RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 PELP1Q8IZL8 1130 aaKnown RBP8.03□□□□□ -1.12
LINC01048-201ENST00000414480 SLC39A7Q92504 469 aa8.02□□□□□ -1.13
LINC01048-201ENST00000414480 METRNQ9UJH8 293 aa8.02□□□□□ -1.13
LINC01048-201ENST00000414480 ATMINO43313 823 aaPredicted RBP8□□□□□ -1.13
LINC01048-201ENST00000414480 C7P10643 843 aa8□□□□□ -1.13
LINC01048-201ENST00000414480 TSPYL2Q9H2G4 693 aaPredicted RBP7.99□□□□□ -1.13
LINC01048-201ENST00000414480 CCDC61Q9Y6R9 512 aa7.97□□□□□ -1.13
LINC01048-201ENST00000414480 POTEMA6NI47 508 aa7.96□□□□□ -1.14
LINC01048-201ENST00000414480 PLEKHG5O94827 1062 aa7.96□□□□□ -1.14
LINC01048-201ENST00000414480 MAMSTRQ6ZN01 415 aa7.95□□□□□ -1.14
LINC01048-201ENST00000414480 POTEGQ6S5H5 508 aa7.93□□□□□ -1.14
LINC01048-201ENST00000414480 KIF12Q96FN5 646 aa7.93□□□□□ -1.14
LINC01048-201ENST00000414480 ATN1P54259 1190 aaPredicted RBP7.92□□□□□ -1.14
LINC01048-201ENST00000414480 SCUBE2Q9NQ36 999 aa7.91□□□□□ -1.14
LINC01048-201ENST00000414480 POTEJP0CG39 1038 aa7.9□□□□□ -1.14
LINC01048-201ENST00000414480 BMP2KQ9NSY1 1161 aaPredicted RBP7.89□□□□□ -1.15
LINC01048-201ENST00000414480 TIE1P35590 1138 aa7.88□□□□□ -1.15
LINC01048-201ENST00000414480 MIER1Q8N108 512 aa7.88□□□□□ -1.15
LINC01048-201ENST00000414480 PCDH10Q9P2E7 1040 aa7.88□□□□□ -1.15
LINC01048-201ENST00000414480 MAP3K13O43283 966 aa7.87□□□□□ -1.15
LINC01048-201ENST00000414480 RASEFQ8IZ41 740 aa7.86□□□□□ -1.15
LINC01048-201ENST00000414480 TRPC6Q9Y210 931 aa7.85□□□□□ -1.15
LINC01048-201ENST00000414480 POTEFA5A3E0 1075 aa7.83□□□□□ -1.16
LINC01048-201ENST00000414480 PLCD3Q8N3E9 789 aa7.83□□□□□ -1.16
LINC01048-201ENST00000414480 SGIP1Q9BQI5 828 aa7.82□□□□□ -1.16
LINC01048-201ENST00000414480 ZBTB47Q9UFB7 747 aaPredicted RBP7.82□□□□□ -1.16
LINC01048-201ENST00000414480 TTLL13PA6NNM8 815 aa7.81□□□□□ -1.16
LINC01048-201ENST00000414480 SEC24BO95487 1268 aa7.8□□□□□ -1.16
LINC01048-201ENST00000414480 LCE2DQ5TA82 110 aaPredicted RBP7.8□□□□□ -1.16
LINC01048-201ENST00000414480 FAM163AQ96GL9 167 aaPredicted RBP7.8□□□□□ -1.16
LINC01048-201ENST00000414480 IER5LQ5T953 404 aa7.79□□□□□ -1.16
LINC01048-201ENST00000414480 PCDHB13Q9Y5F0 798 aa7.78□□□□□ -1.16
LINC01048-201ENST00000414480 TRIM35Q9UPQ4 493 aa7.77□□□□□ -1.17
LINC01048-201ENST00000414480 COLQQ9Y215 455 aaPredicted RBP7.77□□□□□ -1.17
LINC01048-201ENST00000414480 NUBP1P53384 320 aa7.75□□□□□ -1.17
LINC01048-201ENST00000414480 FAM212AQ96EL1 285 aa7.74□□□□□ -1.17
LINC01048-201ENST00000414480 DNAJC5Q9H3Z4 198 aa7.73□□□□□ -1.17
LINC01048-201ENST00000414480 IFNL1Q8IU54 200 aa7.71□□□□□ -1.18
LINC01048-201ENST00000414480 TMEM106CQ9BVX2 250 aa7.7□□□□□ -1.18
LINC01048-201ENST00000414480 PLCG2P16885 1265 aa7.68□□□□□ -1.18
LINC01048-201ENST00000414480 SLAIN1Q8ND83 568 aa7.67□□□□□ -1.18
LINC01048-201ENST00000414480 CCDC180Q9P1Z9 1646 aa7.67□□□□□ -1.18
LINC01048-201ENST00000414480 FKBP8Q14318 412 aa7.65□□□□□ -1.18
LINC01048-201ENST00000414480 IRX5P78411 483 aaPredicted RBP7.64□□□□□ -1.19
LINC01048-201ENST00000414480 CDAN1Q8IWY9 1227 aa7.64□□□□□ -1.19
LINC01048-201ENST00000414480 ST18O60284 1047 aa7.61□□□□□ -1.19
LINC01048-201ENST00000414480 SLC24A1O60721 1099 aa7.61□□□□□ -1.19
LINC01048-201ENST00000414480 DCAF8Q5TAQ9 597 aa7.61□□□□□ -1.19
LINC01048-201ENST00000414480 OCEL1Q9H607 264 aa7.61□□□□□ -1.19
LINC01048-201ENST00000414480 PYGBP11216 843 aa7.6□□□□□ -1.19
LINC01048-201ENST00000414480 FBXO3Q9UK99 471 aa7.59□□□□□ -1.19
LINC01048-201ENST00000414480 TMEM121BQ9BXQ6 578 aaPredicted RBP7.57□□□□□ -1.2
LINC01048-201ENST00000414480 SNPHO15079 494 aa7.56□□□□□ -1.2
LINC01048-201ENST00000414480 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.56□□□□□ -1.2
LINC01048-201ENST00000414480 PCDHB8Q9UN66 801 aa7.55□□□□□ -1.2
LINC01048-201ENST00000414480 GSE1Q14687 1217 aa7.53□□□□□ -1.2
LINC01048-201ENST00000414480 ZNF467Q7Z7K2 595 aaPredicted RBP7.53□□□□□ -1.2
LINC01048-201ENST00000414480 GOLGA2Q08379 1002 aa7.51□□□□□ -1.21
LINC01048-201ENST00000414480 RB1CC1Q8TDY2 1594 aa7.5□□□□□ -1.21
LINC01048-201ENST00000414480 MKRN3Q13064 507 aaKnown RBP7.5□□□□□ -1.21
LINC01048-201ENST00000414480 C3orf67Q6ZVT6 689 aa7.5□□□□□ -1.21
LINC01048-201ENST00000414480 KLHL34Q8N239 644 aa7.49□□□□□ -1.21
LINC01048-201ENST00000414480 PDCD7Q8N8D1 485 aaKnown RBP7.49□□□□□ -1.21
LINC01048-201ENST00000414480 VASPP50552 380 aaPredicted RBP7.48□□□□□ -1.21
LINC01048-201ENST00000414480 L3MBTL3Q96JM7 780 aaPredicted RBP7.48□□□□□ -1.21
LINC01048-201ENST00000414480 CHRM1P11229 460 aaPredicted RBP7.47□□□□□ -1.21
LINC01048-201ENST00000414480 MMRN1Q13201 1228 aa7.46□□□□□ -1.22
LINC01048-201ENST00000414480 SPNS2Q8IVW8 549 aa7.46□□□□□ -1.22
LINC01048-201ENST00000414480 MARVELD3Q96A59 401 aa7.46□□□□□ -1.22
LINC01048-201ENST00000414480 PSEN1P49768 467 aa7.44□□□□□ -1.22
LINC01048-201ENST00000414480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.44□□□□□ -1.22
LINC01048-201ENST00000414480 EMP3P54852 163 aa7.42□□□□□ -1.22
LINC01048-201ENST00000414480 PDAP1Q13442 181 aaKnown RBP7.4□□□□□ -1.22
LINC01048-201ENST00000414480 ILDR1Q86SU0 546 aaPredicted RBP7.4□□□□□ -1.22
LINC01048-201ENST00000414480 BICRAQ9NZM4 1560 aa7.39□□□□□ -1.23
LINC01048-201ENST00000414480 NACADO15069 1562 aa7.38□□□□□ -1.23
LINC01048-201ENST00000414480 CECR2Q9BXF3 1484 aa7.37□□□□□ -1.23
LINC01048-201ENST00000414480 G3V3G9 751 aa7.37□□□□□ -1.23
LINC01048-201ENST00000414480 HS3ST6Q96QI5 342 aa7.37□□□□□ -1.23
LINC01048-201ENST00000414480 FAM205CA6NFA0 338 aa7.36□□□□□ -1.23
LINC01048-201ENST00000414480 SPOCK2Q92563 424 aa7.35□□□□□ -1.23
LINC01048-201ENST00000414480 CABP2Q9NPB3 220 aa7.35□□□□□ -1.23
LINC01048-201ENST00000414480 BOLA1Q9Y3E2 137 aa7.35□□□□□ -1.23
LINC01048-201ENST00000414480 KRTAP3-3Q9BYR6 98 aa7.34□□□□□ -1.23
LINC01048-201ENST00000414480 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
LINC01048-201ENST00000414480 UNC13AQ9UPW8 1703 aa7.34□□□□□ -1.23
LINC01048-201ENST00000414480 DPY19L2Q6NUT2 758 aa7.33□□□□□ -1.24
LINC01048-201ENST00000414480 CIZ1Q9ULV3 898 aaPredicted RBP7.33□□□□□ -1.24
LINC01048-201ENST00000414480 CC2D2AQ9P2K1 1620 aa7.32□□□□□ -1.24
LINC01048-201ENST00000414480 POTEB3A0JP26 581 aa7.32□□□□□ -1.24
LINC01048-201ENST00000414480 POTEBQ6S5H4 581 aa7.32□□□□□ -1.24
LINC01048-201ENST00000414480 HOXB3P14651 431 aaPredicted RBP7.3□□□□□ -1.24
LINC01048-201ENST00000414480 IFNLR1Q8IU57 520 aaPredicted RBP7.3□□□□□ -1.24
LINC01048-201ENST00000414480 DOK7Q18PE1 504 aa7.29□□□□□ -1.24
LINC01048-201ENST00000414480 ZNF710Q8N1W2 664 aa7.29□□□□□ -1.24
LINC01048-201ENST00000414480 HOXB1P14653 301 aaPredicted RBP7.28□□□□□ -1.24
LINC01048-201ENST00000414480 TRIM41Q8WV44 630 aa7.28□□□□□ -1.24
LINC01048-201ENST00000414480 RIMBP2O15034 1052 aa7.26□□□□□ -1.25
LINC01048-201ENST00000414480 ERBB3P21860 1342 aa7.25□□□□□ -1.25
LINC01048-201ENST00000414480 EFCAB3Q8N7B9 438 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms