RNA–Protein interactions for RNA: ENST00000412424.1

AC009411.1-202, humanhuman

TSL 4 BASIC

Gene AC009411.1, Length 548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009411.1-202ENST00000412424 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
AC009411.1-202ENST00000412424 MIER1Q8N108 512 aa12.19□□□□□ -0.46
AC009411.1-202ENST00000412424 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
AC009411.1-202ENST00000412424 KIF12Q96FN5 646 aa12.15□□□□□ -0.46
AC009411.1-202ENST00000412424 METRNQ9UJH8 293 aa12.15□□□□□ -0.46
AC009411.1-202ENST00000412424 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
AC009411.1-202ENST00000412424 C7P10643 843 aa12.12□□□□□ -0.47
AC009411.1-202ENST00000412424 SLC39A7Q92504 469 aa12.12□□□□□ -0.47
AC009411.1-202ENST00000412424 ATN1P54259 1190 aaPredicted RBP12.09□□□□□ -0.47
AC009411.1-202ENST00000412424 POTEJP0CG39 1038 aa12.08□□□□□ -0.48
AC009411.1-202ENST00000412424 MAP3K13O43283 966 aa12.07□□□□□ -0.48
AC009411.1-202ENST00000412424 PLCD3Q8N3E9 789 aa12.07□□□□□ -0.48
AC009411.1-202ENST00000412424 TRPC6Q9Y210 931 aa12.07□□□□□ -0.48
AC009411.1-202ENST00000412424 BMP2KQ9NSY1 1161 aaPredicted RBP12.05□□□□□ -0.48
AC009411.1-202ENST00000412424 TIE1P35590 1138 aa11.99□□□□□ -0.49
AC009411.1-202ENST00000412424 FKBP8Q14318 412 aa11.99□□□□□ -0.49
AC009411.1-202ENST00000412424 NUBP1P53384 320 aa11.98□□□□□ -0.49
AC009411.1-202ENST00000412424 POTEFA5A3E0 1075 aa11.97□□□□□ -0.49
AC009411.1-202ENST00000412424 MAMSTRQ6ZN01 415 aa11.97□□□□□ -0.49
AC009411.1-202ENST00000412424 PLSCR2Q9NRY7 297 aa11.97□□□□□ -0.49
AC009411.1-202ENST00000412424 ZBTB47Q9UFB7 747 aaPredicted RBP11.95□□□□□ -0.5
AC009411.1-202ENST00000412424 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
AC009411.1-202ENST00000412424 POTEMA6NI47 508 aa11.93□□□□□ -0.5
AC009411.1-202ENST00000412424 PCDHB13Q9Y5F0 798 aa11.92□□□□□ -0.5
AC009411.1-202ENST00000412424 SGIP1Q9BQI5 828 aa11.91□□□□□ -0.5
AC009411.1-202ENST00000412424 POTEGQ6S5H5 508 aa11.9□□□□□ -0.5
AC009411.1-202ENST00000412424 SCUBE2Q9NQ36 999 aa11.9□□□□□ -0.5
AC009411.1-202ENST00000412424 COLQQ9Y215 455 aaPredicted RBP11.89□□□□□ -0.51
AC009411.1-202ENST00000412424 IFNL1Q8IU54 200 aa11.87□□□□□ -0.51
AC009411.1-202ENST00000412424 FAM212AQ96EL1 285 aa11.87□□□□□ -0.51
AC009411.1-202ENST00000412424 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
AC009411.1-202ENST00000412424 SEC24BO95487 1268 aa11.85□□□□□ -0.51
AC009411.1-202ENST00000412424 LCE2DQ5TA82 110 aaPredicted RBP11.83□□□□□ -0.52
AC009411.1-202ENST00000412424 IER5LQ5T953 404 aa11.81□□□□□ -0.52
AC009411.1-202ENST00000412424 FAM163AQ96GL9 167 aaPredicted RBP11.81□□□□□ -0.52
AC009411.1-202ENST00000412424 TMEM106CQ9BVX2 250 aa11.79□□□□□ -0.52
AC009411.1-202ENST00000412424 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
AC009411.1-202ENST00000412424 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
AC009411.1-202ENST00000412424 PYGBP11216 843 aa11.73□□□□□ -0.53
AC009411.1-202ENST00000412424 PCDH10Q9P2E7 1040 aa11.73□□□□□ -0.53
AC009411.1-202ENST00000412424 PLCG2P16885 1265 aa11.68□□□□□ -0.54
AC009411.1-202ENST00000412424 IRX5P78411 483 aaPredicted RBP11.68□□□□□ -0.54
AC009411.1-202ENST00000412424 PCDHB8Q9UN66 801 aa11.68□□□□□ -0.54
AC009411.1-202ENST00000412424 VASPP50552 380 aaPredicted RBP11.65□□□□□ -0.54
AC009411.1-202ENST00000412424 KLHL34Q8N239 644 aa11.64□□□□□ -0.55
AC009411.1-202ENST00000412424 SLAIN1Q8ND83 568 aa11.64□□□□□ -0.55
AC009411.1-202ENST00000412424 OCEL1Q9H607 264 aa11.62□□□□□ -0.55
AC009411.1-202ENST00000412424 GSE1Q14687 1217 aa11.58□□□□□ -0.56
AC009411.1-202ENST00000412424 ST18O60284 1047 aa11.55□□□□□ -0.56
AC009411.1-202ENST00000412424 ZNF467Q7Z7K2 595 aaPredicted RBP11.54□□□□□ -0.56
AC009411.1-202ENST00000412424 CHRM1P11229 460 aaPredicted RBP11.53□□□□□ -0.56
AC009411.1-202ENST00000412424 CDAN1Q8IWY9 1227 aa11.52□□□□□ -0.57
AC009411.1-202ENST00000412424 PDCD7Q8N8D1 485 aaKnown RBP11.49□□□□□ -0.57
AC009411.1-202ENST00000412424 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
AC009411.1-202ENST00000412424 PSEN1P49768 467 aa11.47□□□□□ -0.57
AC009411.1-202ENST00000412424 GOLGA2Q08379 1002 aa11.46□□□□□ -0.57
AC009411.1-202ENST00000412424 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.57
AC009411.1-202ENST00000412424 IFNLR1Q8IU57 520 aaPredicted RBP11.45□□□□□ -0.58
AC009411.1-202ENST00000412424 SPOCK2Q92563 424 aa11.42□□□□□ -0.58
AC009411.1-202ENST00000412424 SNPHO15079 494 aa11.41□□□□□ -0.58
AC009411.1-202ENST00000412424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.41□□□□□ -0.58
AC009411.1-202ENST00000412424 L3MBTL3Q96JM7 780 aaPredicted RBP11.4□□□□□ -0.58
AC009411.1-202ENST00000412424 TMEM121BQ9BXQ6 578 aaPredicted RBP11.4□□□□□ -0.58
AC009411.1-202ENST00000412424 PDAP1Q13442 181 aaKnown RBP11.39□□□□□ -0.59
AC009411.1-202ENST00000412424 CIZ1Q9ULV3 898 aaPredicted RBP11.39□□□□□ -0.59
AC009411.1-202ENST00000412424 C3orf67Q6ZVT6 689 aa11.38□□□□□ -0.59
AC009411.1-202ENST00000412424 ILDR1Q86SU0 546 aaPredicted RBP11.36□□□□□ -0.59
AC009411.1-202ENST00000412424 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
AC009411.1-202ENST00000412424 DPY19L2Q6NUT2 758 aa11.33□□□□□ -0.6
AC009411.1-202ENST00000412424 CABP2Q9NPB3 220 aa11.32□□□□□ -0.6
AC009411.1-202ENST00000412424 BOLA1Q9Y3E2 137 aa11.25□□□□□ -0.61
AC009411.1-202ENST00000412424 EMP3P54852 163 aa11.24□□□□□ -0.61
AC009411.1-202ENST00000412424 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
AC009411.1-202ENST00000412424 MMRN1Q13201 1228 aa11.22□□□□□ -0.61
AC009411.1-202ENST00000412424 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
AC009411.1-202ENST00000412424 G3V3G9 751 aa11.2□□□□□ -0.62
AC009411.1-202ENST00000412424 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
AC009411.1-202ENST00000412424 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
AC009411.1-202ENST00000412424 EFCAB3Q8N7B9 438 aa11.18□□□□□ -0.62
AC009411.1-202ENST00000412424 FAM205CA6NFA0 338 aa11.17□□□□□ -0.62
AC009411.1-202ENST00000412424 HOXB3P14651 431 aaPredicted RBP11.17□□□□□ -0.62
AC009411.1-202ENST00000412424 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
AC009411.1-202ENST00000412424 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
AC009411.1-202ENST00000412424 KRTAP3-2Q9BYR7 98 aa11.13□□□□□ -0.63
AC009411.1-202ENST00000412424 RNF25Q96BH1 459 aaPredicted RBP11.1□□□□□ -0.63
AC009411.1-202ENST00000412424 RIOK3O14730 519 aaKnown RBP11.09□□□□□ -0.63
AC009411.1-202ENST00000412424 ZNF710Q8N1W2 664 aa11.08□□□□□ -0.64
AC009411.1-202ENST00000412424 HOXB1P14653 301 aaPredicted RBP11.07□□□□□ -0.64
AC009411.1-202ENST00000412424 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.06□□□□□ -0.64
AC009411.1-202ENST00000412424 DOK7Q18PE1 504 aa11.06□□□□□ -0.64
AC009411.1-202ENST00000412424 MICALL2Q8IY33 904 aa11.06□□□□□ -0.64
AC009411.1-202ENST00000412424 ZFP91Q96JP5 570 aaPredicted RBP11.06□□□□□ -0.64
AC009411.1-202ENST00000412424 SOX12O15370 315 aa11.05□□□□□ -0.64
AC009411.1-202ENST00000412424 TMEM92Q6UXU6 159 aa11.05□□□□□ -0.64
AC009411.1-202ENST00000412424 MS4A4AQ96JQ5 239 aa11.04□□□□□ -0.64
AC009411.1-202ENST00000412424 VGFO15240 615 aaPredicted RBP11.03□□□□□ -0.64
AC009411.1-202ENST00000412424 PHF8Q9UPP1 1060 aa11.02□□□□□ -0.65
AC009411.1-202ENST00000412424 ERBB3P21860 1342 aa11.01□□□□□ -0.65
AC009411.1-202ENST00000412424 RIMBP2O15034 1052 aa10.98□□□□□ -0.65
AC009411.1-202ENST00000412424 VARS2Q5ST30 1063 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms