RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 PELP1Q8IZL8 1130 aaKnown RBP8.83□□□□□ -1
RNU6-55P-201ENST00000411092 CCDC61Q9Y6R9 512 aa8.82□□□□□ -1
RNU6-55P-201ENST00000411092 POTEB2H3BUK9 544 aa8.81□□□□□ -1
RNU6-55P-201ENST00000411092 ZBTB47Q9UFB7 747 aaPredicted RBP8.79□□□□□ -1
RNU6-55P-201ENST00000411092 RASEFQ8IZ41 740 aa8.78□□□□□ -1
RNU6-55P-201ENST00000411092 ASTLQ6HA08 431 aaPredicted RBP8.76□□□□□ -1.01
RNU6-55P-201ENST00000411092 ATMINO43313 823 aaPredicted RBP8.75□□□□□ -1.01
RNU6-55P-201ENST00000411092 VASPP50552 380 aaPredicted RBP8.75□□□□□ -1.01
RNU6-55P-201ENST00000411092 KIF12Q96FN5 646 aa8.75□□□□□ -1.01
RNU6-55P-201ENST00000411092 TRPC6Q9Y210 931 aa8.75□□□□□ -1.01
RNU6-55P-201ENST00000411092 NUBP1P53384 320 aa8.74□□□□□ -1.01
RNU6-55P-201ENST00000411092 OTUD5Q96G74 571 aa8.74□□□□□ -1.01
RNU6-55P-201ENST00000411092 MAP3K13O43283 966 aa8.71□□□□□ -1.02
RNU6-55P-201ENST00000411092 ATN1P54259 1190 aaPredicted RBP8.71□□□□□ -1.02
RNU6-55P-201ENST00000411092 METRNQ9UJH8 293 aa8.7□□□□□ -1.02
RNU6-55P-201ENST00000411092 KLHL34Q8N239 644 aa8.69□□□□□ -1.02
RNU6-55P-201ENST00000411092 POTEJP0CG39 1038 aa8.68□□□□□ -1.02
RNU6-55P-201ENST00000411092 FAM212AQ96EL1 285 aa8.67□□□□□ -1.02
RNU6-55P-201ENST00000411092 BMP2KQ9NSY1 1161 aaPredicted RBP8.67□□□□□ -1.02
RNU6-55P-201ENST00000411092 DCAF8Q5TAQ9 597 aa8.65□□□□□ -1.02
RNU6-55P-201ENST00000411092 SLC39A7Q92504 469 aa8.65□□□□□ -1.02
RNU6-55P-201ENST00000411092 POTEFA5A3E0 1075 aa8.64□□□□□ -1.03
RNU6-55P-201ENST00000411092 C7P10643 843 aa8.63□□□□□ -1.03
RNU6-55P-201ENST00000411092 IFNLR1Q8IU57 520 aaPredicted RBP8.62□□□□□ -1.03
RNU6-55P-201ENST00000411092 TIE1P35590 1138 aa8.61□□□□□ -1.03
RNU6-55P-201ENST00000411092 PCDHB13Q9Y5F0 798 aa8.6□□□□□ -1.03
RNU6-55P-201ENST00000411092 TTLL13PA6NNM8 815 aa8.59□□□□□ -1.03
RNU6-55P-201ENST00000411092 SGIP1Q9BQI5 828 aa8.58□□□□□ -1.04
RNU6-55P-201ENST00000411092 PYGBP11216 843 aa8.57□□□□□ -1.04
RNU6-55P-201ENST00000411092 IFNL1Q8IU54 200 aa8.57□□□□□ -1.04
RNU6-55P-201ENST00000411092 SPOCK2Q92563 424 aa8.56□□□□□ -1.04
RNU6-55P-201ENST00000411092 COLQQ9Y215 455 aaPredicted RBP8.56□□□□□ -1.04
RNU6-55P-201ENST00000411092 GSE1Q14687 1217 aa8.55□□□□□ -1.04
RNU6-55P-201ENST00000411092 TRIM35Q9UPQ4 493 aa8.54□□□□□ -1.04
RNU6-55P-201ENST00000411092 CIZ1Q9ULV3 898 aaPredicted RBP8.5□□□□□ -1.05
RNU6-55P-201ENST00000411092 POTEMA6NI47 508 aa8.49□□□□□ -1.05
RNU6-55P-201ENST00000411092 LCE2DQ5TA82 110 aaPredicted RBP8.49□□□□□ -1.05
RNU6-55P-201ENST00000411092 PCDHB8Q9UN66 801 aa8.49□□□□□ -1.05
RNU6-55P-201ENST00000411092 TMEM106CQ9BVX2 250 aa8.48□□□□□ -1.05
RNU6-55P-201ENST00000411092 SEC24BO95487 1268 aa8.47□□□□□ -1.05
RNU6-55P-201ENST00000411092 MAMSTRQ6ZN01 415 aa8.47□□□□□ -1.05
RNU6-55P-201ENST00000411092 SCUBE2Q9NQ36 999 aa8.47□□□□□ -1.05
RNU6-55P-201ENST00000411092 IER5LQ5T953 404 aa8.46□□□□□ -1.06
RNU6-55P-201ENST00000411092 POTEGQ6S5H5 508 aa8.46□□□□□ -1.06
RNU6-55P-201ENST00000411092 CHRM1P11229 460 aaPredicted RBP8.45□□□□□ -1.06
RNU6-55P-201ENST00000411092 ZNF467Q7Z7K2 595 aaPredicted RBP8.43□□□□□ -1.06
RNU6-55P-201ENST00000411092 PLSCR2Q9NRY7 297 aa8.43□□□□□ -1.06
RNU6-55P-201ENST00000411092 IRX5P78411 483 aaPredicted RBP8.41□□□□□ -1.06
RNU6-55P-201ENST00000411092 FAM163AQ96GL9 167 aaPredicted RBP8.39□□□□□ -1.07
RNU6-55P-201ENST00000411092 PLCG2P16885 1265 aa8.37□□□□□ -1.07
RNU6-55P-201ENST00000411092 PSEN1P49768 467 aa8.35□□□□□ -1.07
RNU6-55P-201ENST00000411092 TRIM41Q8WV44 630 aa8.35□□□□□ -1.07
RNU6-55P-201ENST00000411092 PDAP1Q13442 181 aaKnown RBP8.33□□□□□ -1.08
RNU6-55P-201ENST00000411092 SLAIN1Q8ND83 568 aa8.33□□□□□ -1.08
RNU6-55P-201ENST00000411092 OCEL1Q9H607 264 aa8.32□□□□□ -1.08
RNU6-55P-201ENST00000411092 GOLGA2Q08379 1002 aa8.31□□□□□ -1.08
RNU6-55P-201ENST00000411092 PDCD7Q8N8D1 485 aaKnown RBP8.3□□□□□ -1.08
RNU6-55P-201ENST00000411092 MKRN3Q13064 507 aaKnown RBP8.29□□□□□ -1.08
RNU6-55P-201ENST00000411092 RNF25Q96BH1 459 aaPredicted RBP8.27□□□□□ -1.09
RNU6-55P-201ENST00000411092 CABP2Q9NPB3 220 aa8.27□□□□□ -1.09
RNU6-55P-201ENST00000411092 ST18O60284 1047 aa8.26□□□□□ -1.09
RNU6-55P-201ENST00000411092 RIOK3O14730 519 aaKnown RBP8.25□□□□□ -1.09
RNU6-55P-201ENST00000411092 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.24□□□□□ -1.09
RNU6-55P-201ENST00000411092 PCDH10Q9P2E7 1040 aa8.24□□□□□ -1.09
RNU6-55P-201ENST00000411092 ECM2O94769 699 aaPredicted RBP8.22□□□□□ -1.09
RNU6-55P-201ENST00000411092 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.22□□□□□ -1.09
RNU6-55P-201ENST00000411092 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.21□□□□□ -1.1
RNU6-55P-201ENST00000411092 VGFO15240 615 aaPredicted RBP8.21□□□□□ -1.1
RNU6-55P-201ENST00000411092 PKD2Q13563 968 aa8.21□□□□□ -1.1
RNU6-55P-201ENST00000411092 DPY19L2Q6NUT2 758 aa8.21□□□□□ -1.1
RNU6-55P-201ENST00000411092 ZFP91Q96JP5 570 aaPredicted RBP8.21□□□□□ -1.1
RNU6-55P-201ENST00000411092 ILDR1Q86SU0 546 aaPredicted RBP8.2□□□□□ -1.1
RNU6-55P-201ENST00000411092 CDAN1Q8IWY9 1227 aa8.19□□□□□ -1.1
RNU6-55P-201ENST00000411092 EFCAB3Q8N7B9 438 aa8.19□□□□□ -1.1
RNU6-55P-201ENST00000411092 L3MBTL3Q96JM7 780 aaPredicted RBP8.17□□□□□ -1.1
RNU6-55P-201ENST00000411092 C3orf67Q6ZVT6 689 aa8.16□□□□□ -1.1
RNU6-55P-201ENST00000411092 RGL2O15211 777 aa8.15□□□□□ -1.1
RNU6-55P-201ENST00000411092 TAOK2Q9UL54 1235 aa8.15□□□□□ -1.1
RNU6-55P-201ENST00000411092 MARVELD3Q96A59 401 aa8.14□□□□□ -1.11
RNU6-55P-201ENST00000411092 BCL11BQ9C0K0 894 aaPredicted RBP8.13□□□□□ -1.11
RNU6-55P-201ENST00000411092 STK24Q9Y6E0 443 aa8.12□□□□□ -1.11
RNU6-55P-201ENST00000411092 STK25O00506 426 aa8.11□□□□□ -1.11
RNU6-55P-201ENST00000411092 SOX12O15370 315 aa8.11□□□□□ -1.11
RNU6-55P-201ENST00000411092 SNPHO15079 494 aa8.1□□□□□ -1.11
RNU6-55P-201ENST00000411092 TMEM121BQ9BXQ6 578 aaPredicted RBP8.1□□□□□ -1.11
RNU6-55P-201ENST00000411092 BOLA1Q9Y3E2 137 aa8.1□□□□□ -1.11
RNU6-55P-201ENST00000411092 G3V3G9 751 aa8.09□□□□□ -1.11
RNU6-55P-201ENST00000411092 PHF8Q9UPP1 1060 aa8.09□□□□□ -1.11
RNU6-55P-201ENST00000411092 MS4A4AQ96JQ5 239 aa8.07□□□□□ -1.12
RNU6-55P-201ENST00000411092 POTEB3A0JP26 581 aa8.06□□□□□ -1.12
RNU6-55P-201ENST00000411092 POTEBQ6S5H4 581 aa8.06□□□□□ -1.12
RNU6-55P-201ENST00000411092 HOXB3P14651 431 aaPredicted RBP8.04□□□□□ -1.12
RNU6-55P-201ENST00000411092 EMP3P54852 163 aa8.04□□□□□ -1.12
RNU6-55P-201ENST00000411092 NLRP6P59044 892 aa8.04□□□□□ -1.12
RNU6-55P-201ENST00000411092 MFRPQ9BY79 579 aa8.03□□□□□ -1.12
RNU6-55P-201ENST00000411092 TMEM92Q6UXU6 159 aa8.02□□□□□ -1.13
RNU6-55P-201ENST00000411092 MICALL2Q8IY33 904 aa8.02□□□□□ -1.13
RNU6-55P-201ENST00000411092 FBXO22Q8NEZ5 403 aa8.02□□□□□ -1.13
RNU6-55P-201ENST00000411092 HS3ST6Q96QI5 342 aa8.01□□□□□ -1.13
RNU6-55P-201ENST00000411092 FAM205CA6NFA0 338 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms