RNA–Protein interactions for RNA: ENST00000418381.5

UBR3-203, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 7,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-203ENST00000418381 ISY1Q9ULR0 285 aaKnown RBP23.58■■□□□ 1.36
UBR3-203ENST00000418381 GOLGA2Q08379 1002 aa23.57■■□□□ 1.36
UBR3-203ENST00000418381 HNRNPUQ00839 825 aaKnown RBP eCLIP23.56■■□□□ 1.36
UBR3-203ENST00000418381 TONSLQ96HA7 1378 aa23.56■■□□□ 1.36
UBR3-203ENST00000418381 PRM3Q9NNZ6 103 aa23.52■■□□□ 1.36
UBR3-203ENST00000418381 NCLP19338 710 aaKnown RBP23.52■■□□□ 1.36
UBR3-203ENST00000418381 FKBP8Q14318 412 aa23.51■■□□□ 1.35
UBR3-203ENST00000418381 LAS1LQ9Y4W2 734 aaKnown RBP23.51■■□□□ 1.35
UBR3-203ENST00000418381 NAP1L2Q9ULW6 460 aaPredicted RBP23.48■■□□□ 1.35
UBR3-203ENST00000418381 CHMP7Q8WUX9 453 aaPredicted RBP23.43■■□□□ 1.34
UBR3-203ENST00000418381 CCDC136Q96JN2 1154 aa23.42■■□□□ 1.34
UBR3-203ENST00000418381 GLIPR1L2Q4G1C9 344 aa23.38■■□□□ 1.33
UBR3-203ENST00000418381 SENP3-EIF4A1A0A087X0R7 540 aa23.38■■□□□ 1.33
UBR3-203ENST00000418381 AMER1Q5JTC6 1135 aaPredicted RBP23.37■■□□□ 1.33
UBR3-203ENST00000418381 TSPY4P0CV99 314 aa23.37■■□□□ 1.33
UBR3-203ENST00000418381 TSPY10P0CW01 314 aa23.37■■□□□ 1.33
UBR3-203ENST00000418381 DDX10Q13206 875 aaKnown RBP23.36■■□□□ 1.33
UBR3-203ENST00000418381 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.35■■□□□ 1.33
UBR3-203ENST00000418381 OS9Q13438 667 aaPredicted RBP23.33■■□□□ 1.33
UBR3-203ENST00000418381 CASC1Q6TDU7 716 aa23.31■■□□□ 1.32
UBR3-203ENST00000418381 IRX6P78412 446 aaPredicted RBP23.31■■□□□ 1.32
UBR3-203ENST00000418381 SOX12O15370 315 aa23.31■■□□□ 1.32
UBR3-203ENST00000418381 FGD1P98174 961 aa23.3■■□□□ 1.32
UBR3-203ENST00000418381 PTMAP06454 111 aaKnown RBP23.3■■□□□ 1.32
UBR3-203ENST00000418381 DNTTIP2Q5QJE6 756 aaKnown RBP23.29■■□□□ 1.32
UBR3-203ENST00000418381 RGL3Q3MIN7 710 aa23.27■■□□□ 1.32
UBR3-203ENST00000418381 PLCB2Q00722 1185 aa23.27■■□□□ 1.31
UBR3-203ENST00000418381 TRIM44Q96DX7 344 aaPredicted RBP23.27■■□□□ 1.31
UBR3-203ENST00000418381 MLECQ14165 292 aa23.23■■□□□ 1.31
UBR3-203ENST00000418381 FTSJ3Q8IY81 847 aaKnown RBP23.22■■□□□ 1.31
UBR3-203ENST00000418381 KRI1Q8N9T8 703 aaKnown RBP23.22■■□□□ 1.31
UBR3-203ENST00000418381 CCDC9Q9Y3X0 531 aaKnown RBP23.22■■□□□ 1.31
UBR3-203ENST00000418381 HIRIP3Q9BW71 556 aaPredicted RBP23.22■■□□□ 1.31
UBR3-203ENST00000418381 TNNT2P45379 298 aaPredicted RBP23.2■■□□□ 1.3
UBR3-203ENST00000418381 KCNJ4P48050 445 aa23.19■■□□□ 1.3
UBR3-203ENST00000418381 NEUROD2Q15784 382 aa23.19■■□□□ 1.3
UBR3-203ENST00000418381 MRS2Q9HD23 443 aa23.17■■□□□ 1.3
UBR3-203ENST00000418381 POGKQ9P215 609 aa23.17■■□□□ 1.3
UBR3-203ENST00000418381 ANO8Q9HCE9 1232 aaPredicted RBP23.17■■□□□ 1.3
UBR3-203ENST00000418381 ZNF330Q9Y3S2 320 aaPredicted RBP23.16■■□□□ 1.3
UBR3-203ENST00000418381 GOLGA6L22H0YM25 854 aa23.15■■□□□ 1.3
UBR3-203ENST00000418381 TMX4Q9H1E5 349 aaPredicted RBP23.15■■□□□ 1.3
UBR3-203ENST00000418381 PDE4CQ08493 712 aa23.13■■□□□ 1.29
UBR3-203ENST00000418381 BECN1Q14457 450 aa23.12■■□□□ 1.29
UBR3-203ENST00000418381 CFAP53Q96M91 514 aa23.11■■□□□ 1.29
UBR3-203ENST00000418381 RRP7BPQ9NSQ0 103 aa23.07■■□□□ 1.28
UBR3-203ENST00000418381 G3V3G9 751 aa23.06■■□□□ 1.28
UBR3-203ENST00000418381 DCAF8Q5TAQ9 597 aa23.06■■□□□ 1.28
UBR3-203ENST00000418381 SCRIBQ14160 1630 aa23.06■■□□□ 1.28
UBR3-203ENST00000418381 MAPK8IP3Q9UPT6 1336 aa23.05■■□□□ 1.28
UBR3-203ENST00000418381 MTUS2Q5JR59 1369 aa23.02■■□□□ 1.28
UBR3-203ENST00000418381 PAK3O75914 559 aaPredicted RBP23.01■■□□□ 1.27
UBR3-203ENST00000418381 GOLGA6L6A8MZA4 724 aa23.01■■□□□ 1.27
UBR3-203ENST00000418381 GNL2Q13823 731 aaKnown RBP23■■□□□ 1.27
UBR3-203ENST00000418381 CSRNP3Q8WYN3 585 aa23■■□□□ 1.27
UBR3-203ENST00000418381 U2SURPO15042 1029 aaKnown RBP22.99■■□□□ 1.27
UBR3-203ENST00000418381 EIF4G2P78344 907 aaKnown RBP eCLIP22.98■■□□□ 1.272e-10■■■□□ 17.3
UBR3-203ENST00000418381 KNSTRNQ9Y448 316 aa22.97■■□□□ 1.27
UBR3-203ENST00000418381 FBXO3Q9UK99 471 aa22.96■■□□□ 1.27
UBR3-203ENST00000418381 AEBP2Q6ZN18 517 aaPredicted RBP22.96■■□□□ 1.27
UBR3-203ENST00000418381 ERICH6BQ5W0A0 696 aa22.95■■□□□ 1.26
UBR3-203ENST00000418381 FRAT1Q92837 279 aaPredicted RBP22.94■■□□□ 1.26
UBR3-203ENST00000418381 CSB-PGBD3P0DP91 1061 aa22.93■■□□□ 1.26
UBR3-203ENST00000418381 NOC3LQ8WTT2 800 aaKnown RBP22.92■■□□□ 1.26
UBR3-203ENST00000418381 SAFB2Q14151 953 aaKnown RBP eCLIP22.91■■□□□ 1.26
UBR3-203ENST00000418381 HSP90AB1P08238 724 aaKnown RBP22.89■■□□□ 1.25
UBR3-203ENST00000418381 ERCC6Q03468 1493 aa22.89■■□□□ 1.25
UBR3-203ENST00000418381 KIAA2012Q0VF49 1180 aa22.88■■□□□ 1.25
UBR3-203ENST00000418381 PHF23Q9BUL5 403 aaPredicted RBP22.88■■□□□ 1.25
UBR3-203ENST00000418381 PLEKHD1A6NEE1 506 aa22.87■■□□□ 1.25
UBR3-203ENST00000418381 GOLGA6L4A6NEF3 574 aa22.87■■□□□ 1.25
UBR3-203ENST00000418381 DDRGK1Q96HY6 314 aa22.87■■□□□ 1.25
UBR3-203ENST00000418381 DRC7Q8IY82 874 aa22.86■■□□□ 1.25
UBR3-203ENST00000418381 ACIN1Q9UKV3 1341 aaKnown RBP22.85■■□□□ 1.25
UBR3-203ENST00000418381 NUDCQ9Y266 331 aa22.84■■□□□ 1.25
UBR3-203ENST00000418381 VPS53Q5VIR6 699 aa22.84■■□□□ 1.25
UBR3-203ENST00000418381 PNNQ9H307 717 aaKnown RBP22.83■■□□□ 1.24
UBR3-203ENST00000418381 CHMP3Q9Y3E7 222 aa22.83■■□□□ 1.24
UBR3-203ENST00000418381 MSH5O43196 834 aa22.82■■□□□ 1.24
UBR3-203ENST00000418381 CC2D1BQ5T0F9 858 aaKnown RBP22.81■■□□□ 1.24
UBR3-203ENST00000418381 WWC1Q8IX03 1113 aa22.8■■□□□ 1.24
UBR3-203ENST00000418381 KLHL34Q8N239 644 aa22.8■■□□□ 1.24
UBR3-203ENST00000418381 SRPK2P78362 688 aaKnown RBP22.79■■□□□ 1.24
UBR3-203ENST00000418381 APBB1O00213 710 aa22.79■■□□□ 1.24
UBR3-203ENST00000418381 CNKSR2Q8WXI2 1034 aa22.78■■□□□ 1.24
UBR3-203ENST00000418381 RTF1Q92541 710 aaKnown RBP22.78■■□□□ 1.24
UBR3-203ENST00000418381 NRDCO43847 1150 aa22.77■■□□□ 1.24
UBR3-203ENST00000418381 RGS3P49796 1198 aa22.76■■□□□ 1.23
UBR3-203ENST00000418381 STK26Q9P289 416 aa22.76■■□□□ 1.23
UBR3-203ENST00000418381 CDCA8Q53HL2 280 aa22.74■■□□□ 1.23
UBR3-203ENST00000418381 SPRYD3Q8NCJ5 442 aa22.74■■□□□ 1.23
UBR3-203ENST00000418381 TAF7LQ5H9L4 462 aa22.73■■□□□ 1.23
UBR3-203ENST00000418381 NAP1L5Q96NT1 182 aaPredicted RBP22.73■■□□□ 1.23
UBR3-203ENST00000418381 CREBRFQ8IUR6 639 aa22.72■■□□□ 1.23
UBR3-203ENST00000418381 ANP32EQ9BTT0 268 aa22.71■■□□□ 1.23
UBR3-203ENST00000418381 MEX3CQ5U5Q3 659 aaKnown RBP22.7■■□□□ 1.22
UBR3-203ENST00000418381 CARD11Q9BXL7 1154 aa22.7■■□□□ 1.22
UBR3-203ENST00000418381 CHAF1AQ13111 956 aaPredicted RBP22.69■■□□□ 1.22
UBR3-203ENST00000418381 GORABQ5T7V8 394 aa22.69■■□□□ 1.22
UBR3-203ENST00000418381 A0A0U1RQG5 324 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms