RNA–Protein interactions for RNA: ENST00000416593.1

AC004012.1-201, humanhuman

TSL 4 BASIC

Gene AC004012.1, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004012.1-201ENST00000416593 ZBTB47Q9UFB7 747 aaPredicted RBP13.61□□□□□ -0.23
AC004012.1-201ENST00000416593 SPOCK2Q92563 424 aa13.59□□□□□ -0.23
AC004012.1-201ENST00000416593 NUBP1P53384 320 aa13.55□□□□□ -0.24
AC004012.1-201ENST00000416593 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
AC004012.1-201ENST00000416593 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
AC004012.1-201ENST00000416593 POTEHQ6S545 545 aa13.49□□□□□ -0.25
AC004012.1-201ENST00000416593 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.25
AC004012.1-201ENST00000416593 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
AC004012.1-201ENST00000416593 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
AC004012.1-201ENST00000416593 DNAJC5Q9H3Z4 198 aa13.39□□□□□ -0.27
AC004012.1-201ENST00000416593 CIZ1Q9ULV3 898 aaPredicted RBP13.39□□□□□ -0.27
AC004012.1-201ENST00000416593 C19orf67A6NJJ6 358 aa13.38□□□□□ -0.27
AC004012.1-201ENST00000416593 FAM212AQ96EL1 285 aa13.38□□□□□ -0.27
AC004012.1-201ENST00000416593 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
AC004012.1-201ENST00000416593 PKD2Q13563 968 aa13.37□□□□□ -0.27
AC004012.1-201ENST00000416593 DCAF8Q5TAQ9 597 aa13.37□□□□□ -0.27
AC004012.1-201ENST00000416593 HAX1O00165 279 aa13.33□□□□□ -0.28
AC004012.1-201ENST00000416593 GSE1Q14687 1217 aa13.33□□□□□ -0.28
AC004012.1-201ENST00000416593 EVX2Q03828 476 aa13.31□□□□□ -0.28
AC004012.1-201ENST00000416593 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
AC004012.1-201ENST00000416593 CUX2O14529 1486 aa13.29□□□□□ -0.28
AC004012.1-201ENST00000416593 CCDC61Q9Y6R9 512 aa13.29□□□□□ -0.28
AC004012.1-201ENST00000416593 PAK3O75914 559 aaPredicted RBP13.28□□□□□ -0.28
AC004012.1-201ENST00000416593 NCAPD3P42695 1498 aa13.28□□□□□ -0.28
AC004012.1-201ENST00000416593 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
AC004012.1-201ENST00000416593 PYGBP11216 843 aa13.24□□□□□ -0.29
AC004012.1-201ENST00000416593 PHF12Q96QT6 1004 aa13.22□□□□□ -0.29
AC004012.1-201ENST00000416593 ERCC6Q03468 1493 aa13.22□□□□□ -0.29
AC004012.1-201ENST00000416593 HMGXB3Q12766 1538 aa13.2□□□□□ -0.3
AC004012.1-201ENST00000416593 ATAD2BQ9ULI0 1458 aa13.2□□□□□ -0.3
AC004012.1-201ENST00000416593 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
AC004012.1-201ENST00000416593 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
AC004012.1-201ENST00000416593 SMARCA4P51532 1647 aa13.18□□□□□ -0.3
AC004012.1-201ENST00000416593 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
AC004012.1-201ENST00000416593 RGL2O15211 777 aa13.16□□□□□ -0.3
AC004012.1-201ENST00000416593 CHRM1P11229 460 aaPredicted RBP13.15□□□□□ -0.3
AC004012.1-201ENST00000416593 KIF12Q96FN5 646 aa13.15□□□□□ -0.3
AC004012.1-201ENST00000416593 RNF25Q96BH1 459 aaPredicted RBP13.14□□□□□ -0.31
AC004012.1-201ENST00000416593 MAP3K13O43283 966 aa13.12□□□□□ -0.31
AC004012.1-201ENST00000416593 BAZ1AQ9NRL2 1556 aaPredicted RBP13.09□□□□□ -0.31
AC004012.1-201ENST00000416593 PEG3Q9GZU2 1588 aa13.07□□□□□ -0.32
AC004012.1-201ENST00000416593 NESP48681 1621 aa13.07□□□□□ -0.32
AC004012.1-201ENST00000416593 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
AC004012.1-201ENST00000416593 BAZ1BQ9UIG0 1483 aaKnown RBP13.07□□□□□ -0.32
AC004012.1-201ENST00000416593 MS4A3Q96HJ5 214 aa13.06□□□□□ -0.32
AC004012.1-201ENST00000416593 PCDHB8Q9UN66 801 aa13.06□□□□□ -0.32
AC004012.1-201ENST00000416593 IFNL1Q8IU54 200 aa13.05□□□□□ -0.32
AC004012.1-201ENST00000416593 THOC2Q8NI27 1593 aaKnown RBP13.04□□□□□ -0.32
AC004012.1-201ENST00000416593 RIOK3O14730 519 aaKnown RBP13.03□□□□□ -0.32
AC004012.1-201ENST00000416593 GALR2O43603 387 aaPredicted RBP13.03□□□□□ -0.32
AC004012.1-201ENST00000416593 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
AC004012.1-201ENST00000416593 SGIP1Q9BQI5 828 aa13.01□□□□□ -0.33
AC004012.1-201ENST00000416593 SP7Q8TDD2 431 aaPredicted RBP13□□□□□ -0.33
AC004012.1-201ENST00000416593 TRPC6Q9Y210 931 aa13□□□□□ -0.33
AC004012.1-201ENST00000416593 GABBR2O75899 941 aa12.99□□□□□ -0.33
AC004012.1-201ENST00000416593 ZNF467Q7Z7K2 595 aaPredicted RBP12.99□□□□□ -0.33
AC004012.1-201ENST00000416593 KIF21AQ7Z4S6 1674 aa12.96□□□□□ -0.33
AC004012.1-201ENST00000416593 MROH2BQ7Z745 1585 aa12.94□□□□□ -0.34
AC004012.1-201ENST00000416593 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
AC004012.1-201ENST00000416593 CLCN6P51797 869 aa12.92□□□□□ -0.34
AC004012.1-201ENST00000416593 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
AC004012.1-201ENST00000416593 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
AC004012.1-201ENST00000416593 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
AC004012.1-201ENST00000416593 PSEN1P49768 467 aa12.9□□□□□ -0.34
AC004012.1-201ENST00000416593 PDAP1Q13442 181 aaKnown RBP12.9□□□□□ -0.34
AC004012.1-201ENST00000416593 CHGAP10645 457 aaKnown RBP12.86□□□□□ -0.35
AC004012.1-201ENST00000416593 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
AC004012.1-201ENST00000416593 TAOK2Q9UL54 1235 aa12.85□□□□□ -0.35
AC004012.1-201ENST00000416593 STK25O00506 426 aa12.84□□□□□ -0.35
AC004012.1-201ENST00000416593 TMEM106CQ9BVX2 250 aa12.84□□□□□ -0.35
AC004012.1-201ENST00000416593 CADPSQ9ULU8 1353 aa12.83□□□□□ -0.36
AC004012.1-201ENST00000416593 TIE1P35590 1138 aa12.83□□□□□ -0.36
AC004012.1-201ENST00000416593 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
AC004012.1-201ENST00000416593 MRC2Q9UBG0 1479 aa12.83□□□□□ -0.36
AC004012.1-201ENST00000416593 WDR62O43379 1518 aa12.83□□□□□ -0.36
AC004012.1-201ENST00000416593 TTLL13PA6NNM8 815 aa12.82□□□□□ -0.36
AC004012.1-201ENST00000416593 HS6ST3Q8IZP7 471 aa12.82□□□□□ -0.36
AC004012.1-201ENST00000416593 STK24Q9Y6E0 443 aa12.81□□□□□ -0.36
AC004012.1-201ENST00000416593 WIZO95785 1651 aa12.79□□□□□ -0.36
AC004012.1-201ENST00000416593 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
AC004012.1-201ENST00000416593 POTEIP0CG38 1075 aa12.77□□□□□ -0.37
AC004012.1-201ENST00000416593 ATN1P54259 1190 aaPredicted RBP12.77□□□□□ -0.37
AC004012.1-201ENST00000416593 ASTLQ6HA08 431 aaPredicted RBP12.76□□□□□ -0.37
AC004012.1-201ENST00000416593 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
AC004012.1-201ENST00000416593 DCBLD2Q96PD2 775 aa12.75□□□□□ -0.37
AC004012.1-201ENST00000416593 CEP164Q9UPV0 1460 aa12.74□□□□□ -0.37
AC004012.1-201ENST00000416593 TRIM35Q9UPQ4 493 aa12.73□□□□□ -0.37
AC004012.1-201ENST00000416593 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
AC004012.1-201ENST00000416593 NKX1-1Q15270 411 aaPredicted RBP12.7□□□□□ -0.38
AC004012.1-201ENST00000416593 EFCAB3Q8N7B9 438 aa12.7□□□□□ -0.38
AC004012.1-201ENST00000416593 FANCD2Q9BXW9 1451 aa12.7□□□□□ -0.38
AC004012.1-201ENST00000416593 CFTRP13569 1480 aa12.68□□□□□ -0.38
AC004012.1-201ENST00000416593 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
AC004012.1-201ENST00000416593 GOLGA2Q08379 1002 aa12.65□□□□□ -0.38
AC004012.1-201ENST00000416593 PRDM2Q13029 1718 aa12.65□□□□□ -0.38
AC004012.1-201ENST00000416593 TOP2AP11388 1531 aaKnown RBP12.64□□□□□ -0.39
AC004012.1-201ENST00000416593 MKRN3Q13064 507 aaKnown RBP12.62□□□□□ -0.39
AC004012.1-201ENST00000416593 MFRPQ9BY79 579 aa12.61□□□□□ -0.39
AC004012.1-201ENST00000416593 PHF8Q9UPP1 1060 aa12.61□□□□□ -0.39
AC004012.1-201ENST00000416593 URB2Q14146 1524 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms