RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 RAPGEFL1Q9UHV5 662 aa0.83□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ADGRL1O94910 1474 aa0.83□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 SETD1AO15047 1707 aaKnown RBP0.83□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ZFHX4Q86UP3 3567 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 CECR2Q9BXF3 1484 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 KRT37O76014 449 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ADRA2BP18089 450 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 KRTAP1-3Q8IUG1 177 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 EHMT2Q96KQ7 1210 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 RGS17Q9UGC6 210 aaPredicted RBP0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ATF5Q9Y2D1 282 aaPredicted RBP0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 TRANK1O15050 2925 aa0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 RP1L1Q8IWN7 2480 aaPredicted RBP0.82□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 RYR1P21817 5038 aa0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ACAP1Q15027 740 aa0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 POTEAQ6S8J7 498 aa0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 PRDM6Q9NQX0 595 aa0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 COL6A3P12111 3177 aa0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 SETXQ7Z333 2677 aaKnown RBP0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 CACNA1GO43497 2377 aa0.81□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 MUC2Q02817 5179 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ARHGEF11O15085 1522 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 KRTAP4-8A0A0G2JLE6 195 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 DCAF8L1A6NGE4 600 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 HSPA1LP34931 641 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 MAP3K11Q16584 847 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 TMEM121BQ9BXQ6 578 aaPredicted RBP0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 KRTAP4-7Q9BYR0 210 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 KRTAP4-2Q9BYR5 136 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 USP19O94966 1318 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 ERCC6Q03468 1493 aa0.8□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 HYDINQ4G0P3 5121 aa0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 HSPA6P17066 643 aa0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 CACNB1Q02641 598 aaPredicted RBP0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 PELP1Q8IZL8 1130 aaKnown RBP0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 SERBP1Q8NC51 408 aaKnown RBP eCLIP0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 SCAF1Q9H7N4 1312 aaKnown RBP0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 TNRC18O15417 2968 aaPredicted RBP0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 AATKQ6ZMQ8 1374 aa0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 CEP164Q9UPV0 1460 aa0.79□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 FER1L4A9Z1Z3 1794 aa0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 UBAP1LF5GYI3 381 aa0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 MNX1P50219 401 aaPredicted RBP0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 TRPM4Q8TD43 1214 aa0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 COL25A1Q9BXS0 654 aaPredicted RBP0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 SRPK3Q9UPE1 567 aa0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 DNHD1Q96M86 4753 aa0.78□□□□□ -2.28
RNU6ATAC11P-201ENST00000408541 USP24Q9UPU5 2620 aa0.78□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KIAA1210Q9ULL0 1709 aa0.78□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ZNF462Q96JM2 2506 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 FBN3Q75N90 2809 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KRTAP9-6A0A140TA67 174 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CCDC85CA6NKD9 419 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CYSRT1A8MQ03 144 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ZIC2O95409 532 aaPredicted RBP0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 PRPF38BQ5VTL8 546 aaKnown RBP0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ALYREFQ86V81 257 aaKnown RBP0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SPATA18Q8TC71 538 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 NANOS1Q8WY41 292 aaKnown RBP0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KHSRPQ92945 711 aaKnown RBP eCLIP0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 TRIM52Q96A61 297 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CFAP44Q96MT7 982 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SENP3Q9H4L4 574 aaPredicted RBP0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ZSWIM6Q9HCJ5 1215 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 BICRAQ9NZM4 1560 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 LRP5O75197 1615 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 BIRC6Q9NR09 4857 aa0.77□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 PTPRTO14522 1441 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RGS12O14924 1447 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RGS19P49795 217 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HSPA2P54652 639 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 PIP4K2BP78356 416 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HABP4Q5JVS0 413 aaKnown RBP0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 SP7Q8TDD2 431 aaPredicted RBP0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 P2RX7Q99572 595 aaKnown RBP0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HNRNPABQ99729 332 aaKnown RBP0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KRTAP9-2Q9BYQ4 174 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CHD6Q8TD26 2715 aa0.76□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RYR3Q15413 4870 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 HMGXB3Q12766 1538 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ARAP1Q96P48 1450 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 LAMA2P24043 3122 aaKnown RBP0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CNTNAP5Q8WYK1 1306 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 BPTFQ12830 3046 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RGS20O76081 388 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KRTAP5-9P26371 169 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 UBXN11Q5T124 520 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 DNAJC5GQ8N7S2 189 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 GCC1Q96CN9 775 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 ABHD8Q96I13 439 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KRTAP4-8Q9BYQ9 185 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 RALYQ9UKM9 306 aaKnown RBP0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 CHD8Q9HCK8 2581 aa0.75□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 KDM5CP41229 1560 aa0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 BAZ1AQ9NRL2 1556 aaPredicted RBP0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 MAST4O15021 2626 aa0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 YEATS2Q9ULM3 1422 aa0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 EPPK1P58107 5090 aaKnown RBP0.74□□□□□ -2.29
RNU6ATAC11P-201ENST00000408541 TMEM265A0A087WTH1 108 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms