RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 PIP4P2Q8N4L2 257 aa16.26■□□□□ 0.19
PTPN12-202ENST00000407343 FAM212AQ96EL1 285 aa16.26■□□□□ 0.19
PTPN12-202ENST00000407343 CHRM1P11229 460 aaPredicted RBP16.16■□□□□ 0.18
PTPN12-202ENST00000407343 PLCB2Q00722 1185 aa16.11■□□□□ 0.17
PTPN12-202ENST00000407343 PYGBP11216 843 aa16.07■□□□□ 0.16
PTPN12-202ENST00000407343 TSPYL2Q9H2G4 693 aaPredicted RBP16.07■□□□□ 0.16
PTPN12-202ENST00000407343 RIOK3O14730 519 aaKnown RBP16.05■□□□□ 0.16
PTPN12-202ENST00000407343 BBXQ8WY36 941 aaPredicted RBP16.05■□□□□ 0.16
PTPN12-202ENST00000407343 CCDC61Q9Y6R9 512 aa16.04■□□□□ 0.16
PTPN12-202ENST00000407343 CHGAP10645 457 aaKnown RBP16.01■□□□□ 0.15
PTPN12-202ENST00000407343 HS6ST3Q8IZP7 471 aa16.01■□□□□ 0.15
PTPN12-202ENST00000407343 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.15
PTPN12-202ENST00000407343 VGFO15240 615 aaPredicted RBP15.94■□□□□ 0.14
PTPN12-202ENST00000407343 SGIP1Q9BQI5 828 aa15.94■□□□□ 0.14
PTPN12-202ENST00000407343 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.88■□□□□ 0.13
PTPN12-202ENST00000407343 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.87■□□□□ 0.13
PTPN12-202ENST00000407343 ZFP91Q96JP5 570 aaPredicted RBP15.87■□□□□ 0.13
PTPN12-202ENST00000407343 NKX1-1Q15270 411 aaPredicted RBP15.86■□□□□ 0.13
PTPN12-202ENST00000407343 TAOK2Q9UL54 1235 aa15.86■□□□□ 0.13
PTPN12-202ENST00000407343 CD44P16070 742 aaKnown RBP15.84■□□□□ 0.13
PTPN12-202ENST00000407343 PAXIP1Q6ZW49 1069 aaPredicted RBP15.84■□□□□ 0.13
PTPN12-202ENST00000407343 KIF12Q96FN5 646 aa15.83■□□□□ 0.12
PTPN12-202ENST00000407343 PCDHB8Q9UN66 801 aa15.83■□□□□ 0.12
PTPN12-202ENST00000407343 PCDHB13Q9Y5F0 798 aa15.83■□□□□ 0.12
PTPN12-202ENST00000407343 C19orf67A6NJJ6 358 aa15.82■□□□□ 0.12
PTPN12-202ENST00000407343 STK25O00506 426 aa15.82■□□□□ 0.12
PTPN12-202ENST00000407343 PAK3O75914 559 aaPredicted RBP15.82■□□□□ 0.12
PTPN12-202ENST00000407343 ZNF467Q7Z7K2 595 aaPredicted RBP15.82■□□□□ 0.12
PTPN12-202ENST00000407343 MAP3K13O43283 966 aa15.8■□□□□ 0.12
PTPN12-202ENST00000407343 ZNF579Q8NAF0 562 aaKnown RBP15.8■□□□□ 0.12
PTPN12-202ENST00000407343 ZRANB1Q9UGI0 708 aa15.8■□□□□ 0.12
PTPN12-202ENST00000407343 BCL11BQ9C0K0 894 aaPredicted RBP15.79■□□□□ 0.12
PTPN12-202ENST00000407343 HAP1P54257 671 aaPredicted RBP15.78■□□□□ 0.12
PTPN12-202ENST00000407343 CFAP44Q96MT7 982 aa15.78■□□□□ 0.12
PTPN12-202ENST00000407343 IFNL1Q8IU54 200 aa15.77■□□□□ 0.12
PTPN12-202ENST00000407343 SPRYD3Q8NCJ5 442 aa15.77■□□□□ 0.12
PTPN12-202ENST00000407343 PHF12Q96QT6 1004 aa15.76■□□□□ 0.11
PTPN12-202ENST00000407343 STK24Q9Y6E0 443 aa15.74■□□□□ 0.11
PTPN12-202ENST00000407343 PDAP1Q13442 181 aaKnown RBP15.73■□□□□ 0.11
PTPN12-202ENST00000407343 GTPBP6O43824 516 aaPredicted RBP15.71■□□□□ 0.11
PTPN12-202ENST00000407343 PSEN1P49768 467 aa15.68■□□□□ 0.1
PTPN12-202ENST00000407343 TSHZ2Q9NRE2 1034 aa15.64■□□□□ 0.09
PTPN12-202ENST00000407343 EVX2Q03828 476 aa15.62■□□□□ 0.09
PTPN12-202ENST00000407343 KDM2AQ9Y2K7 1162 aa15.61■□□□□ 0.09
PTPN12-202ENST00000407343 VSIG10Q8N0Z9 540 aa15.6■□□□□ 0.09
PTPN12-202ENST00000407343 MS4A3Q96HJ5 214 aa15.59■□□□□ 0.09
PTPN12-202ENST00000407343 TRPC6Q9Y210 931 aa15.58■□□□□ 0.08
PTPN12-202ENST00000407343 MFRPQ9BY79 579 aa15.52■□□□□ 0.08
PTPN12-202ENST00000407343 HAX1O00165 279 aa15.51■□□□□ 0.07
PTPN12-202ENST00000407343 EFCAB3Q8N7B9 438 aa15.48■□□□□ 0.07
PTPN12-202ENST00000407343 CABP2Q9NPB3 220 aa15.48■□□□□ 0.07
PTPN12-202ENST00000407343 GALR2O43603 387 aaPredicted RBP15.45■□□□□ 0.06
PTPN12-202ENST00000407343 FBXO22Q8NEZ5 403 aa15.45■□□□□ 0.06
PTPN12-202ENST00000407343 RYDENQ9NUL5 291 aaKnown RBP15.45■□□□□ 0.06
PTPN12-202ENST00000407343 TMEM106CQ9BVX2 250 aa15.42■□□□□ 0.06
PTPN12-202ENST00000407343 TIE1P35590 1138 aa15.4■□□□□ 0.06
PTPN12-202ENST00000407343 TTLL13PA6NNM8 815 aa15.38■□□□□ 0.05
PTPN12-202ENST00000407343 SOX12O15370 315 aa15.38■□□□□ 0.05
PTPN12-202ENST00000407343 POTEHQ6S545 545 aa15.38■□□□□ 0.05
PTPN12-202ENST00000407343 BMP2KQ9NSY1 1161 aaPredicted RBP15.38■□□□□ 0.05
PTPN12-202ENST00000407343 PHF8Q9UPP1 1060 aa15.38■□□□□ 0.05
PTPN12-202ENST00000407343 PPP1R37O75864 691 aa15.34■□□□□ 0.05
PTPN12-202ENST00000407343 MS4A4AQ96JQ5 239 aa15.34■□□□□ 0.05
PTPN12-202ENST00000407343 CLCN6P51797 869 aa15.33■□□□□ 0.04
PTPN12-202ENST00000407343 NLRP6P59044 892 aa15.32■□□□□ 0.04
PTPN12-202ENST00000407343 CADPS2Q86UW7 1296 aa15.31■□□□□ 0.04
PTPN12-202ENST00000407343 ILDR1Q86SU0 546 aaPredicted RBP15.29■□□□□ 0.04
PTPN12-202ENST00000407343 GABBR2O75899 941 aa15.24■□□□□ 0.03
PTPN12-202ENST00000407343 TRIM35Q9UPQ4 493 aa15.24■□□□□ 0.03
PTPN12-202ENST00000407343 ATMINO43313 823 aaPredicted RBP15.22■□□□□ 0.03
PTPN12-202ENST00000407343 ATN1P54259 1190 aaPredicted RBP15.22■□□□□ 0.03
PTPN12-202ENST00000407343 ASTLQ6HA08 431 aaPredicted RBP15.22■□□□□ 0.03
PTPN12-202ENST00000407343 GOLGA2Q08379 1002 aa15.2■□□□□ 0.02
PTPN12-202ENST00000407343 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
PTPN12-202ENST00000407343 BCANQ96GW7 911 aa15.13■□□□□ 0.01
PTPN12-202ENST00000407343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.011e-8■□□□□ 9.1
PTPN12-202ENST00000407343 PDCD7Q8N8D1 485 aaKnown RBP15.11■□□□□ 0.01
PTPN12-202ENST00000407343 IRX5P78411 483 aaPredicted RBP15.1■□□□□ 0.01
PTPN12-202ENST00000407343 PELP1Q8IZL8 1130 aaKnown RBP15.09■□□□□ 0.01
PTPN12-202ENST00000407343 DPY19L2Q6NUT2 758 aa15.08■□□□□ 0
PTPN12-202ENST00000407343 NCKAP5LQ9HCH0 1330 aa15.07■□□□□ 0
PTPN12-202ENST00000407343 IER5LQ5T953 404 aa15.06■□□□□ 0
PTPN12-202ENST00000407343 POTEIP0CG38 1075 aa15.03■□□□□ -0
PTPN12-202ENST00000407343 CRISPLD2Q9H0B8 497 aa15.01□□□□□ -0.01
PTPN12-202ENST00000407343 SP7Q8TDD2 431 aaPredicted RBP15□□□□□ -0.01
PTPN12-202ENST00000407343 OCEL1Q9H607 264 aa14.98□□□□□ -0.01
PTPN12-202ENST00000407343 KCNV2Q8TDN2 545 aa14.97□□□□□ -0.01
PTPN12-202ENST00000407343 POTEFA5A3E0 1075 aa14.96□□□□□ -0.01
PTPN12-202ENST00000407343 MFSD10Q14728 455 aa14.96□□□□□ -0.01
PTPN12-202ENST00000407343 DCBLD2Q96PD2 775 aa14.96□□□□□ -0.01
PTPN12-202ENST00000407343 MICALL2Q8IY33 904 aa14.95□□□□□ -0.02
PTPN12-202ENST00000407343 COLQQ9Y215 455 aaPredicted RBP14.95□□□□□ -0.02
PTPN12-202ENST00000407343 TMEM121BQ9BXQ6 578 aaPredicted RBP14.94□□□□□ -0.02
PTPN12-202ENST00000407343 WDR70Q9NW82 654 aa14.92□□□□□ -0.02
PTPN12-202ENST00000407343 PDE4AP27815 886 aa14.89□□□□□ -0.03
PTPN12-202ENST00000407343 P3H3Q8IVL6 736 aa14.89□□□□□ -0.03
PTPN12-202ENST00000407343 LARP6Q9BRS8 491 aaKnown RBP14.89□□□□□ -0.03
PTPN12-202ENST00000407343 PLCG2P16885 1265 aa14.88□□□□□ -0.03
PTPN12-202ENST00000407343 SLC39A7Q92504 469 aa14.87□□□□□ -0.03
PTPN12-202ENST00000407343 BOLA1Q9Y3E2 137 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms