RNA–Protein interactions for RNA: ENST00000411398.1

RNU6-1052P-201, Transcript of RNA, U6 small nuclear 1052, pseudogene, humanhuman

BASIC

Gene RNU6-1052P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1052P-201ENST00000411398 SPNS2Q8IVW8 549 aa3.68□□□□□ -1.82
RNU6-1052P-201ENST00000411398 PELP1Q8IZL8 1130 aaKnown RBP3.68□□□□□ -1.82
RNU6-1052P-201ENST00000411398 POTEJP0CG39 1038 aa3.67□□□□□ -1.82
RNU6-1052P-201ENST00000411398 TMEM121BQ9BXQ6 578 aaPredicted RBP3.66□□□□□ -1.82
RNU6-1052P-201ENST00000411398 SNPHO15079 494 aa3.64□□□□□ -1.83
RNU6-1052P-201ENST00000411398 MKRN4PQ13434 485 aaPredicted RBP3.64□□□□□ -1.83
RNU6-1052P-201ENST00000411398 CREBZFQ9NS37 354 aa3.62□□□□□ -1.83
RNU6-1052P-201ENST00000411398 PHF12Q96QT6 1004 aa3.61□□□□□ -1.83
RNU6-1052P-201ENST00000411398 ST18O60284 1047 aa3.6□□□□□ -1.83
RNU6-1052P-201ENST00000411398 SEC24BO95487 1268 aa3.59□□□□□ -1.83
RNU6-1052P-201ENST00000411398 TIE1P35590 1138 aa3.59□□□□□ -1.83
RNU6-1052P-201ENST00000411398 IER5LQ5T953 404 aa3.59□□□□□ -1.83
RNU6-1052P-201ENST00000411398 MS4A3Q96HJ5 214 aa3.59□□□□□ -1.83
RNU6-1052P-201ENST00000411398 SLC4A1APQ9BWU0 796 aaKnown RBP3.59□□□□□ -1.83
RNU6-1052P-201ENST00000411398 ATN1P54259 1190 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1052P-201ENST00000411398 SLAIN1Q8ND83 568 aa3.56□□□□□ -1.84
RNU6-1052P-201ENST00000411398 POTEFA5A3E0 1075 aa3.55□□□□□ -1.84
RNU6-1052P-201ENST00000411398 SGIP1Q9BQI5 828 aa3.53□□□□□ -1.84
RNU6-1052P-201ENST00000411398 BMP2KQ9NSY1 1161 aaPredicted RBP3.52□□□□□ -1.85
RNU6-1052P-201ENST00000411398 KIF12Q96FN5 646 aa3.51□□□□□ -1.85
RNU6-1052P-201ENST00000411398 MNX1P50219 401 aaPredicted RBP3.5□□□□□ -1.85
RNU6-1052P-201ENST00000411398 CCDC61Q9Y6R9 512 aa3.49□□□□□ -1.85
RNU6-1052P-201ENST00000411398 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.48□□□□□ -1.85
RNU6-1052P-201ENST00000411398 COLQQ9Y215 455 aaPredicted RBP3.48□□□□□ -1.85
RNU6-1052P-201ENST00000411398 TTLL13PA6NNM8 815 aa3.47□□□□□ -1.85
RNU6-1052P-201ENST00000411398 PTGER2P43116 358 aa3.47□□□□□ -1.85
RNU6-1052P-201ENST00000411398 PLCG2P16885 1265 aa3.46□□□□□ -1.86
RNU6-1052P-201ENST00000411398 EMP3P54852 163 aa3.46□□□□□ -1.86
RNU6-1052P-201ENST00000411398 TSPYL2Q9H2G4 693 aaPredicted RBP3.46□□□□□ -1.86
RNU6-1052P-201ENST00000411398 RNF166Q96A37 237 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1052P-201ENST00000411398 KRTAP3-3Q9BYR6 98 aa3.45□□□□□ -1.86
RNU6-1052P-201ENST00000411398 KRTAP3-2Q9BYR7 98 aa3.45□□□□□ -1.86
RNU6-1052P-201ENST00000411398 TRIM35Q9UPQ4 493 aa3.45□□□□□ -1.86
RNU6-1052P-201ENST00000411398 PLEKHG5O94827 1062 aa3.44□□□□□ -1.86
RNU6-1052P-201ENST00000411398 OCEL1Q9H607 264 aa3.44□□□□□ -1.86
RNU6-1052P-201ENST00000411398 MAP3K13O43283 966 aa3.43□□□□□ -1.86
RNU6-1052P-201ENST00000411398 MARVELD3Q96A59 401 aa3.43□□□□□ -1.86
RNU6-1052P-201ENST00000411398 HS3ST6Q96QI5 342 aa3.43□□□□□ -1.86
RNU6-1052P-201ENST00000411398 FAM205CA6NFA0 338 aa3.41□□□□□ -1.86
RNU6-1052P-201ENST00000411398 ZBTB22O15209 634 aa3.41□□□□□ -1.86
RNU6-1052P-201ENST00000411398 IRX5P78411 483 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1052P-201ENST00000411398 L3MBTL3Q96JM7 780 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1052P-201ENST00000411398 MYT1LQ9UL68 1186 aa3.41□□□□□ -1.86
RNU6-1052P-201ENST00000411398 TRPC6Q9Y210 931 aa3.4□□□□□ -1.87
RNU6-1052P-201ENST00000411398 PCDHB13Q9Y5F0 798 aa3.38□□□□□ -1.87
RNU6-1052P-201ENST00000411398 SPDYE4A6NLX3 237 aa3.37□□□□□ -1.87
RNU6-1052P-201ENST00000411398 RGS20O76081 388 aa3.37□□□□□ -1.87
RNU6-1052P-201ENST00000411398 POTEB3A0JP26 581 aa3.36□□□□□ -1.87
RNU6-1052P-201ENST00000411398 POTEBQ6S5H4 581 aa3.36□□□□□ -1.87
RNU6-1052P-201ENST00000411398 C3orf67Q6ZVT6 689 aa3.36□□□□□ -1.87
RNU6-1052P-201ENST00000411398 TMEM106CQ9BVX2 250 aa3.36□□□□□ -1.87
RNU6-1052P-201ENST00000411398 HOXB1P14653 301 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1052P-201ENST00000411398 ZBTB47Q9UFB7 747 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1052P-201ENST00000411398 ERBB3P21860 1342 aa3.34□□□□□ -1.87
RNU6-1052P-201ENST00000411398 RIMBP2O15034 1052 aa3.33□□□□□ -1.88
RNU6-1052P-201ENST00000411398 ZNF687Q8N1G0 1237 aa3.33□□□□□ -1.88
RNU6-1052P-201ENST00000411398 DOK7Q18PE1 504 aa3.32□□□□□ -1.88
RNU6-1052P-201ENST00000411398 ZNF710Q8N1W2 664 aa3.32□□□□□ -1.88
RNU6-1052P-201ENST00000411398 ZSWIM6Q9HCJ5 1215 aa3.31□□□□□ -1.88
RNU6-1052P-201ENST00000411398 PLA2G2EQ9NZK7 142 aa3.31□□□□□ -1.88
RNU6-1052P-201ENST00000411398 HCSTQ9UBK5 93 aa3.31□□□□□ -1.88
RNU6-1052P-201ENST00000411398 IFNL1Q8IU54 200 aa3.3□□□□□ -1.88
RNU6-1052P-201ENST00000411398 RASEFQ8IZ41 740 aa3.29□□□□□ -1.88
RNU6-1052P-201ENST00000411398 MIER1Q8N108 512 aa3.29□□□□□ -1.88
RNU6-1052P-201ENST00000411398 G3V3G9 751 aa3.28□□□□□ -1.88
RNU6-1052P-201ENST00000411398 GOLGA2Q08379 1002 aa3.28□□□□□ -1.88
RNU6-1052P-201ENST00000411398 MKRN3Q13064 507 aaKnown RBP3.28□□□□□ -1.88
RNU6-1052P-201ENST00000411398 DCAF8Q5TAQ9 597 aa3.28□□□□□ -1.88
RNU6-1052P-201ENST00000411398 HOXB3P14651 431 aaPredicted RBP3.26□□□□□ -1.89
RNU6-1052P-201ENST00000411398 FAM212AQ96EL1 285 aa3.26□□□□□ -1.89
RNU6-1052P-201ENST00000411398 IRX2Q9BZI1 471 aaPredicted RBP3.26□□□□□ -1.89
RNU6-1052P-201ENST00000411398 IFFO2Q5TF58 517 aa3.25□□□□□ -1.89
RNU6-1052P-201ENST00000411398 PROM2Q8N271 834 aa3.25□□□□□ -1.89
RNU6-1052P-201ENST00000411398 PDCD7Q8N8D1 485 aaKnown RBP3.25□□□□□ -1.89
RNU6-1052P-201ENST00000411398 VARS2Q5ST30 1063 aaKnown RBP3.24□□□□□ -1.89
RNU6-1052P-201ENST00000411398 ANKRD13DQ6ZTN6 518 aa3.23□□□□□ -1.89
RNU6-1052P-201ENST00000411398 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.23□□□□□ -1.89
RNU6-1052P-201ENST00000411398 PBX2P40425 430 aa3.22□□□□□ -1.89
RNU6-1052P-201ENST00000411398 NUBP1P53384 320 aa3.22□□□□□ -1.89
RNU6-1052P-201ENST00000411398 ILDR1Q86SU0 546 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1052P-201ENST00000411398 ZNF467Q7Z7K2 595 aaPredicted RBP3.21□□□□□ -1.9
RNU6-1052P-201ENST00000411398 PLCD3Q8N3E9 789 aa3.21□□□□□ -1.9
RNU6-1052P-201ENST00000411398 LSM11P83369 360 aaKnown RBP eCLIP3.2□□□□□ -1.9
RNU6-1052P-201ENST00000411398 BOLA1Q9Y3E2 137 aa3.2□□□□□ -1.9
RNU6-1052P-201ENST00000411398 LAPTM4AQ15012 233 aa3.18□□□□□ -1.9
RNU6-1052P-201ENST00000411398 GPR153Q6NV75 609 aa3.18□□□□□ -1.9
RNU6-1052P-201ENST00000411398 ZNF316A6NFI3 1004 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1052P-201ENST00000411398 CHRM1P11229 460 aaPredicted RBP3.16□□□□□ -1.9
RNU6-1052P-201ENST00000411398 TK2O00142 265 aa3.15□□□□□ -1.91
RNU6-1052P-201ENST00000411398 GSE1Q14687 1217 aa3.14□□□□□ -1.91
RNU6-1052P-201ENST00000411398 STAC3Q96MF2 364 aa3.14□□□□□ -1.91
RNU6-1052P-201ENST00000411398 PCDHB8Q9UN66 801 aa3.14□□□□□ -1.91
RNU6-1052P-201ENST00000411398 PSDA5PKW4 1024 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1052P-201ENST00000411398 PYGBP11216 843 aa3.13□□□□□ -1.91
RNU6-1052P-201ENST00000411398 PSEN1P49768 467 aa3.13□□□□□ -1.91
RNU6-1052P-201ENST00000411398 Q6ZNB5 142 aa3.13□□□□□ -1.91
RNU6-1052P-201ENST00000411398 A0A0G2JS52 829 aa3.12□□□□□ -1.91
RNU6-1052P-201ENST00000411398 ARHGAP33O14559 1287 aa3.1□□□□□ -1.91
RNU6-1052P-201ENST00000411398 PDAP1Q13442 181 aaKnown RBP3.1□□□□□ -1.91
RNU6-1052P-201ENST00000411398 ARSIQ5FYB1 569 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms