RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 TSPYL2Q9H2G4 693 aaPredicted RBP12.83□□□□□ -0.36
LINC00397-201ENST00000422074 SPOCK2Q92563 424 aa12.81□□□□□ -0.36
LINC00397-201ENST00000422074 FAM212AQ96EL1 285 aa12.79□□□□□ -0.36
LINC00397-201ENST00000422074 PHF12Q96QT6 1004 aa12.78□□□□□ -0.36
LINC00397-201ENST00000422074 KIF12Q96FN5 646 aa12.73□□□□□ -0.37
LINC00397-201ENST00000422074 GSE1Q14687 1217 aa12.72□□□□□ -0.37
LINC00397-201ENST00000422074 DCAF8Q5TAQ9 597 aa12.71□□□□□ -0.37
LINC00397-201ENST00000422074 GALR2O43603 387 aaPredicted RBP12.68□□□□□ -0.38
LINC00397-201ENST00000422074 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
LINC00397-201ENST00000422074 MAP3K13O43283 966 aa12.65□□□□□ -0.38
LINC00397-201ENST00000422074 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
LINC00397-201ENST00000422074 MS4A3Q96HJ5 214 aa12.64□□□□□ -0.39
LINC00397-201ENST00000422074 POTEIP0CG38 1075 aa12.59□□□□□ -0.39
LINC00397-201ENST00000422074 PYGBP11216 843 aa12.58□□□□□ -0.4
LINC00397-201ENST00000422074 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
LINC00397-201ENST00000422074 PCDHB13Q9Y5F0 798 aa12.57□□□□□ -0.4
LINC00397-201ENST00000422074 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
LINC00397-201ENST00000422074 IFNL1Q8IU54 200 aa12.54□□□□□ -0.4
LINC00397-201ENST00000422074 DCBLD2Q96PD2 775 aa12.54□□□□□ -0.4
LINC00397-201ENST00000422074 ASTLQ6HA08 431 aaPredicted RBP12.51□□□□□ -0.41
LINC00397-201ENST00000422074 TIE1P35590 1138 aa12.5□□□□□ -0.41
LINC00397-201ENST00000422074 TRPC6Q9Y210 931 aa12.49□□□□□ -0.41
LINC00397-201ENST00000422074 ATMINO43313 823 aaPredicted RBP12.47□□□□□ -0.41
LINC00397-201ENST00000422074 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
LINC00397-201ENST00000422074 BMP2KQ9NSY1 1161 aaPredicted RBP12.46□□□□□ -0.41
LINC00397-201ENST00000422074 PCDHB8Q9UN66 801 aa12.45□□□□□ -0.42
LINC00397-201ENST00000422074 PKD2Q13563 968 aa12.44□□□□□ -0.42
LINC00397-201ENST00000422074 PELP1Q8IZL8 1130 aaKnown RBP12.42□□□□□ -0.42
LINC00397-201ENST00000422074 TTLL13PA6NNM8 815 aa12.41□□□□□ -0.42
LINC00397-201ENST00000422074 ATN1P54259 1190 aaPredicted RBP12.41□□□□□ -0.42
LINC00397-201ENST00000422074 RNF25Q96BH1 459 aaPredicted RBP12.36□□□□□ -0.43
LINC00397-201ENST00000422074 TMEM106CQ9BVX2 250 aa12.36□□□□□ -0.43
LINC00397-201ENST00000422074 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
LINC00397-201ENST00000422074 PDAP1Q13442 181 aaKnown RBP12.33□□□□□ -0.44
LINC00397-201ENST00000422074 RIOK3O14730 519 aaKnown RBP12.32□□□□□ -0.44
LINC00397-201ENST00000422074 ECM2O94769 699 aaPredicted RBP12.32□□□□□ -0.44
LINC00397-201ENST00000422074 C7P10643 843 aa12.32□□□□□ -0.44
LINC00397-201ENST00000422074 PSEN1P49768 467 aa12.32□□□□□ -0.44
LINC00397-201ENST00000422074 IER5LQ5T953 404 aa12.3□□□□□ -0.44
LINC00397-201ENST00000422074 TRIM35Q9UPQ4 493 aa12.3□□□□□ -0.44
LINC00397-201ENST00000422074 METRNQ9UJH8 293 aa12.27□□□□□ -0.45
LINC00397-201ENST00000422074 VGFO15240 615 aaPredicted RBP12.26□□□□□ -0.45
LINC00397-201ENST00000422074 RGL2O15211 777 aa12.24□□□□□ -0.45
LINC00397-201ENST00000422074 POTEFA5A3E0 1075 aa12.22□□□□□ -0.45
LINC00397-201ENST00000422074 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
LINC00397-201ENST00000422074 LHX8Q68G74 356 aa12.21□□□□□ -0.45
LINC00397-201ENST00000422074 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.19□□□□□ -0.46
LINC00397-201ENST00000422074 ZFP91Q96JP5 570 aaPredicted RBP12.19□□□□□ -0.46
LINC00397-201ENST00000422074 IRX5P78411 483 aaPredicted RBP12.18□□□□□ -0.46
LINC00397-201ENST00000422074 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
LINC00397-201ENST00000422074 COLQQ9Y215 455 aaPredicted RBP12.17□□□□□ -0.46
LINC00397-201ENST00000422074 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
LINC00397-201ENST00000422074 GOLGA2Q08379 1002 aa12.14□□□□□ -0.47
LINC00397-201ENST00000422074 CABP2Q9NPB3 220 aa12.14□□□□□ -0.47
LINC00397-201ENST00000422074 SEC24BO95487 1268 aa12.13□□□□□ -0.47
LINC00397-201ENST00000422074 MKRN3Q13064 507 aaKnown RBP12.13□□□□□ -0.47
LINC00397-201ENST00000422074 OCEL1Q9H607 264 aa12.13□□□□□ -0.47
LINC00397-201ENST00000422074 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
LINC00397-201ENST00000422074 POTEJP0CG39 1038 aa12.1□□□□□ -0.47
LINC00397-201ENST00000422074 PLCG2P16885 1265 aa12.08□□□□□ -0.48
LINC00397-201ENST00000422074 EFCAB3Q8N7B9 438 aa12.08□□□□□ -0.48
LINC00397-201ENST00000422074 PDCD7Q8N8D1 485 aaKnown RBP12.08□□□□□ -0.48
LINC00397-201ENST00000422074 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
LINC00397-201ENST00000422074 STK25O00506 426 aa12.06□□□□□ -0.48
LINC00397-201ENST00000422074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC00397-201ENST00000422074 SOX12O15370 315 aa12.05□□□□□ -0.48
LINC00397-201ENST00000422074 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
LINC00397-201ENST00000422074 HS6ST3Q8IZP7 471 aa12.03□□□□□ -0.48
LINC00397-201ENST00000422074 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
LINC00397-201ENST00000422074 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
LINC00397-201ENST00000422074 MAMSTRQ6ZN01 415 aa12.02□□□□□ -0.49
LINC00397-201ENST00000422074 DNAJC5Q9H3Z4 198 aa12□□□□□ -0.49
LINC00397-201ENST00000422074 DPY19L2Q6NUT2 758 aa11.95□□□□□ -0.5
LINC00397-201ENST00000422074 FBXO22Q8NEZ5 403 aa11.95□□□□□ -0.5
LINC00397-201ENST00000422074 L3MBTL3Q96JM7 780 aaPredicted RBP11.95□□□□□ -0.5
LINC00397-201ENST00000422074 CHGAP10645 457 aaKnown RBP11.94□□□□□ -0.5
LINC00397-201ENST00000422074 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
LINC00397-201ENST00000422074 MFRPQ9BY79 579 aa11.94□□□□□ -0.5
LINC00397-201ENST00000422074 SCUBE2Q9NQ36 999 aa11.94□□□□□ -0.5
LINC00397-201ENST00000422074 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
LINC00397-201ENST00000422074 NLRP6P59044 892 aa11.93□□□□□ -0.5
LINC00397-201ENST00000422074 TMEM121BQ9BXQ6 578 aaPredicted RBP11.9□□□□□ -0.5
LINC00397-201ENST00000422074 BOLA1Q9Y3E2 137 aa11.87□□□□□ -0.51
LINC00397-201ENST00000422074 NKX1-1Q15270 411 aaPredicted RBP11.85□□□□□ -0.51
LINC00397-201ENST00000422074 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.83□□□□□ -0.52
LINC00397-201ENST00000422074 DCAF8L2P0C7V8 631 aa11.82□□□□□ -0.52
LINC00397-201ENST00000422074 MICALL2Q8IY33 904 aa11.81□□□□□ -0.52
LINC00397-201ENST00000422074 C3orf67Q6ZVT6 689 aa11.8□□□□□ -0.52
LINC00397-201ENST00000422074 G3V3G9 751 aa11.79□□□□□ -0.52
LINC00397-201ENST00000422074 SLAIN1Q8ND83 568 aa11.78□□□□□ -0.52
LINC00397-201ENST00000422074 RYDENQ9NUL5 291 aaKnown RBP11.77□□□□□ -0.53
LINC00397-201ENST00000422074 PPP1R37O75864 691 aa11.74□□□□□ -0.53
LINC00397-201ENST00000422074 GTPBP6O43824 516 aaPredicted RBP11.72□□□□□ -0.53
LINC00397-201ENST00000422074 BBXQ8WY36 941 aaPredicted RBP11.72□□□□□ -0.53
LINC00397-201ENST00000422074 TMEM92Q6UXU6 159 aa11.69□□□□□ -0.54
LINC00397-201ENST00000422074 SNPHO15079 494 aa11.64□□□□□ -0.55
LINC00397-201ENST00000422074 KIF3CO14782 793 aa11.63□□□□□ -0.55
LINC00397-201ENST00000422074 LCE2DQ5TA82 110 aaPredicted RBP11.62□□□□□ -0.55
LINC00397-201ENST00000422074 HOXB3P14651 431 aaPredicted RBP11.57□□□□□ -0.56
LINC00397-201ENST00000422074 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms