RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 PRDM2Q13029 1718 aa13.22□□□□□ -0.29
SSB-205ENST00000422006 URB2Q14146 1524 aaKnown RBP13.19□□□□□ -0.3
SSB-205ENST00000422006 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
SSB-205ENST00000422006 MROH2BQ7Z745 1585 aa13.18□□□□□ -0.3
SSB-205ENST00000422006 TRHP20396 242 aaPredicted RBP13.16□□□□□ -0.3
SSB-205ENST00000422006 MAPK8IP2Q13387 824 aaPredicted RBP13.15□□□□□ -0.3
SSB-205ENST00000422006 ARXQ96QS3 562 aa13.13□□□□□ -0.31
SSB-205ENST00000422006 UBE2Q2Q8WVN8 375 aa13.12□□□□□ -0.31
SSB-205ENST00000422006 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
SSB-205ENST00000422006 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
SSB-205ENST00000422006 EIF4G3O43432 1585 aaKnown RBP13.07□□□□□ -0.32
SSB-205ENST00000422006 CLASP1Q7Z460 1538 aa13.05□□□□□ -0.32
SSB-205ENST00000422006 CHD1O14646 1710 aa13.05□□□□□ -0.32
SSB-205ENST00000422006 SYNJ1O43426 1573 aa13.04□□□□□ -0.32
SSB-205ENST00000422006 TOP2AP11388 1531 aaKnown RBP13.02□□□□□ -0.32
SSB-205ENST00000422006 TRIM26Q12899 539 aaPredicted RBP13.02□□□□□ -0.32
SSB-205ENST00000422006 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.33
SSB-205ENST00000422006 TOPBP1Q92547 1522 aa13.01□□□□□ -0.33
SSB-205ENST00000422006 ZNF608Q9ULD9 1512 aaPredicted RBP13□□□□□ -0.33
SSB-205ENST00000422006 KDM2AQ9Y2K7 1162 aa13□□□□□ -0.33
SSB-205ENST00000422006 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
SSB-205ENST00000422006 TARBP1Q13395 1621 aaKnown RBP12.97□□□□□ -0.33
SSB-205ENST00000422006 MAGI1Q96QZ7 1491 aaPredicted RBP12.96□□□□□ -0.33
SSB-205ENST00000422006 MSH5O43196 834 aa12.96□□□□□ -0.34
SSB-205ENST00000422006 WIZO95785 1651 aa12.94□□□□□ -0.34
SSB-205ENST00000422006 FBLN2P98095 1184 aa12.94□□□□□ -0.34
SSB-205ENST00000422006 TSHZ2Q9NRE2 1034 aa12.93□□□□□ -0.34
SSB-205ENST00000422006 RNF216Q9NWF9 866 aaPredicted RBP12.92□□□□□ -0.34
SSB-205ENST00000422006 VSIG10Q8N0Z9 540 aa12.91□□□□□ -0.34
SSB-205ENST00000422006 SYNJ2O15056 1496 aa12.85□□□□□ -0.35
SSB-205ENST00000422006 GAPVD1Q14C86 1478 aa12.85□□□□□ -0.35
SSB-205ENST00000422006 DIEXFQ68CQ4 756 aaKnown RBP12.84□□□□□ -0.35
SSB-205ENST00000422006 SALL2Q9Y467 1007 aaPredicted RBP12.83□□□□□ -0.36
SSB-205ENST00000422006 GRIN2BQ13224 1484 aa12.82□□□□□ -0.36
SSB-205ENST00000422006 PKNOX2Q96KN3 472 aa12.8□□□□□ -0.36
SSB-205ENST00000422006 AQRO60306 1485 aaKnown RBP eCLIP12.8□□□□□ -0.366e-9■■■■■ 32.8
SSB-205ENST00000422006 HOMEZQ8IX15 550 aa12.79□□□□□ -0.36
SSB-205ENST00000422006 PODXL2Q9NZ53 605 aa12.79□□□□□ -0.36
SSB-205ENST00000422006 ERCC6L2Q5T890 1561 aa12.79□□□□□ -0.36
SSB-205ENST00000422006 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
SSB-205ENST00000422006 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
SSB-205ENST00000422006 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
SSB-205ENST00000422006 ILDR1Q86SU0 546 aaPredicted RBP12.78□□□□□ -0.36
SSB-205ENST00000422006 CHMP7Q8WUX9 453 aaPredicted RBP12.75□□□□□ -0.37
SSB-205ENST00000422006 CCDC136Q96JN2 1154 aa12.75□□□□□ -0.37
SSB-205ENST00000422006 SOGA1O94964 1423 aa12.74□□□□□ -0.37
SSB-205ENST00000422006 ERICH6BQ5W0A0 696 aa12.73□□□□□ -0.37
SSB-205ENST00000422006 CLSPNQ9HAW4 1339 aa12.73□□□□□ -0.37
SSB-205ENST00000422006 CCDC88BA6NC98 1476 aa12.7□□□□□ -0.38
SSB-205ENST00000422006 SHROOM2Q13796 1616 aa12.7□□□□□ -0.38
SSB-205ENST00000422006 MAPKBP1O60336 1514 aa12.7□□□□□ -0.38
SSB-205ENST00000422006 SUPT16HQ9Y5B9 1047 aaKnown RBP12.69□□□□□ -0.38
SSB-205ENST00000422006 KIF13AQ9H1H9 1805 aa12.69□□□□□ -0.38
SSB-205ENST00000422006 ABCC10Q5T3U5 1492 aa12.67□□□□□ -0.38
SSB-205ENST00000422006 YTHDC1Q96MU7 727 aaKnown RBP12.67□□□□□ -0.38
SSB-205ENST00000422006 HOXD11P31277 338 aaPredicted RBP12.65□□□□□ -0.38
SSB-205ENST00000422006 MYT1LQ9UL68 1186 aa12.65□□□□□ -0.38
SSB-205ENST00000422006 PBRM1Q86U86 1689 aa12.65□□□□□ -0.38
SSB-205ENST00000422006 NUP160Q12769 1436 aa12.64□□□□□ -0.39
SSB-205ENST00000422006 TMEM132AQ24JP5 1023 aa12.63□□□□□ -0.39
SSB-205ENST00000422006 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
SSB-205ENST00000422006 CEP170Q5SW79 1584 aa12.62□□□□□ -0.39
SSB-205ENST00000422006 KDM6BO15054 1643 aa12.62□□□□□ -0.39
SSB-205ENST00000422006 FGD5Q6ZNL6 1462 aa12.6□□□□□ -0.39
SSB-205ENST00000422006 TDRD9Q8NDG6 1382 aaKnown RBP12.59□□□□□ -0.39
SSB-205ENST00000422006 ABCA5Q8WWZ7 1642 aa12.59□□□□□ -0.39
SSB-205ENST00000422006 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
SSB-205ENST00000422006 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
SSB-205ENST00000422006 GRIN2AQ12879 1464 aa12.58□□□□□ -0.39
SSB-205ENST00000422006 RAD54L2Q9Y4B4 1467 aa12.58□□□□□ -0.39
SSB-205ENST00000422006 DEKP35659 375 aaKnown RBP12.58□□□□□ -0.4
SSB-205ENST00000422006 DIP2BQ9P265 1576 aa12.57□□□□□ -0.4
SSB-205ENST00000422006 KDM4FA0A1W2PPD8 638 aa12.56□□□□□ -0.4
SSB-205ENST00000422006 FBXO41Q8TF61 875 aa12.55□□□□□ -0.4
SSB-205ENST00000422006 NPM1P06748 294 aaKnown RBP eCLIP12.54□□□□□ -0.4
SSB-205ENST00000422006 PKD2Q13563 968 aa12.53□□□□□ -0.4
SSB-205ENST00000422006 ADAMTS12P58397 1594 aa12.53□□□□□ -0.4
SSB-205ENST00000422006 ATXN8OSP0DMR3 200 aa12.52□□□□□ -0.4
SSB-205ENST00000422006 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.52□□□□□ -0.4
SSB-205ENST00000422006 FHAD1B1AJZ9 1412 aa12.52□□□□□ -0.41
SSB-205ENST00000422006 GLI2P10070 1586 aa12.52□□□□□ -0.41
SSB-205ENST00000422006 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
SSB-205ENST00000422006 PAXIP1Q6ZW49 1069 aaPredicted RBP12.51□□□□□ -0.41
SSB-205ENST00000422006 RBM19Q9Y4C8 960 aaKnown RBP12.5□□□□□ -0.41
SSB-205ENST00000422006 CFAP44Q96MT7 982 aa12.49□□□□□ -0.41
SSB-205ENST00000422006 C14orf37Q86TY3 774 aa12.49□□□□□ -0.41
SSB-205ENST00000422006 ERICH3Q5RHP9 1530 aa12.49□□□□□ -0.41
SSB-205ENST00000422006 CUX1P39880 1505 aa12.47□□□□□ -0.41
SSB-205ENST00000422006 HECW2Q9P2P5 1572 aa12.47□□□□□ -0.41
SSB-205ENST00000422006 FAM69CQ0P6D2 419 aa12.46□□□□□ -0.41
SSB-205ENST00000422006 ADGRL1O94910 1474 aa12.46□□□□□ -0.42
SSB-205ENST00000422006 KLHL34Q8N239 644 aa12.45□□□□□ -0.42
SSB-205ENST00000422006 SUPT5HO00267 1087 aaKnown RBP12.42□□□□□ -0.42
SSB-205ENST00000422006 RANGAP1P46060 587 aaPredicted RBP12.42□□□□□ -0.42
SSB-205ENST00000422006 LOC105371045A0A1W2PR82 267 aa12.42□□□□□ -0.42
SSB-205ENST00000422006 TEX14Q8IWB6 1497 aa12.42□□□□□ -0.42
SSB-205ENST00000422006 PRG4Q92954 1404 aaPredicted RBP12.41□□□□□ -0.42
SSB-205ENST00000422006 NEFLP07196 543 aa12.41□□□□□ -0.42
SSB-205ENST00000422006 PLB1Q6P1J6 1458 aa12.41□□□□□ -0.42
SSB-205ENST00000422006 IFNLR1Q8IU57 520 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms