RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 ZRANB1Q9UGI0 708 aa13.9□□□□□ -0.18
CEACAM1-208ENST00000403461 RTN4Q9NQC3 1192 aaKnown RBP13.87□□□□□ -0.19
CEACAM1-208ENST00000403461 CLCN6P51797 869 aa13.86□□□□□ -0.19
CEACAM1-208ENST00000403461 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
CEACAM1-208ENST00000403461 ZCCHC6Q5VYS8 1495 aaKnown RBP13.86□□□□□ -0.19
CEACAM1-208ENST00000403461 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
CEACAM1-208ENST00000403461 CECR2Q9BXF3 1484 aa13.85□□□□□ -0.19
CEACAM1-208ENST00000403461 ZNF579Q8NAF0 562 aaKnown RBP13.82□□□□□ -0.2
CEACAM1-208ENST00000403461 ZBTB47Q9UFB7 747 aaPredicted RBP13.82□□□□□ -0.2
CEACAM1-208ENST00000403461 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
CEACAM1-208ENST00000403461 LHX8Q68G74 356 aa13.81□□□□□ -0.2
CEACAM1-208ENST00000403461 DCBLD2Q96PD2 775 aa13.8□□□□□ -0.2
CEACAM1-208ENST00000403461 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
CEACAM1-208ENST00000403461 POTEIP0CG38 1075 aa13.78□□□□□ -0.2
CEACAM1-208ENST00000403461 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
CEACAM1-208ENST00000403461 CC2D2AQ9P2K1 1620 aa13.77□□□□□ -0.21
CEACAM1-208ENST00000403461 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
CEACAM1-208ENST00000403461 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
CEACAM1-208ENST00000403461 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
CEACAM1-208ENST00000403461 GALR2O43603 387 aaPredicted RBP13.69□□□□□ -0.22
CEACAM1-208ENST00000403461 PHF12Q96QT6 1004 aa13.69□□□□□ -0.22
CEACAM1-208ENST00000403461 NUBP1P53384 320 aa13.59□□□□□ -0.23
CEACAM1-208ENST00000403461 PKD2Q13563 968 aa13.57□□□□□ -0.24
CEACAM1-208ENST00000403461 TSPYL2Q9H2G4 693 aaPredicted RBP13.57□□□□□ -0.24
CEACAM1-208ENST00000403461 CIZ1Q9ULV3 898 aaPredicted RBP13.52□□□□□ -0.25
CEACAM1-208ENST00000403461 GSE1Q14687 1217 aa13.5□□□□□ -0.25
CEACAM1-208ENST00000403461 DNAJC5Q9H3Z4 198 aa13.5□□□□□ -0.25
CEACAM1-208ENST00000403461 MS4A3Q96HJ5 214 aa13.48□□□□□ -0.25
CEACAM1-208ENST00000403461 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
CEACAM1-208ENST00000403461 RASEFQ8IZ41 740 aa13.47□□□□□ -0.25
CEACAM1-208ENST00000403461 FAM212AQ96EL1 285 aa13.47□□□□□ -0.25
CEACAM1-208ENST00000403461 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
CEACAM1-208ENST00000403461 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
CEACAM1-208ENST00000403461 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
CEACAM1-208ENST00000403461 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
CEACAM1-208ENST00000403461 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
CEACAM1-208ENST00000403461 ASTLQ6HA08 431 aaPredicted RBP13.36□□□□□ -0.27
CEACAM1-208ENST00000403461 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
CEACAM1-208ENST00000403461 METRNQ9UJH8 293 aa13.34□□□□□ -0.27
CEACAM1-208ENST00000403461 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
CEACAM1-208ENST00000403461 SLC39A7Q92504 469 aa13.32□□□□□ -0.28
CEACAM1-208ENST00000403461 CUX2O14529 1486 aa13.31□□□□□ -0.28
CEACAM1-208ENST00000403461 ERCC6Q03468 1493 aa13.31□□□□□ -0.28
CEACAM1-208ENST00000403461 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
CEACAM1-208ENST00000403461 RGL2O15211 777 aa13.3□□□□□ -0.28
CEACAM1-208ENST00000403461 MAP3K13O43283 966 aa13.3□□□□□ -0.28
CEACAM1-208ENST00000403461 C7P10643 843 aa13.3□□□□□ -0.28
CEACAM1-208ENST00000403461 OTUD5Q96G74 571 aa13.3□□□□□ -0.28
CEACAM1-208ENST00000403461 NCAPD3P42695 1498 aa13.27□□□□□ -0.29
CEACAM1-208ENST00000403461 ATN1P54259 1190 aaPredicted RBP13.26□□□□□ -0.29
CEACAM1-208ENST00000403461 PYGBP11216 843 aa13.25□□□□□ -0.29
CEACAM1-208ENST00000403461 TRPC6Q9Y210 931 aa13.24□□□□□ -0.29
CEACAM1-208ENST00000403461 BMP2KQ9NSY1 1161 aaPredicted RBP13.23□□□□□ -0.29
CEACAM1-208ENST00000403461 RNF25Q96BH1 459 aaPredicted RBP13.21□□□□□ -0.29
CEACAM1-208ENST00000403461 ATAD2BQ9ULI0 1458 aa13.2□□□□□ -0.3
CEACAM1-208ENST00000403461 TIE1P35590 1138 aa13.19□□□□□ -0.3
CEACAM1-208ENST00000403461 RIOK3O14730 519 aaKnown RBP13.18□□□□□ -0.3
CEACAM1-208ENST00000403461 PCDHB13Q9Y5F0 798 aa13.18□□□□□ -0.3
CEACAM1-208ENST00000403461 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
CEACAM1-208ENST00000403461 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
CEACAM1-208ENST00000403461 MAMSTRQ6ZN01 415 aa13.14□□□□□ -0.31
CEACAM1-208ENST00000403461 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
CEACAM1-208ENST00000403461 TTLL13PA6NNM8 815 aa13.13□□□□□ -0.31
CEACAM1-208ENST00000403461 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
CEACAM1-208ENST00000403461 SGIP1Q9BQI5 828 aa13.12□□□□□ -0.31
CEACAM1-208ENST00000403461 VGFO15240 615 aaPredicted RBP13.11□□□□□ -0.31
CEACAM1-208ENST00000403461 ZNF467Q7Z7K2 595 aaPredicted RBP13.11□□□□□ -0.31
CEACAM1-208ENST00000403461 SEC24BO95487 1268 aa13.09□□□□□ -0.31
CEACAM1-208ENST00000403461 SCUBE2Q9NQ36 999 aa13.09□□□□□ -0.31
CEACAM1-208ENST00000403461 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
CEACAM1-208ENST00000403461 IFNL1Q8IU54 200 aa13.08□□□□□ -0.32
CEACAM1-208ENST00000403461 SMARCA4P51532 1647 aa13.08□□□□□ -0.32
CEACAM1-208ENST00000403461 CHGAP10645 457 aaKnown RBP13.07□□□□□ -0.32
CEACAM1-208ENST00000403461 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
CEACAM1-208ENST00000403461 BAZ1AQ9NRL2 1556 aaPredicted RBP13.06□□□□□ -0.32
CEACAM1-208ENST00000403461 NESP48681 1621 aa13.06□□□□□ -0.32
CEACAM1-208ENST00000403461 POTEFA5A3E0 1075 aa13.05□□□□□ -0.32
CEACAM1-208ENST00000403461 PCDHB8Q9UN66 801 aa13.05□□□□□ -0.32
CEACAM1-208ENST00000403461 HS6ST3Q8IZP7 471 aa13.04□□□□□ -0.32
CEACAM1-208ENST00000403461 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
CEACAM1-208ENST00000403461 TMEM106CQ9BVX2 250 aa13.03□□□□□ -0.32
CEACAM1-208ENST00000403461 PLSCR2Q9NRY7 297 aa13.03□□□□□ -0.32
CEACAM1-208ENST00000403461 COLQQ9Y215 455 aaPredicted RBP13.02□□□□□ -0.33
CEACAM1-208ENST00000403461 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.01□□□□□ -0.33
CEACAM1-208ENST00000403461 ZFP91Q96JP5 570 aaPredicted RBP13.01□□□□□ -0.33
CEACAM1-208ENST00000403461 POTEMA6NI47 508 aa13□□□□□ -0.33
CEACAM1-208ENST00000403461 PDAP1Q13442 181 aaKnown RBP13□□□□□ -0.33
CEACAM1-208ENST00000403461 PDS5BQ9NTI5 1447 aa12.99□□□□□ -0.33
CEACAM1-208ENST00000403461 STK25O00506 426 aa12.99□□□□□ -0.33
CEACAM1-208ENST00000403461 IER5LQ5T953 404 aa12.99□□□□□ -0.33
CEACAM1-208ENST00000403461 POTEGQ6S5H5 508 aa12.97□□□□□ -0.33
CEACAM1-208ENST00000403461 LAMC3Q9Y6N6 1575 aa12.97□□□□□ -0.33
CEACAM1-208ENST00000403461 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
CEACAM1-208ENST00000403461 PSEN1P49768 467 aa12.96□□□□□ -0.33
CEACAM1-208ENST00000403461 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
CEACAM1-208ENST00000403461 BCL11BQ9C0K0 894 aaPredicted RBP12.95□□□□□ -0.34
CEACAM1-208ENST00000403461 FAM163AQ96GL9 167 aaPredicted RBP12.94□□□□□ -0.34
CEACAM1-208ENST00000403461 STK24Q9Y6E0 443 aa12.93□□□□□ -0.34
CEACAM1-208ENST00000403461 THOC2Q8NI27 1593 aaKnown RBP12.93□□□□□ -0.34
CEACAM1-208ENST00000403461 PLCG2P16885 1265 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms