RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 KLHL34Q8N239 644 aa7.35□□□□□ -1.23
RPS4XP3-201ENST00000398541 CCDC61Q9Y6R9 512 aa7.34□□□□□ -1.23
RPS4XP3-201ENST00000398541 GALR2O43603 387 aaPredicted RBP7.32□□□□□ -1.24
RPS4XP3-201ENST00000398541 FAM212AQ96EL1 285 aa7.31□□□□□ -1.24
RPS4XP3-201ENST00000398541 IFNLR1Q8IU57 520 aaPredicted RBP7.3□□□□□ -1.24
RPS4XP3-201ENST00000398541 DCBLD2Q96PD2 775 aa7.29□□□□□ -1.24
RPS4XP3-201ENST00000398541 POTEIP0CG38 1075 aa7.28□□□□□ -1.24
RPS4XP3-201ENST00000398541 KIF12Q96FN5 646 aa7.28□□□□□ -1.24
RPS4XP3-201ENST00000398541 MS4A3Q96HJ5 214 aa7.28□□□□□ -1.24
RPS4XP3-201ENST00000398541 DCAF8Q5TAQ9 597 aa7.27□□□□□ -1.25
RPS4XP3-201ENST00000398541 MAP3K13O43283 966 aa7.26□□□□□ -1.25
RPS4XP3-201ENST00000398541 SPOCK2Q92563 424 aa7.24□□□□□ -1.25
RPS4XP3-201ENST00000398541 GSE1Q14687 1217 aa7.22□□□□□ -1.25
RPS4XP3-201ENST00000398541 SGIP1Q9BQI5 828 aa7.21□□□□□ -1.26
RPS4XP3-201ENST00000398541 PCDHB13Q9Y5F0 798 aa7.21□□□□□ -1.26
RPS4XP3-201ENST00000398541 PYGBP11216 843 aa7.2□□□□□ -1.26
RPS4XP3-201ENST00000398541 TRPC6Q9Y210 931 aa7.19□□□□□ -1.26
RPS4XP3-201ENST00000398541 ATMINO43313 823 aaPredicted RBP7.18□□□□□ -1.26
RPS4XP3-201ENST00000398541 ASTLQ6HA08 431 aaPredicted RBP7.18□□□□□ -1.26
RPS4XP3-201ENST00000398541 IFNL1Q8IU54 200 aa7.18□□□□□ -1.26
RPS4XP3-201ENST00000398541 CIZ1Q9ULV3 898 aaPredicted RBP7.18□□□□□ -1.26
RPS4XP3-201ENST00000398541 PELP1Q8IZL8 1130 aaKnown RBP7.17□□□□□ -1.26
RPS4XP3-201ENST00000398541 BMP2KQ9NSY1 1161 aaPredicted RBP7.16□□□□□ -1.26
RPS4XP3-201ENST00000398541 TIE1P35590 1138 aa7.15□□□□□ -1.26
RPS4XP3-201ENST00000398541 CHRM1P11229 460 aaPredicted RBP7.14□□□□□ -1.27
RPS4XP3-201ENST00000398541 ATN1P54259 1190 aaPredicted RBP7.14□□□□□ -1.27
RPS4XP3-201ENST00000398541 AMER1Q5JTC6 1135 aaPredicted RBP7.14□□□□□ -1.27
RPS4XP3-201ENST00000398541 RTN4Q9NQC3 1192 aaKnown RBP7.14□□□□□ -1.27
RPS4XP3-201ENST00000398541 TTLL13PA6NNM8 815 aa7.13□□□□□ -1.27
RPS4XP3-201ENST00000398541 LHX8Q68G74 356 aa7.13□□□□□ -1.27
RPS4XP3-201ENST00000398541 PCDHB8Q9UN66 801 aa7.12□□□□□ -1.27
RPS4XP3-201ENST00000398541 SLC39A7Q92504 469 aa7.11□□□□□ -1.27
RPS4XP3-201ENST00000398541 C7P10643 843 aa7.1□□□□□ -1.27
RPS4XP3-201ENST00000398541 ZNF467Q7Z7K2 595 aaPredicted RBP7.1□□□□□ -1.27
RPS4XP3-201ENST00000398541 TMEM106CQ9BVX2 250 aa7.1□□□□□ -1.27
RPS4XP3-201ENST00000398541 METRNQ9UJH8 293 aa7.1□□□□□ -1.27
RPS4XP3-201ENST00000398541 TRIM35Q9UPQ4 493 aa7.09□□□□□ -1.27
RPS4XP3-201ENST00000398541 TRIM41Q8WV44 630 aa7.08□□□□□ -1.28
RPS4XP3-201ENST00000398541 POTEB2H3BUK9 544 aa7.05□□□□□ -1.28
RPS4XP3-201ENST00000398541 PSEN1P49768 467 aa7.04□□□□□ -1.28
RPS4XP3-201ENST00000398541 IER5LQ5T953 404 aa7.04□□□□□ -1.28
RPS4XP3-201ENST00000398541 PDAP1Q13442 181 aaKnown RBP7.03□□□□□ -1.28
RPS4XP3-201ENST00000398541 POTEFA5A3E0 1075 aa7.02□□□□□ -1.29
RPS4XP3-201ENST00000398541 SEC24BO95487 1268 aa7.02□□□□□ -1.29
RPS4XP3-201ENST00000398541 COLQQ9Y215 455 aaPredicted RBP7.02□□□□□ -1.29
RPS4XP3-201ENST00000398541 GOLGA2Q08379 1002 aa6.99□□□□□ -1.29
RPS4XP3-201ENST00000398541 RNF25Q96BH1 459 aaPredicted RBP6.99□□□□□ -1.29
RPS4XP3-201ENST00000398541 RIOK3O14730 519 aaKnown RBP6.98□□□□□ -1.29
RPS4XP3-201ENST00000398541 POTEJP0CG39 1038 aa6.98□□□□□ -1.29
RPS4XP3-201ENST00000398541 OTUD5Q96G74 571 aa6.98□□□□□ -1.29
RPS4XP3-201ENST00000398541 ECM2O94769 699 aaPredicted RBP6.97□□□□□ -1.29
RPS4XP3-201ENST00000398541 PLCG2P16885 1265 aa6.97□□□□□ -1.29
RPS4XP3-201ENST00000398541 IRX5P78411 483 aaPredicted RBP6.97□□□□□ -1.29
RPS4XP3-201ENST00000398541 PKD2Q13563 968 aa6.97□□□□□ -1.29
RPS4XP3-201ENST00000398541 MKRN3Q13064 507 aaKnown RBP6.96□□□□□ -1.3
RPS4XP3-201ENST00000398541 OCEL1Q9H607 264 aa6.96□□□□□ -1.3
RPS4XP3-201ENST00000398541 MAMSTRQ6ZN01 415 aa6.95□□□□□ -1.3
RPS4XP3-201ENST00000398541 CABP2Q9NPB3 220 aa6.95□□□□□ -1.3
RPS4XP3-201ENST00000398541 VGFO15240 615 aaPredicted RBP6.94□□□□□ -1.3
RPS4XP3-201ENST00000398541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.92□□□□□ -1.3
RPS4XP3-201ENST00000398541 ZFP91Q96JP5 570 aaPredicted RBP6.92□□□□□ -1.3
RPS4XP3-201ENST00000398541 SCUBE2Q9NQ36 999 aa6.92□□□□□ -1.3
RPS4XP3-201ENST00000398541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.92□□□□□ -1.3
RPS4XP3-201ENST00000398541 RGL2O15211 777 aa6.91□□□□□ -1.3
RPS4XP3-201ENST00000398541 TAOK2Q9UL54 1235 aa6.91□□□□□ -1.3
RPS4XP3-201ENST00000398541 PDCD7Q8N8D1 485 aaKnown RBP6.9□□□□□ -1.3
RPS4XP3-201ENST00000398541 EFCAB3Q8N7B9 438 aa6.89□□□□□ -1.31
RPS4XP3-201ENST00000398541 ILDR1Q86SU0 546 aaPredicted RBP6.88□□□□□ -1.31
RPS4XP3-201ENST00000398541 BCL11BQ9C0K0 894 aaPredicted RBP6.87□□□□□ -1.31
RPS4XP3-201ENST00000398541 STK25O00506 426 aa6.85□□□□□ -1.31
RPS4XP3-201ENST00000398541 DPY19L2Q6NUT2 758 aa6.85□□□□□ -1.31
RPS4XP3-201ENST00000398541 L3MBTL3Q96JM7 780 aaPredicted RBP6.85□□□□□ -1.31
RPS4XP3-201ENST00000398541 STK24Q9Y6E0 443 aa6.85□□□□□ -1.31
RPS4XP3-201ENST00000398541 SOX12O15370 315 aa6.83□□□□□ -1.32
RPS4XP3-201ENST00000398541 SLAIN1Q8ND83 568 aa6.83□□□□□ -1.32
RPS4XP3-201ENST00000398541 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.82□□□□□ -1.32
RPS4XP3-201ENST00000398541 C3orf67Q6ZVT6 689 aa6.81□□□□□ -1.32
RPS4XP3-201ENST00000398541 PHF8Q9UPP1 1060 aa6.81□□□□□ -1.32
RPS4XP3-201ENST00000398541 G3V3G9 751 aa6.8□□□□□ -1.32
RPS4XP3-201ENST00000398541 BOLA1Q9Y3E2 137 aa6.8□□□□□ -1.32
RPS4XP3-201ENST00000398541 MS4A4AQ96JQ5 239 aa6.79□□□□□ -1.32
RPS4XP3-201ENST00000398541 NLRP6P59044 892 aa6.78□□□□□ -1.32
RPS4XP3-201ENST00000398541 FBXO22Q8NEZ5 403 aa6.77□□□□□ -1.33
RPS4XP3-201ENST00000398541 FAM163AQ96GL9 167 aaPredicted RBP6.77□□□□□ -1.33
RPS4XP3-201ENST00000398541 MFRPQ9BY79 579 aa6.77□□□□□ -1.33
RPS4XP3-201ENST00000398541 CHGAP10645 457 aaKnown RBP6.76□□□□□ -1.33
RPS4XP3-201ENST00000398541 TMEM121BQ9BXQ6 578 aaPredicted RBP6.76□□□□□ -1.33
RPS4XP3-201ENST00000398541 HS6ST3Q8IZP7 471 aa6.75□□□□□ -1.33
RPS4XP3-201ENST00000398541 MICALL2Q8IY33 904 aa6.74□□□□□ -1.33
RPS4XP3-201ENST00000398541 LCE2DQ5TA82 110 aaPredicted RBP6.72□□□□□ -1.33
RPS4XP3-201ENST00000398541 SNPHO15079 494 aa6.71□□□□□ -1.34
RPS4XP3-201ENST00000398541 DCAF8L2P0C7V8 631 aa6.71□□□□□ -1.34
RPS4XP3-201ENST00000398541 POTEMA6NI47 508 aa6.7□□□□□ -1.34
RPS4XP3-201ENST00000398541 POTEGQ6S5H5 508 aa6.7□□□□□ -1.34
RPS4XP3-201ENST00000398541 ST18O60284 1047 aa6.68□□□□□ -1.34
RPS4XP3-201ENST00000398541 TMEM92Q6UXU6 159 aa6.68□□□□□ -1.34
RPS4XP3-201ENST00000398541 PPP1R37O75864 691 aa6.67□□□□□ -1.34
RPS4XP3-201ENST00000398541 NKX1-1Q15270 411 aaPredicted RBP6.67□□□□□ -1.34
RPS4XP3-201ENST00000398541 DNAJC5Q9H3Z4 198 aa6.67□□□□□ -1.34
RPS4XP3-201ENST00000398541 HOXB3P14651 431 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms