RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 ZNF326Q5BKZ1 582 aaKnown RBP19.01■□□□□ 0.63
HMGA2-204ENST00000403681 DEKP35659 375 aaKnown RBP18.98■□□□□ 0.63
HMGA2-204ENST00000403681 B4GALNT3Q6L9W6 998 aa18.95■□□□□ 0.62
HMGA2-204ENST00000403681 TIMELESSQ9UNS1 1208 aa18.95■□□□□ 0.62
HMGA2-204ENST00000403681 NOP58Q9Y2X3 529 aaKnown RBP18.93■□□□□ 0.62
HMGA2-204ENST00000403681 RAB3GAP2Q9H2M9 1393 aa18.93■□□□□ 0.62
HMGA2-204ENST00000403681 EIF4G2P78344 907 aaKnown RBP eCLIP18.92■□□□□ 0.62
HMGA2-204ENST00000403681 EIF5BO60841 1220 aaKnown RBP18.89■□□□□ 0.61
HMGA2-204ENST00000403681 TOP2AP11388 1531 aaKnown RBP18.89■□□□□ 0.61
HMGA2-204ENST00000403681 SETD5Q9C0A6 1442 aa18.88■□□□□ 0.61
HMGA2-204ENST00000403681 CHIC2Q9UKJ5 165 aa18.86■□□□□ 0.61
HMGA2-204ENST00000403681 RAPGEF2Q9Y4G8 1499 aa18.86■□□□□ 0.61
HMGA2-204ENST00000403681 PPP1R15AO75807 674 aaPredicted RBP18.84■□□□□ 0.61
HMGA2-204ENST00000403681 KIF27Q86VH2 1401 aa18.82■□□□□ 0.6
HMGA2-204ENST00000403681 ERICH6BQ5W0A0 696 aa18.82■□□□□ 0.6
HMGA2-204ENST00000403681 TMC1Q8TDI8 760 aa18.81■□□□□ 0.6
HMGA2-204ENST00000403681 SMARCA4P51532 1647 aa18.81■□□□□ 0.6
HMGA2-204ENST00000403681 BAZ1BQ9UIG0 1483 aaKnown RBP18.81■□□□□ 0.6
HMGA2-204ENST00000403681 FANCIQ9NVI1 1328 aa18.8■□□□□ 0.6
HMGA2-204ENST00000403681 SALL2Q9Y467 1007 aaPredicted RBP18.8■□□□□ 0.6
HMGA2-204ENST00000403681 MTUS2Q5JR59 1369 aa18.79■□□□□ 0.6
HMGA2-204ENST00000403681 SENP3-EIF4A1A0A087X0R7 540 aa18.77■□□□□ 0.59
HMGA2-204ENST00000403681 RTN4Q9NQC3 1192 aaKnown RBP18.76■□□□□ 0.59
HMGA2-204ENST00000403681 RRP7BPQ9NSQ0 103 aa18.76■□□□□ 0.59
HMGA2-204ENST00000403681 ARID3CA6NKF2 412 aa18.76■□□□□ 0.59
HMGA2-204ENST00000403681 LAS1LQ9Y4W2 734 aaKnown RBP18.7■□□□□ 0.58
HMGA2-204ENST00000403681 HSPA5P11021 654 aaKnown RBP18.68■□□□□ 0.58
HMGA2-204ENST00000403681 NEFMP07197 916 aa18.68■□□□□ 0.58
HMGA2-204ENST00000403681 SMARCA2P51531 1590 aa18.66■□□□□ 0.58
HMGA2-204ENST00000403681 KIF21BO75037 1637 aa18.65■□□□□ 0.58
HMGA2-204ENST00000403681 PPM1GO15355 546 aaPredicted RBP18.63■□□□□ 0.57
HMGA2-204ENST00000403681 FHAD1B1AJZ9 1412 aa18.61■□□□□ 0.57
HMGA2-204ENST00000403681 ATAD2BQ9ULI0 1458 aa18.6■□□□□ 0.57
HMGA2-204ENST00000403681 IPO9Q96P70 1041 aaKnown RBP18.59■□□□□ 0.57
HMGA2-204ENST00000403681 DDRGK1Q96HY6 314 aa18.59■□□□□ 0.57
HMGA2-204ENST00000403681 SLC4A1APQ9BWU0 796 aaKnown RBP18.58■□□□□ 0.56
HMGA2-204ENST00000403681 MSH5O43196 834 aa18.58■□□□□ 0.56
HMGA2-204ENST00000403681 ZNF777Q9ULD5 760 aaPredicted RBP18.55■□□□□ 0.56
HMGA2-204ENST00000403681 CARMIL1Q5VZK9 1371 aa18.54■□□□□ 0.56
HMGA2-204ENST00000403681 ARHGAP35Q9NRY4 1499 aa18.53■□□□□ 0.56
HMGA2-204ENST00000403681 RRBP1Q9P2E9 1410 aaKnown RBP18.52■□□□□ 0.56
HMGA2-204ENST00000403681 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
HMGA2-204ENST00000403681 UNC13AQ9UPW8 1703 aa18.51■□□□□ 0.55
HMGA2-204ENST00000403681 CANXP27824 592 aaKnown RBP18.51■□□□□ 0.55
HMGA2-204ENST00000403681 CUX2O14529 1486 aa18.49■□□□□ 0.55
HMGA2-204ENST00000403681 KDM2AQ9Y2K7 1162 aa18.49■□□□□ 0.55
HMGA2-204ENST00000403681 NUDCQ9Y266 331 aa18.46■□□□□ 0.55
HMGA2-204ENST00000403681 PRKRIP1Q9H875 184 aaPredicted RBP18.46■□□□□ 0.55
HMGA2-204ENST00000403681 ZBED9Q6R2W3 1325 aa18.45■□□□□ 0.54
HMGA2-204ENST00000403681 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.44■□□□□ 0.54
HMGA2-204ENST00000403681 ARXQ96QS3 562 aa18.43■□□□□ 0.54
HMGA2-204ENST00000403681 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.43■□□□□ 0.54
HMGA2-204ENST00000403681 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
HMGA2-204ENST00000403681 GLIPR1L2Q4G1C9 344 aa18.43■□□□□ 0.54
HMGA2-204ENST00000403681 FOXD1Q16676 465 aa18.42■□□□□ 0.54
HMGA2-204ENST00000403681 TCERG1O14776 1098 aaKnown RBP18.42■□□□□ 0.54
HMGA2-204ENST00000403681 L3MBTL2Q969R5 705 aa18.41■□□□□ 0.54
HMGA2-204ENST00000403681 UPF2Q9HAU5 1272 aaKnown RBP18.39■□□□□ 0.53
HMGA2-204ENST00000403681 SYNJ1O43426 1573 aa18.39■□□□□ 0.53
HMGA2-204ENST00000403681 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
HMGA2-204ENST00000403681 PHLDB1Q86UU1 1377 aa18.38■□□□□ 0.53
HMGA2-204ENST00000403681 PAK3O75914 559 aaPredicted RBP18.38■□□□□ 0.53
HMGA2-204ENST00000403681 CARD11Q9BXL7 1154 aa18.37■□□□□ 0.53
HMGA2-204ENST00000403681 MPHOSPH9Q99550 1183 aa18.37■□□□□ 0.53
HMGA2-204ENST00000403681 FMN1Q68DA7 1419 aa18.36■□□□□ 0.53
HMGA2-204ENST00000403681 WDR43Q15061 677 aaKnown RBP eCLIP18.35■□□□□ 0.53
HMGA2-204ENST00000403681 RCAN3Q9UKA8 241 aa18.34■□□□□ 0.53
HMGA2-204ENST00000403681 USP35Q9P2H5 1018 aa18.33■□□□□ 0.53
HMGA2-204ENST00000403681 WASHC2AQ641Q2 1341 aa18.33■□□□□ 0.52
HMGA2-204ENST00000403681 RGS3P49796 1198 aa18.31■□□□□ 0.52
HMGA2-204ENST00000403681 FHOD3Q2V2M9 1422 aa18.31■□□□□ 0.52
HMGA2-204ENST00000403681 CCDC18Q5T9S5 1454 aa18.3■□□□□ 0.52
HMGA2-204ENST00000403681 ANO8Q9HCE9 1232 aaPredicted RBP18.3■□□□□ 0.52
HMGA2-204ENST00000403681 PDE4AP27815 886 aa18.29■□□□□ 0.52
HMGA2-204ENST00000403681 BECN1Q14457 450 aa18.29■□□□□ 0.52
HMGA2-204ENST00000403681 LRRC9Q6ZRR7 1453 aa18.27■□□□□ 0.52
HMGA2-204ENST00000403681 ERICH3Q5RHP9 1530 aa18.27■□□□□ 0.51
HMGA2-204ENST00000403681 PRXQ9BXM0 1461 aa18.27■□□□□ 0.51
HMGA2-204ENST00000403681 CCDC184Q52MB2 194 aa18.26■□□□□ 0.51
HMGA2-204ENST00000403681 EIF4G1Q04637 1599 aaKnown RBP18.25■□□□□ 0.51
HMGA2-204ENST00000403681 PRKCSHP14314 528 aaPredicted RBP18.24■□□□□ 0.51
HMGA2-204ENST00000403681 EXOC6Q8TAG9 804 aa18.24■□□□□ 0.51
HMGA2-204ENST00000403681 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
HMGA2-204ENST00000403681 TSPY4P0CV99 314 aa18.23■□□□□ 0.51
HMGA2-204ENST00000403681 TSPY10P0CW01 314 aa18.23■□□□□ 0.51
HMGA2-204ENST00000403681 UACAQ9BZF9 1416 aa18.22■□□□□ 0.51
HMGA2-204ENST00000403681 CCDC7Q96M83 1385 aa18.22■□□□□ 0.51
HMGA2-204ENST00000403681 IL27Q8NEV9 243 aa18.22■□□□□ 0.51
HMGA2-204ENST00000403681 FBLN2P98095 1184 aa18.21■□□□□ 0.51
HMGA2-204ENST00000403681 IGF1RP08069 1367 aa18.2■□□□□ 0.5
HMGA2-204ENST00000403681 RGL3Q3MIN7 710 aa18.2■□□□□ 0.5
HMGA2-204ENST00000403681 CC2D1BQ5T0F9 858 aaKnown RBP18.2■□□□□ 0.5
HMGA2-204ENST00000403681 GSE1Q14687 1217 aa18.19■□□□□ 0.5
HMGA2-204ENST00000403681 CFDP1Q9UEE9 299 aaPredicted RBP18.19■□□□□ 0.5
HMGA2-204ENST00000403681 RRP1P56182 461 aaKnown RBP18.19■□□□□ 0.5
HMGA2-204ENST00000403681 NCAPD3P42695 1498 aa18.18■□□□□ 0.5
HMGA2-204ENST00000403681 HSP90AA1P07900 732 aaKnown RBP18.18■□□□□ 0.5
HMGA2-204ENST00000403681 ANP32BQ92688 251 aaKnown RBP18.17■□□□□ 0.5
HMGA2-204ENST00000403681 RALBP1Q15311 655 aa18.17■□□□□ 0.5
HMGA2-204ENST00000403681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.17■□□□□ 0.51e-6■□□□□ 10.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms