RNA–Protein interactions for RNA: ENST00000399562.8

C22orf39-202, Transcript of chromosome 22 open reading frame 39, humanhuman

TSL 1 (best) BASIC

Gene C22orf39, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C22orf39-202ENST00000399562 ZNF316A6NFI3 1004 aaPredicted RBP16.95■□□□□ 0.3
C22orf39-202ENST00000399562 DHX37Q8IY37 1157 aaKnown RBP16.92■□□□□ 0.3
C22orf39-202ENST00000399562 SMARCA2P51531 1590 aa16.89■□□□□ 0.29
C22orf39-202ENST00000399562 SOGA1O94964 1423 aa16.85■□□□□ 0.29
C22orf39-202ENST00000399562 ATP1B4Q9UN42 357 aaPredicted RBP16.85■□□□□ 0.29
C22orf39-202ENST00000399562 WRNQ14191 1432 aaPredicted RBP eCLIP16.83■□□□□ 0.285e-6■■□□□ 12.5
C22orf39-202ENST00000399562 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.28
C22orf39-202ENST00000399562 TAF7LQ5H9L4 462 aa16.8■□□□□ 0.28
C22orf39-202ENST00000399562 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
C22orf39-202ENST00000399562 EIF4G1Q04637 1599 aaKnown RBP16.74■□□□□ 0.27
C22orf39-202ENST00000399562 BRPF3Q9ULD4 1205 aa16.74■□□□□ 0.27
C22orf39-202ENST00000399562 RUSC2Q8N2Y8 1516 aa16.73■□□□□ 0.27
C22orf39-202ENST00000399562 TULP1O00294 542 aaPredicted RBP16.72■□□□□ 0.27
C22orf39-202ENST00000399562 CDK11AQ9UQ88 783 aaPredicted RBP16.7■□□□□ 0.26
C22orf39-202ENST00000399562 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
C22orf39-202ENST00000399562 ARXQ96QS3 562 aa16.7■□□□□ 0.26
C22orf39-202ENST00000399562 CHMP4BQ9H444 224 aaKnown RBP16.68■□□□□ 0.26
C22orf39-202ENST00000399562 NOP58Q9Y2X3 529 aaKnown RBP16.67■□□□□ 0.26
C22orf39-202ENST00000399562 RSPH6AQ9H0K4 717 aa16.66■□□□□ 0.26
C22orf39-202ENST00000399562 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
C22orf39-202ENST00000399562 NAP1L5Q96NT1 182 aaPredicted RBP16.65■□□□□ 0.26
C22orf39-202ENST00000399562 CHMP4AQ9BY43 222 aa16.64■□□□□ 0.26
C22orf39-202ENST00000399562 IRX6P78412 446 aaPredicted RBP16.64■□□□□ 0.25
C22orf39-202ENST00000399562 NCAPD3P42695 1498 aa16.64■□□□□ 0.25
C22orf39-202ENST00000399562 PAK3O75914 559 aaPredicted RBP16.63■□□□□ 0.25
C22orf39-202ENST00000399562 HSP90AA2PQ14568 343 aaPredicted RBP16.61■□□□□ 0.25
C22orf39-202ENST00000399562 ARID4BQ4LE39 1312 aaPredicted RBP16.6■□□□□ 0.25
C22orf39-202ENST00000399562 NAP1L2Q9ULW6 460 aaPredicted RBP16.6■□□□□ 0.25
C22orf39-202ENST00000399562 CEP162Q5TB80 1403 aa16.59■□□□□ 0.25
C22orf39-202ENST00000399562 NEFMP07197 916 aa16.58■□□□□ 0.25
C22orf39-202ENST00000399562 BBXQ8WY36 941 aaPredicted RBP16.58■□□□□ 0.24
C22orf39-202ENST00000399562 PEG3Q9GZU2 1588 aa16.58■□□□□ 0.24
C22orf39-202ENST00000399562 P3H3Q8IVL6 736 aa16.57■□□□□ 0.24
C22orf39-202ENST00000399562 AMER1Q5JTC6 1135 aaPredicted RBP16.54■□□□□ 0.24
C22orf39-202ENST00000399562 FBLN2P98095 1184 aa16.53■□□□□ 0.24
C22orf39-202ENST00000399562 EEA1Q15075 1411 aa16.51■□□□□ 0.23
C22orf39-202ENST00000399562 CADPSQ9ULU8 1353 aa16.5■□□□□ 0.23
C22orf39-202ENST00000399562 C11orf95C9JLR9 678 aaPredicted RBP16.49■□□□□ 0.23
C22orf39-202ENST00000399562 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
C22orf39-202ENST00000399562 TNIKQ9UKE5 1360 aa16.49■□□□□ 0.23
C22orf39-202ENST00000399562 USP35Q9P2H5 1018 aa16.48■□□□□ 0.23
C22orf39-202ENST00000399562 GOLGA3Q08378 1498 aa16.47■□□□□ 0.23
C22orf39-202ENST00000399562 RGS3P49796 1198 aa16.47■□□□□ 0.23
C22orf39-202ENST00000399562 LAS1LQ9Y4W2 734 aaKnown RBP16.47■□□□□ 0.23
C22orf39-202ENST00000399562 CC2D2AQ9P2K1 1620 aa16.46■□□□□ 0.23
C22orf39-202ENST00000399562 PLCD3Q8N3E9 789 aa16.44■□□□□ 0.22
C22orf39-202ENST00000399562 ARID3CA6NKF2 412 aa16.43■□□□□ 0.22
C22orf39-202ENST00000399562 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
C22orf39-202ENST00000399562 CLIP1P30622 1438 aa16.42■□□□□ 0.22
C22orf39-202ENST00000399562 CEP164Q9UPV0 1460 aa16.41■□□□□ 0.22
C22orf39-202ENST00000399562 HSP90AA1P07900 732 aaKnown RBP16.4■□□□□ 0.22
C22orf39-202ENST00000399562 ZBTB47Q9UFB7 747 aaPredicted RBP16.4■□□□□ 0.22
C22orf39-202ENST00000399562 CFTRP13569 1480 aa16.4■□□□□ 0.22
C22orf39-202ENST00000399562 RAPGEF2Q9Y4G8 1499 aa16.39■□□□□ 0.21
C22orf39-202ENST00000399562 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
C22orf39-202ENST00000399562 BRD2P25440 801 aaKnown RBP16.39■□□□□ 0.21
C22orf39-202ENST00000399562 C14orf37Q86TY3 774 aa16.38■□□□□ 0.21
C22orf39-202ENST00000399562 NESP48681 1621 aa16.38■□□□□ 0.21
C22orf39-202ENST00000399562 CUX2O14529 1486 aa16.36■□□□□ 0.21
C22orf39-202ENST00000399562 KCNH8Q96L42 1107 aa16.35■□□□□ 0.21
C22orf39-202ENST00000399562 CANXP27824 592 aaKnown RBP16.35■□□□□ 0.21
C22orf39-202ENST00000399562 ANP32AP39687 249 aaKnown RBP16.33■□□□□ 0.2
C22orf39-202ENST00000399562 NPM2Q86SE8 214 aaKnown RBP16.33■□□□□ 0.2
C22orf39-202ENST00000399562 HOMEZQ8IX15 550 aa16.33■□□□□ 0.2
C22orf39-202ENST00000399562 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
C22orf39-202ENST00000399562 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
C22orf39-202ENST00000399562 CUX1P39880 1505 aa16.31■□□□□ 0.2
C22orf39-202ENST00000399562 TRIM52Q96A61 297 aa16.29■□□□□ 0.2
C22orf39-202ENST00000399562 ZNF326Q5BKZ1 582 aaKnown RBP16.28■□□□□ 0.2
C22orf39-202ENST00000399562 ZFP91Q96JP5 570 aaPredicted RBP16.28■□□□□ 0.2
C22orf39-202ENST00000399562 RRP9O43818 475 aaKnown RBP16.27■□□□□ 0.19
C22orf39-202ENST00000399562 FOXD1Q16676 465 aa16.26■□□□□ 0.19
C22orf39-202ENST00000399562 CNGB1Q14028 1251 aaPredicted RBP16.26■□□□□ 0.19
C22orf39-202ENST00000399562 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
C22orf39-202ENST00000399562 CARMIL1Q5VZK9 1371 aa16.25■□□□□ 0.19
C22orf39-202ENST00000399562 TOP2BQ02880 1626 aa16.24■□□□□ 0.19
C22orf39-202ENST00000399562 VGLL3A8MV65 326 aa16.23■□□□□ 0.19
C22orf39-202ENST00000399562 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
C22orf39-202ENST00000399562 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
C22orf39-202ENST00000399562 GTF2E1P29083 439 aaPredicted RBP16.23■□□□□ 0.19
C22orf39-202ENST00000399562 RSPH4AQ5TD94 716 aa16.21■□□□□ 0.18
C22orf39-202ENST00000399562 ARID3AQ99856 593 aa16.21■□□□□ 0.18
C22orf39-202ENST00000399562 IGF1RP08069 1367 aa16.2■□□□□ 0.18
C22orf39-202ENST00000399562 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
C22orf39-202ENST00000399562 ERCC6Q03468 1493 aa16.18■□□□□ 0.18
C22orf39-202ENST00000399562 ZHX1Q9UKY1 873 aaPredicted RBP16.17■□□□□ 0.18
C22orf39-202ENST00000399562 KANK4Q5T7N3 995 aaPredicted RBP16.17■□□□□ 0.18
C22orf39-202ENST00000399562 FAM43AQ8N2R8 423 aa16.17■□□□□ 0.18
C22orf39-202ENST00000399562 PDS5BQ9NTI5 1447 aa16.16■□□□□ 0.18
C22orf39-202ENST00000399562 IPO4Q8TEX9 1081 aaKnown RBP16.16■□□□□ 0.18
C22orf39-202ENST00000399562 POLR3GLQ9BT43 218 aa16.16■□□□□ 0.18
C22orf39-202ENST00000399562 GSE1Q14687 1217 aa16.15■□□□□ 0.18
C22orf39-202ENST00000399562 FAM50AQ14320 339 aaKnown RBP16.14■□□□□ 0.17
C22orf39-202ENST00000399562 VPS8Q8N3P4 1428 aa16.14■□□□□ 0.17
C22orf39-202ENST00000399562 IPO9Q96P70 1041 aaKnown RBP16.14■□□□□ 0.17
C22orf39-202ENST00000399562 STAC3Q96MF2 364 aa16.13■□□□□ 0.17
C22orf39-202ENST00000399562 SECISBP2LQ93073 1101 aaKnown RBP16.13■□□□□ 0.17
C22orf39-202ENST00000399562 PNNQ9H307 717 aaKnown RBP16.12■□□□□ 0.17
C22orf39-202ENST00000399562 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
C22orf39-202ENST00000399562 FRAT1Q92837 279 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms