RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 TSPYL2Q9H2G4 693 aaPredicted RBP6.66□□□□□ -1.34
GTF3C3-203ENST00000416690 SLC39A7Q92504 469 aa6.65□□□□□ -1.34
GTF3C3-203ENST00000416690 C7P10643 843 aa6.64□□□□□ -1.35
GTF3C3-203ENST00000416690 METRNQ9UJH8 293 aa6.64□□□□□ -1.35
GTF3C3-203ENST00000416690 CCDC61Q9Y6R9 512 aa6.64□□□□□ -1.35
GTF3C3-203ENST00000416690 POTEMA6NI47 508 aa6.61□□□□□ -1.35
GTF3C3-203ENST00000416690 POTEJP0CG39 1038 aa6.61□□□□□ -1.35
GTF3C3-203ENST00000416690 KIF12Q96FN5 646 aa6.61□□□□□ -1.35
GTF3C3-203ENST00000416690 ATN1P54259 1190 aaPredicted RBP6.6□□□□□ -1.35
GTF3C3-203ENST00000416690 POTEGQ6S5H5 508 aa6.59□□□□□ -1.35
GTF3C3-203ENST00000416690 MIER1Q8N108 512 aa6.59□□□□□ -1.35
GTF3C3-203ENST00000416690 PLEKHG5O94827 1062 aa6.58□□□□□ -1.36
GTF3C3-203ENST00000416690 MAMSTRQ6ZN01 415 aa6.58□□□□□ -1.36
GTF3C3-203ENST00000416690 MAP3K13O43283 966 aa6.56□□□□□ -1.36
GTF3C3-203ENST00000416690 RASEFQ8IZ41 740 aa6.56□□□□□ -1.36
GTF3C3-203ENST00000416690 BMP2KQ9NSY1 1161 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-203ENST00000416690 TRPC6Q9Y210 931 aa6.56□□□□□ -1.36
GTF3C3-203ENST00000416690 POTEFA5A3E0 1075 aa6.55□□□□□ -1.36
GTF3C3-203ENST00000416690 TIE1P35590 1138 aa6.54□□□□□ -1.36
GTF3C3-203ENST00000416690 SCUBE2Q9NQ36 999 aa6.54□□□□□ -1.36
GTF3C3-203ENST00000416690 PCDH10Q9P2E7 1040 aa6.52□□□□□ -1.37
GTF3C3-203ENST00000416690 TTLL13PA6NNM8 815 aa6.5□□□□□ -1.37
GTF3C3-203ENST00000416690 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
GTF3C3-203ENST00000416690 PLCD3Q8N3E9 789 aa6.5□□□□□ -1.37
GTF3C3-203ENST00000416690 FAM163AQ96GL9 167 aaPredicted RBP6.5□□□□□ -1.37
GTF3C3-203ENST00000416690 SGIP1Q9BQI5 828 aa6.49□□□□□ -1.37
GTF3C3-203ENST00000416690 NUBP1P53384 320 aa6.48□□□□□ -1.37
GTF3C3-203ENST00000416690 COLQQ9Y215 455 aaPredicted RBP6.48□□□□□ -1.37
GTF3C3-203ENST00000416690 SEC24BO95487 1268 aa6.47□□□□□ -1.37
GTF3C3-203ENST00000416690 ZBTB47Q9UFB7 747 aaPredicted RBP6.47□□□□□ -1.37
GTF3C3-203ENST00000416690 PCDHB13Q9Y5F0 798 aa6.47□□□□□ -1.37
GTF3C3-203ENST00000416690 TRIM35Q9UPQ4 493 aa6.46□□□□□ -1.38
GTF3C3-203ENST00000416690 IER5LQ5T953 404 aa6.45□□□□□ -1.38
GTF3C3-203ENST00000416690 IFNL1Q8IU54 200 aa6.43□□□□□ -1.38
GTF3C3-203ENST00000416690 FAM212AQ96EL1 285 aa6.41□□□□□ -1.38
GTF3C3-203ENST00000416690 TMEM106CQ9BVX2 250 aa6.4□□□□□ -1.38
GTF3C3-203ENST00000416690 FKBP8Q14318 412 aa6.38□□□□□ -1.39
GTF3C3-203ENST00000416690 SLAIN1Q8ND83 568 aa6.37□□□□□ -1.39
GTF3C3-203ENST00000416690 PLCG2P16885 1265 aa6.36□□□□□ -1.39
GTF3C3-203ENST00000416690 IRX5P78411 483 aaPredicted RBP6.36□□□□□ -1.39
GTF3C3-203ENST00000416690 DCAF8Q5TAQ9 597 aa6.36□□□□□ -1.39
GTF3C3-203ENST00000416690 CDAN1Q8IWY9 1227 aa6.35□□□□□ -1.39
GTF3C3-203ENST00000416690 ST18O60284 1047 aa6.34□□□□□ -1.39
GTF3C3-203ENST00000416690 PYGBP11216 843 aa6.34□□□□□ -1.39
GTF3C3-203ENST00000416690 OCEL1Q9H607 264 aa6.33□□□□□ -1.4
GTF3C3-203ENST00000416690 PCDHB8Q9UN66 801 aa6.31□□□□□ -1.4
GTF3C3-203ENST00000416690 FBXO3Q9UK99 471 aa6.3□□□□□ -1.4
GTF3C3-203ENST00000416690 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.27□□□□□ -1.41
GTF3C3-203ENST00000416690 SNPHO15079 494 aa6.26□□□□□ -1.41
GTF3C3-203ENST00000416690 TMEM121BQ9BXQ6 578 aaPredicted RBP6.26□□□□□ -1.41
GTF3C3-203ENST00000416690 GSE1Q14687 1217 aa6.25□□□□□ -1.41
GTF3C3-203ENST00000416690 ZNF467Q7Z7K2 595 aaPredicted RBP6.25□□□□□ -1.41
GTF3C3-203ENST00000416690 KLHL34Q8N239 644 aa6.25□□□□□ -1.41
GTF3C3-203ENST00000416690 CHRM1P11229 460 aaPredicted RBP6.23□□□□□ -1.41
GTF3C3-203ENST00000416690 PDCD7Q8N8D1 485 aaKnown RBP6.23□□□□□ -1.41
GTF3C3-203ENST00000416690 VASPP50552 380 aaPredicted RBP6.22□□□□□ -1.41
GTF3C3-203ENST00000416690 GOLGA2Q08379 1002 aa6.22□□□□□ -1.41
GTF3C3-203ENST00000416690 MKRN3Q13064 507 aaKnown RBP6.22□□□□□ -1.41
GTF3C3-203ENST00000416690 MARVELD3Q96A59 401 aa6.21□□□□□ -1.42
GTF3C3-203ENST00000416690 L3MBTL3Q96JM7 780 aaPredicted RBP6.21□□□□□ -1.42
GTF3C3-203ENST00000416690 PSEN1P49768 467 aa6.2□□□□□ -1.42
GTF3C3-203ENST00000416690 MMRN1Q13201 1228 aa6.2□□□□□ -1.42
GTF3C3-203ENST00000416690 C3orf67Q6ZVT6 689 aa6.2□□□□□ -1.42
GTF3C3-203ENST00000416690 SPNS2Q8IVW8 549 aa6.2□□□□□ -1.42
GTF3C3-203ENST00000416690 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.19□□□□□ -1.426e-8■■□□□ 14.2
GTF3C3-203ENST00000416690 ILDR1Q86SU0 546 aaPredicted RBP6.17□□□□□ -1.42
GTF3C3-203ENST00000416690 EMP3P54852 163 aa6.15□□□□□ -1.42
GTF3C3-203ENST00000416690 PDAP1Q13442 181 aaKnown RBP6.15□□□□□ -1.42
GTF3C3-203ENST00000416690 DPY19L2Q6NUT2 758 aa6.15□□□□□ -1.42
GTF3C3-203ENST00000416690 POTEB3A0JP26 581 aa6.13□□□□□ -1.43
GTF3C3-203ENST00000416690 POTEBQ6S5H4 581 aa6.13□□□□□ -1.43
GTF3C3-203ENST00000416690 FAM205CA6NFA0 338 aa6.12□□□□□ -1.43
GTF3C3-203ENST00000416690 IFNLR1Q8IU57 520 aaPredicted RBP6.12□□□□□ -1.43
GTF3C3-203ENST00000416690 SPOCK2Q92563 424 aa6.12□□□□□ -1.43
GTF3C3-203ENST00000416690 HS3ST6Q96QI5 342 aa6.12□□□□□ -1.43
GTF3C3-203ENST00000416690 CABP2Q9NPB3 220 aa6.12□□□□□ -1.43
GTF3C3-203ENST00000416690 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
GTF3C3-203ENST00000416690 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
GTF3C3-203ENST00000416690 CIZ1Q9ULV3 898 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-203ENST00000416690 BOLA1Q9Y3E2 137 aa6.1□□□□□ -1.43
GTF3C3-203ENST00000416690 G3V3G9 751 aa6.09□□□□□ -1.43
GTF3C3-203ENST00000416690 HOXB3P14651 431 aaPredicted RBP6.08□□□□□ -1.44
GTF3C3-203ENST00000416690 HOXB1P14653 301 aaPredicted RBP6.05□□□□□ -1.44
GTF3C3-203ENST00000416690 DOK7Q18PE1 504 aa6.04□□□□□ -1.44
GTF3C3-203ENST00000416690 ZNF710Q8N1W2 664 aa6.04□□□□□ -1.44
GTF3C3-203ENST00000416690 EFCAB3Q8N7B9 438 aa6.04□□□□□ -1.44
GTF3C3-203ENST00000416690 TRIM41Q8WV44 630 aa6.02□□□□□ -1.45
GTF3C3-203ENST00000416690 ERBB3P21860 1342 aa6.01□□□□□ -1.45
GTF3C3-203ENST00000416690 RIMBP2O15034 1052 aa5.99□□□□□ -1.45
GTF3C3-203ENST00000416690 TMEM92Q6UXU6 159 aa5.99□□□□□ -1.45
GTF3C3-203ENST00000416690 MICALL2Q8IY33 904 aa5.98□□□□□ -1.45
GTF3C3-203ENST00000416690 SOX12O15370 315 aa5.97□□□□□ -1.45
GTF3C3-203ENST00000416690 VARS2Q5ST30 1063 aaKnown RBP5.97□□□□□ -1.45
GTF3C3-203ENST00000416690 ZSWIM6Q9HCJ5 1215 aa5.97□□□□□ -1.45
GTF3C3-203ENST00000416690 GPR153Q6NV75 609 aa5.95□□□□□ -1.46
GTF3C3-203ENST00000416690 ZNF687Q8N1G0 1237 aa5.95□□□□□ -1.46
GTF3C3-203ENST00000416690 MS4A4AQ96JQ5 239 aa5.95□□□□□ -1.46
GTF3C3-203ENST00000416690 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.94□□□□□ -1.46
GTF3C3-203ENST00000416690 RIOK3O14730 519 aaKnown RBP5.94□□□□□ -1.46
GTF3C3-203ENST00000416690 RNF166Q96A37 237 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms