RNA–Protein interactions for RNA: ENST00000416078.1

NCLP2-201, Transcript of nucleolin pseudogene 2, humanhuman

BASIC

Gene NCLP2, Length 1,462 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP2-201ENST00000416078 SCUBE2Q9NQ36 999 aa12.97□□□□□ -0.33
NCLP2-201ENST00000416078 SLC39A7Q92504 469 aa12.95□□□□□ -0.34
NCLP2-201ENST00000416078 METRNQ9UJH8 293 aa12.93□□□□□ -0.34
NCLP2-201ENST00000416078 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
NCLP2-201ENST00000416078 POTEJP0CG39 1038 aa12.9□□□□□ -0.34
NCLP2-201ENST00000416078 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
NCLP2-201ENST00000416078 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
NCLP2-201ENST00000416078 PAK3O75914 559 aaPredicted RBP12.86□□□□□ -0.35
NCLP2-201ENST00000416078 ASTLQ6HA08 431 aaPredicted RBP12.83□□□□□ -0.36
NCLP2-201ENST00000416078 MMRN1Q13201 1228 aa12.8□□□□□ -0.36
NCLP2-201ENST00000416078 MNX1P50219 401 aaPredicted RBP12.76□□□□□ -0.37
NCLP2-201ENST00000416078 ATMINO43313 823 aaPredicted RBP12.73□□□□□ -0.37
NCLP2-201ENST00000416078 PHF12Q96QT6 1004 aa12.72□□□□□ -0.37
NCLP2-201ENST00000416078 VASPP50552 380 aaPredicted RBP12.71□□□□□ -0.38
NCLP2-201ENST00000416078 SPNS2Q8IVW8 549 aa12.7□□□□□ -0.38
NCLP2-201ENST00000416078 MIER1Q8N108 512 aa12.7□□□□□ -0.38
NCLP2-201ENST00000416078 PLEKHG5O94827 1062 aa12.67□□□□□ -0.38
NCLP2-201ENST00000416078 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
NCLP2-201ENST00000416078 NPM1P06748 294 aaKnown RBP eCLIP12.63□□□□□ -0.39
NCLP2-201ENST00000416078 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
NCLP2-201ENST00000416078 MS4A3Q96HJ5 214 aa12.54□□□□□ -0.4
NCLP2-201ENST00000416078 ST18O60284 1047 aa12.51□□□□□ -0.41
NCLP2-201ENST00000416078 IFNLR1Q8IU57 520 aaPredicted RBP12.5□□□□□ -0.41
NCLP2-201ENST00000416078 NUBP1P53384 320 aa12.49□□□□□ -0.41
NCLP2-201ENST00000416078 ATN1P54259 1190 aaPredicted RBP12.47□□□□□ -0.41
NCLP2-201ENST00000416078 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
NCLP2-201ENST00000416078 POTEFA5A3E0 1075 aa12.44□□□□□ -0.42
NCLP2-201ENST00000416078 KLHL34Q8N239 644 aa12.43□□□□□ -0.42
NCLP2-201ENST00000416078 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
NCLP2-201ENST00000416078 SPOCK2Q92563 424 aa12.39□□□□□ -0.43
NCLP2-201ENST00000416078 CCDC61Q9Y6R9 512 aa12.38□□□□□ -0.43
NCLP2-201ENST00000416078 FAM212AQ96EL1 285 aa12.36□□□□□ -0.43
NCLP2-201ENST00000416078 TSPYL2Q9H2G4 693 aaPredicted RBP12.36□□□□□ -0.43
NCLP2-201ENST00000416078 SEC24BO95487 1268 aa12.34□□□□□ -0.43
NCLP2-201ENST00000416078 SLAIN1Q8ND83 568 aa12.33□□□□□ -0.44
NCLP2-201ENST00000416078 GSE1Q14687 1217 aa12.28□□□□□ -0.44
NCLP2-201ENST00000416078 BMP2KQ9NSY1 1161 aaPredicted RBP12.27□□□□□ -0.44
NCLP2-201ENST00000416078 TIE1P35590 1138 aa12.27□□□□□ -0.45
NCLP2-201ENST00000416078 SNPHO15079 494 aa12.26□□□□□ -0.45
NCLP2-201ENST00000416078 DCAF8Q5TAQ9 597 aa12.25□□□□□ -0.45
NCLP2-201ENST00000416078 KIF12Q96FN5 646 aa12.25□□□□□ -0.45
NCLP2-201ENST00000416078 COLQQ9Y215 455 aaPredicted RBP12.23□□□□□ -0.45
NCLP2-201ENST00000416078 IER5LQ5T953 404 aa12.22□□□□□ -0.45
NCLP2-201ENST00000416078 SGIP1Q9BQI5 828 aa12.21□□□□□ -0.46
NCLP2-201ENST00000416078 CHRM1P11229 460 aaPredicted RBP12.18□□□□□ -0.46
NCLP2-201ENST00000416078 MAP3K13O43283 966 aa12.17□□□□□ -0.46
NCLP2-201ENST00000416078 TRIM41Q8WV44 630 aa12.15□□□□□ -0.46
NCLP2-201ENST00000416078 CIZ1Q9ULV3 898 aaPredicted RBP12.14□□□□□ -0.47
NCLP2-201ENST00000416078 PYGBP11216 843 aa12.14□□□□□ -0.47
NCLP2-201ENST00000416078 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
NCLP2-201ENST00000416078 IFNL1Q8IU54 200 aa12.08□□□□□ -0.48
NCLP2-201ENST00000416078 MARVELD3Q96A59 401 aa12.08□□□□□ -0.48
NCLP2-201ENST00000416078 TTLL13PA6NNM8 815 aa12.07□□□□□ -0.48
NCLP2-201ENST00000416078 ZNF467Q7Z7K2 595 aaPredicted RBP12.04□□□□□ -0.48
NCLP2-201ENST00000416078 KRTAP3-3Q9BYR6 98 aa12.04□□□□□ -0.48
NCLP2-201ENST00000416078 KRTAP3-2Q9BYR7 98 aa12.04□□□□□ -0.48
NCLP2-201ENST00000416078 TRPC6Q9Y210 931 aa12.04□□□□□ -0.48
NCLP2-201ENST00000416078 PKD2Q13563 968 aa12.03□□□□□ -0.48
NCLP2-201ENST00000416078 EMP3P54852 163 aa11.99□□□□□ -0.49
NCLP2-201ENST00000416078 PCDHB8Q9UN66 801 aa11.99□□□□□ -0.49
NCLP2-201ENST00000416078 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
NCLP2-201ENST00000416078 PLCG2P16885 1265 aa11.95□□□□□ -0.5
NCLP2-201ENST00000416078 RNF25Q96BH1 459 aaPredicted RBP11.95□□□□□ -0.5
NCLP2-201ENST00000416078 ECM2O94769 699 aaPredicted RBP11.95□□□□□ -0.5
NCLP2-201ENST00000416078 HS3ST6Q96QI5 342 aa11.93□□□□□ -0.5
NCLP2-201ENST00000416078 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.92□□□□□ -0.5
NCLP2-201ENST00000416078 RIOK3O14730 519 aaKnown RBP11.91□□□□□ -0.5
NCLP2-201ENST00000416078 PDAP1Q13442 181 aaKnown RBP11.91□□□□□ -0.5
NCLP2-201ENST00000416078 TMEM106CQ9BVX2 250 aa11.9□□□□□ -0.5
NCLP2-201ENST00000416078 RNF166Q96A37 237 aaPredicted RBP11.89□□□□□ -0.51
NCLP2-201ENST00000416078 PSEN1P49768 467 aa11.89□□□□□ -0.51
NCLP2-201ENST00000416078 VGFO15240 615 aaPredicted RBP11.86□□□□□ -0.51
NCLP2-201ENST00000416078 RGL2O15211 777 aa11.85□□□□□ -0.51
NCLP2-201ENST00000416078 FAM205CA6NFA0 338 aa11.84□□□□□ -0.51
NCLP2-201ENST00000416078 POTEB3A0JP26 581 aa11.83□□□□□ -0.52
NCLP2-201ENST00000416078 POTEBQ6S5H4 581 aa11.83□□□□□ -0.52
NCLP2-201ENST00000416078 TAOK2Q9UL54 1235 aa11.82□□□□□ -0.52
NCLP2-201ENST00000416078 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
NCLP2-201ENST00000416078 IRX5P78411 483 aaPredicted RBP11.8□□□□□ -0.52
NCLP2-201ENST00000416078 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.78□□□□□ -0.52
NCLP2-201ENST00000416078 ZFP91Q96JP5 570 aaPredicted RBP11.78□□□□□ -0.52
NCLP2-201ENST00000416078 OCEL1Q9H607 264 aa11.76□□□□□ -0.53
NCLP2-201ENST00000416078 MYT1LQ9UL68 1186 aa11.73□□□□□ -0.53
NCLP2-201ENST00000416078 CABP2Q9NPB3 220 aa11.72□□□□□ -0.53
NCLP2-201ENST00000416078 RTN4Q9NQC3 1192 aaKnown RBP11.72□□□□□ -0.53
NCLP2-201ENST00000416078 ILDR1Q86SU0 546 aaPredicted RBP11.7□□□□□ -0.54
NCLP2-201ENST00000416078 GOLGA2Q08379 1002 aa11.7□□□□□ -0.54
NCLP2-201ENST00000416078 MKRN3Q13064 507 aaKnown RBP11.7□□□□□ -0.54
NCLP2-201ENST00000416078 BCL11BQ9C0K0 894 aaPredicted RBP11.69□□□□□ -0.54
NCLP2-201ENST00000416078 STK25O00506 426 aa11.66□□□□□ -0.54
NCLP2-201ENST00000416078 PTGER2P43116 358 aa11.66□□□□□ -0.54
NCLP2-201ENST00000416078 HS6ST3Q8IZP7 471 aa11.66□□□□□ -0.54
NCLP2-201ENST00000416078 EFCAB3Q8N7B9 438 aa11.65□□□□□ -0.54
NCLP2-201ENST00000416078 PDCD7Q8N8D1 485 aaKnown RBP11.64□□□□□ -0.55
NCLP2-201ENST00000416078 STK24Q9Y6E0 443 aa11.64□□□□□ -0.55
NCLP2-201ENST00000416078 SOX12O15370 315 aa11.62□□□□□ -0.55
NCLP2-201ENST00000416078 C3orf67Q6ZVT6 689 aa11.62□□□□□ -0.55
NCLP2-201ENST00000416078 DNAJC5Q9H3Z4 198 aa11.62□□□□□ -0.55
NCLP2-201ENST00000416078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.61□□□□□ -0.55
NCLP2-201ENST00000416078 NISCHQ9Y2I1 1504 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms