RNA–Protein interactions for RNA: ENST00000412993.2

PGBD4P8-201, Transcript of piggyBac transposable element derived 4 pseudogene 8, humanhuman

BASIC

Gene PGBD4P8, Length 562 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P8-201ENST00000412993 CCDC61Q9Y6R9 512 aa12.24□□□□□ -0.45
PGBD4P8-201ENST00000412993 FAM212AQ96EL1 285 aa12.23□□□□□ -0.45
PGBD4P8-201ENST00000412993 PHF12Q96QT6 1004 aa12.22□□□□□ -0.45
PGBD4P8-201ENST00000412993 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
PGBD4P8-201ENST00000412993 GALR2O43603 387 aaPredicted RBP12.12□□□□□ -0.47
PGBD4P8-201ENST00000412993 KIF12Q96FN5 646 aa12.12□□□□□ -0.47
PGBD4P8-201ENST00000412993 GSE1Q14687 1217 aa12.11□□□□□ -0.47
PGBD4P8-201ENST00000412993 DCAF8Q5TAQ9 597 aa12.1□□□□□ -0.47
PGBD4P8-201ENST00000412993 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
PGBD4P8-201ENST00000412993 SGIP1Q9BQI5 828 aa12.06□□□□□ -0.48
PGBD4P8-201ENST00000412993 MAP3K13O43283 966 aa12.05□□□□□ -0.48
PGBD4P8-201ENST00000412993 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
PGBD4P8-201ENST00000412993 POTEIP0CG38 1075 aa12□□□□□ -0.49
PGBD4P8-201ENST00000412993 PCDHB13Q9Y5F0 798 aa12□□□□□ -0.49
PGBD4P8-201ENST00000412993 PYGBP11216 843 aa11.99□□□□□ -0.49
PGBD4P8-201ENST00000412993 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
PGBD4P8-201ENST00000412993 CHRM1P11229 460 aaPredicted RBP11.97□□□□□ -0.49
PGBD4P8-201ENST00000412993 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
PGBD4P8-201ENST00000412993 TIE1P35590 1138 aa11.94□□□□□ -0.5
PGBD4P8-201ENST00000412993 ASTLQ6HA08 431 aaPredicted RBP11.94□□□□□ -0.5
PGBD4P8-201ENST00000412993 IFNL1Q8IU54 200 aa11.94□□□□□ -0.5
PGBD4P8-201ENST00000412993 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
PGBD4P8-201ENST00000412993 ATMINO43313 823 aaPredicted RBP11.9□□□□□ -0.5
PGBD4P8-201ENST00000412993 ZNF467Q7Z7K2 595 aaPredicted RBP11.9□□□□□ -0.5
PGBD4P8-201ENST00000412993 BMP2KQ9NSY1 1161 aaPredicted RBP11.9□□□□□ -0.5
PGBD4P8-201ENST00000412993 TTLL13PA6NNM8 815 aa11.85□□□□□ -0.51
PGBD4P8-201ENST00000412993 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
PGBD4P8-201ENST00000412993 PCDHB8Q9UN66 801 aa11.84□□□□□ -0.51
PGBD4P8-201ENST00000412993 PELP1Q8IZL8 1130 aaKnown RBP11.82□□□□□ -0.52
PGBD4P8-201ENST00000412993 SLC39A7Q92504 469 aa11.81□□□□□ -0.52
PGBD4P8-201ENST00000412993 TMEM106CQ9BVX2 250 aa11.8□□□□□ -0.52
PGBD4P8-201ENST00000412993 C7P10643 843 aa11.77□□□□□ -0.53
PGBD4P8-201ENST00000412993 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
PGBD4P8-201ENST00000412993 TRIM35Q9UPQ4 493 aa11.77□□□□□ -0.53
PGBD4P8-201ENST00000412993 PDAP1Q13442 181 aaKnown RBP11.76□□□□□ -0.53
PGBD4P8-201ENST00000412993 PSEN1P49768 467 aa11.74□□□□□ -0.53
PGBD4P8-201ENST00000412993 PKD2Q13563 968 aa11.74□□□□□ -0.53
PGBD4P8-201ENST00000412993 IER5LQ5T953 404 aa11.74□□□□□ -0.53
PGBD4P8-201ENST00000412993 RNF25Q96BH1 459 aaPredicted RBP11.73□□□□□ -0.53
PGBD4P8-201ENST00000412993 RIOK3O14730 519 aaKnown RBP11.72□□□□□ -0.53
PGBD4P8-201ENST00000412993 ECM2O94769 699 aaPredicted RBP11.72□□□□□ -0.53
PGBD4P8-201ENST00000412993 LHX8Q68G74 356 aa11.71□□□□□ -0.53
PGBD4P8-201ENST00000412993 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
PGBD4P8-201ENST00000412993 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
PGBD4P8-201ENST00000412993 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
PGBD4P8-201ENST00000412993 GOLGA2Q08379 1002 aa11.63□□□□□ -0.55
PGBD4P8-201ENST00000412993 SEC24BO95487 1268 aa11.62□□□□□ -0.55
PGBD4P8-201ENST00000412993 POTEB2H3BUK9 544 aa11.61□□□□□ -0.55
PGBD4P8-201ENST00000412993 IRX5P78411 483 aaPredicted RBP11.61□□□□□ -0.55
PGBD4P8-201ENST00000412993 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
PGBD4P8-201ENST00000412993 RGL2O15211 777 aa11.6□□□□□ -0.55
PGBD4P8-201ENST00000412993 MKRN3Q13064 507 aaKnown RBP11.6□□□□□ -0.55
PGBD4P8-201ENST00000412993 ZFP91Q96JP5 570 aaPredicted RBP11.6□□□□□ -0.55
PGBD4P8-201ENST00000412993 COLQQ9Y215 455 aaPredicted RBP11.6□□□□□ -0.55
PGBD4P8-201ENST00000412993 PLCG2P16885 1265 aa11.59□□□□□ -0.55
PGBD4P8-201ENST00000412993 CABP2Q9NPB3 220 aa11.59□□□□□ -0.55
PGBD4P8-201ENST00000412993 OCEL1Q9H607 264 aa11.57□□□□□ -0.56
PGBD4P8-201ENST00000412993 ILDR1Q86SU0 546 aaPredicted RBP11.53□□□□□ -0.56
PGBD4P8-201ENST00000412993 MAMSTRQ6ZN01 415 aa11.52□□□□□ -0.57
PGBD4P8-201ENST00000412993 PDCD7Q8N8D1 485 aaKnown RBP11.52□□□□□ -0.57
PGBD4P8-201ENST00000412993 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
PGBD4P8-201ENST00000412993 BCL11BQ9C0K0 894 aaPredicted RBP11.51□□□□□ -0.57
PGBD4P8-201ENST00000412993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.51□□□□□ -0.57
PGBD4P8-201ENST00000412993 OTUD5Q96G74 571 aa11.5□□□□□ -0.57
PGBD4P8-201ENST00000412993 STK25O00506 426 aa11.49□□□□□ -0.57
PGBD4P8-201ENST00000412993 EFCAB3Q8N7B9 438 aa11.49□□□□□ -0.57
PGBD4P8-201ENST00000412993 SCUBE2Q9NQ36 999 aa11.48□□□□□ -0.57
PGBD4P8-201ENST00000412993 STK24Q9Y6E0 443 aa11.47□□□□□ -0.57
PGBD4P8-201ENST00000412993 SOX12O15370 315 aa11.45□□□□□ -0.58
PGBD4P8-201ENST00000412993 AMER1Q5JTC6 1135 aaPredicted RBP11.44□□□□□ -0.58
PGBD4P8-201ENST00000412993 HS6ST3Q8IZP7 471 aa11.42□□□□□ -0.58
PGBD4P8-201ENST00000412993 L3MBTL3Q96JM7 780 aaPredicted RBP11.41□□□□□ -0.58
PGBD4P8-201ENST00000412993 PHF8Q9UPP1 1060 aa11.37□□□□□ -0.59
PGBD4P8-201ENST00000412993 NLRP6P59044 892 aa11.36□□□□□ -0.59
PGBD4P8-201ENST00000412993 DPY19L2Q6NUT2 758 aa11.35□□□□□ -0.59
PGBD4P8-201ENST00000412993 FBXO22Q8NEZ5 403 aa11.35□□□□□ -0.59
PGBD4P8-201ENST00000412993 MS4A4AQ96JQ5 239 aa11.35□□□□□ -0.59
PGBD4P8-201ENST00000412993 MFRPQ9BY79 579 aa11.34□□□□□ -0.59
PGBD4P8-201ENST00000412993 BOLA1Q9Y3E2 137 aa11.34□□□□□ -0.59
PGBD4P8-201ENST00000412993 CHGAP10645 457 aaKnown RBP11.33□□□□□ -0.6
PGBD4P8-201ENST00000412993 C3orf67Q6ZVT6 689 aa11.33□□□□□ -0.6
PGBD4P8-201ENST00000412993 DNAJC5Q9H3Z4 198 aa11.33□□□□□ -0.6
PGBD4P8-201ENST00000412993 G3V3G9 751 aa11.32□□□□□ -0.6
PGBD4P8-201ENST00000412993 RTN4Q9NQC3 1192 aaKnown RBP11.32□□□□□ -0.6
PGBD4P8-201ENST00000412993 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.32□□□□□ -0.6
PGBD4P8-201ENST00000412993 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
PGBD4P8-201ENST00000412993 SLAIN1Q8ND83 568 aa11.29□□□□□ -0.6
PGBD4P8-201ENST00000412993 DCAF8L2P0C7V8 631 aa11.26□□□□□ -0.61
PGBD4P8-201ENST00000412993 MICALL2Q8IY33 904 aa11.26□□□□□ -0.61
PGBD4P8-201ENST00000412993 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
PGBD4P8-201ENST00000412993 RYDENQ9NUL5 291 aaKnown RBP11.2□□□□□ -0.62
PGBD4P8-201ENST00000412993 SNPHO15079 494 aa11.14□□□□□ -0.63
PGBD4P8-201ENST00000412993 PPP1R37O75864 691 aa11.13□□□□□ -0.63
PGBD4P8-201ENST00000412993 TMEM92Q6UXU6 159 aa11.12□□□□□ -0.63
PGBD4P8-201ENST00000412993 LCE2DQ5TA82 110 aaPredicted RBP11.1□□□□□ -0.63
PGBD4P8-201ENST00000412993 GTPBP6O43824 516 aaPredicted RBP11.08□□□□□ -0.64
PGBD4P8-201ENST00000412993 FAM163AQ96GL9 167 aaPredicted RBP11.08□□□□□ -0.64
PGBD4P8-201ENST00000412993 BBXQ8WY36 941 aaPredicted RBP11.07□□□□□ -0.64
PGBD4P8-201ENST00000412993 KIF3CO14782 793 aa11.05□□□□□ -0.64
PGBD4P8-201ENST00000412993 ST18O60284 1047 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms