□□□ -0.61
ARAFP1-201ENST00000422172 C14orf37Q86TY3 774 aa11.16□□□□□ -0.62
ARAFP1-201ENST00000422172 MFRPQ9BY79 579 aa11.15□□□□□ -0.62
ARAFP1-201ENST00000422172 BRPF1P55201 1214 aaPredicted RBP11.14□□□□□ -0.63
ARAFP1-201ENST00000422172 ZNF579Q8NAF0 562 aaKnown RBP11.13□□□□□ -0.63
ARAFP1-201ENST00000422172 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
ARAFP1-201ENST00000422172 E2F4Q16254 413 aa11.11□□□□□ -0.63
ARAFP1-201ENST00000422172 ZC3H15Q8WU90 426 aaKnown RBP11.1□□□□□ -0.63
ARAFP1-201ENST00000422172 TESPA1A2RU30 521 aaPredicted RBP11.09□□□□□ -0.63
ARAFP1-201ENST00000422172 CD44P16070 742 aaKnown RBP11.09□□□□□ -0.63
ARAFP1-201ENST00000422172 PSEN1P49768 467 aa11.09□□□□□ -0.63
ARAFP1-201ENST00000422172 DAXXQ9UER7 740 aaPredicted RBP11.08□□□□□ -0.64
ARAFP1-201ENST00000422172 HOMEZQ8IX15 550 aa11.07□□□□□ -0.64
ARAFP1-201ENST00000422172 TSPYL2Q9H2G4 693 aaPredicted RBP11.07□□□□□ -0.64
ARAFP1-201ENST00000422172 NLRP6P59044 892 aa11.06□□□□□ -0.64
ARAFP1-201ENST00000422172 SOX12O15370 315 aa11.05□□□□□ -0.64
ARAFP1-201ENST00000422172 PCDHB8Q9UN66 801 aa11.05□□□□□ -0.64
ARAFP1-201ENST00000422172 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
ARAFP1-201ENST00000422172 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
ARAFP1-201ENST00000422172 PAK3O75914 559 aaPredicted RBP11.04□□□□□ -0.64
ARAFP1-201ENST00000422172 EVX2Q03828 476 aa11.04□□□□□ -0.64
ARAFP1-201ENST00000422172 FBXO22Q8NEZ5 403 aa11.04□□□□□ -0.64
ARAFP1-201ENST00000422172 SMYD5Q6GMV2 418 aa11.03□□□□□ -0.64
ARAFP1-201ENST00000422172 ARIH1Q9Y4X5 557 aaPredicted RBP11.03□□□□□ -0.64
ARAFP1-201ENST00000422172 SP7Q8TDD2 431 aaPredicted RBP11.02□□□□□ -0.65
ARAFP1-201ENST00000422172 NEUROD2Q15784 382 aa11.01□□□□□ -0.65
ARAFP1-201ENST00000422172 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
ARAFP1-201ENST00000422172 SEMA3EO15041 775 aa10.99□□□□□ -0.65
ARAFP1-201ENST00000422172 ZMYND10O75800 440 aa10.98□□□□□ -0.65
ARAFP1-201ENST00000422172 PPP1R37O75864 691 aa10.98□□□□□ -0.65
ARAFP1-201ENST00000422172 MFSD10Q14728 455 aa10.97□□□□□ -0.65
ARAFP1-201ENST00000422172 SLC24A3Q9HC58 644 aa10.96□□□□□ -0.65
ARAFP1-201ENST00000422172 EFCAB3Q8N7B9 438 aa10.95□□□□□ -0.66
ARAFP1-201ENST00000422172 PDE4AP27815 886 aa10.94□□□□□ -0.66
ARAFP1-201ENST00000422172 NCKAP5LQ9HCH0 1330 aa10.92□□□□□ -0.66
ARAFP1-201ENST00000422172 IFNL1Q8IU54 200 aa10.92□□□□□ -0.66
ARAFP1-201ENST00000422172 CABP2Q9NPB3 220 aa10.92□□□□□ -0.66
ARAFP1-201ENST00000422172 PHF8Q9UPP1 1060 aa10.92□□□□□ -0.66
ARAFP1-201ENST00000422172 BARGINQ6ZT62 677 aa10.91□□□□□ -0.66
ARAFP1-201ENST00000422172 CRISPLD2Q9H0B8 497 aa10.9□□□□□ -0.66
ARAFP1-201ENST00000422172 CAMK2BQ13554 666 aa10.89□□□□□ -0.67
ARAFP1-201ENST00000422172 LARP6Q9BRS8 491 aaKnown RBP10.88□□□□□ -0.67
ARAFP1-201ENST00000422172 KIF12Q96FN5 646 aa10.87□□□□□ -0.67
ARAFP1-201ENST00000422172 DDX27Q96GQ7 796 aaKnown RBP10.87□□□□□ -0.67
ARAFP1-201ENST00000422172 CLCN6P51797 869 aa10.86□□□□□ -0.67
ARAFP1-201ENST00000422172 PHF12Q96QT6 1004 aa10.86□□□□□ -0.67
ARAFP1-201ENST00000422172 GABBR2O75899 941 aa10.85□□□□□ -0.67
ARAFP1-201ENST00000422172 MAP3K13O43283 966 aa10.84□□□□□ -0.67
ARAFP1-201ENST00000422172 AK7Q96M32 723 aa10.84□□□□□ -0.67
ARAFP1-201ENST00000422172 MS4A4AQ96JQ5 239 aa10.81□□□□□ -0.68
ARAFP1-201ENST00000422172 GPIHBP1Q8IV16 184 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms