RNA–Protein interactions for RNA: ENST00000394431.6

PSMD6-202, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best) BASIC

Gene PSMD6, Length 1,349 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-202ENST00000394431 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
PSMD6-202ENST00000394431 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
PSMD6-202ENST00000394431 CCDC61Q9Y6R9 512 aa12.11□□□□□ -0.47
PSMD6-202ENST00000394431 RASEFQ8IZ41 740 aa12.09□□□□□ -0.47
PSMD6-202ENST00000394431 POTEB2H3BUK9 544 aa12.05□□□□□ -0.48
PSMD6-202ENST00000394431 KIF12Q96FN5 646 aa12.03□□□□□ -0.48
PSMD6-202ENST00000394431 ATMINO43313 823 aaPredicted RBP12.02□□□□□ -0.49
PSMD6-202ENST00000394431 ASTLQ6HA08 431 aaPredicted RBP12.01□□□□□ -0.49
PSMD6-202ENST00000394431 MAP3K13O43283 966 aa12□□□□□ -0.49
PSMD6-202ENST00000394431 TRPC6Q9Y210 931 aa11.99□□□□□ -0.49
PSMD6-202ENST00000394431 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
PSMD6-202ENST00000394431 METRNQ9UJH8 293 aa11.97□□□□□ -0.49
PSMD6-202ENST00000394431 ATN1P54259 1190 aaPredicted RBP11.96□□□□□ -0.49
PSMD6-202ENST00000394431 NUBP1P53384 320 aa11.94□□□□□ -0.5
PSMD6-202ENST00000394431 SLC39A7Q92504 469 aa11.93□□□□□ -0.5
PSMD6-202ENST00000394431 ZBTB47Q9UFB7 747 aaPredicted RBP11.93□□□□□ -0.5
PSMD6-202ENST00000394431 BMP2KQ9NSY1 1161 aaPredicted RBP11.92□□□□□ -0.5
PSMD6-202ENST00000394431 C7P10643 843 aa11.9□□□□□ -0.5
PSMD6-202ENST00000394431 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
PSMD6-202ENST00000394431 PCDHB13Q9Y5F0 798 aa11.86□□□□□ -0.51
PSMD6-202ENST00000394431 TIE1P35590 1138 aa11.85□□□□□ -0.51
PSMD6-202ENST00000394431 FAM212AQ96EL1 285 aa11.85□□□□□ -0.51
PSMD6-202ENST00000394431 CCDC180Q9P1Z9 1646 aa11.84□□□□□ -0.51
PSMD6-202ENST00000394431 FBXO3Q9UK99 471 aa11.84□□□□□ -0.51
PSMD6-202ENST00000394431 TTLL13PA6NNM8 815 aa11.83□□□□□ -0.52
PSMD6-202ENST00000394431 POTEFA5A3E0 1075 aa11.81□□□□□ -0.52
PSMD6-202ENST00000394431 DCAF8Q5TAQ9 597 aa11.81□□□□□ -0.52
PSMD6-202ENST00000394431 IFNL1Q8IU54 200 aa11.81□□□□□ -0.52
PSMD6-202ENST00000394431 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
PSMD6-202ENST00000394431 PYGBP11216 843 aa11.76□□□□□ -0.53
PSMD6-202ENST00000394431 TRIM35Q9UPQ4 493 aa11.76□□□□□ -0.53
PSMD6-202ENST00000394431 KLHL34Q8N239 644 aa11.75□□□□□ -0.53
PSMD6-202ENST00000394431 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
PSMD6-202ENST00000394431 SEC24BO95487 1268 aa11.74□□□□□ -0.53
PSMD6-202ENST00000394431 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
PSMD6-202ENST00000394431 MAMSTRQ6ZN01 415 aa11.72□□□□□ -0.53
PSMD6-202ENST00000394431 TMEM106CQ9BVX2 250 aa11.72□□□□□ -0.53
PSMD6-202ENST00000394431 SCUBE2Q9NQ36 999 aa11.7□□□□□ -0.54
PSMD6-202ENST00000394431 PCDHB8Q9UN66 801 aa11.67□□□□□ -0.54
PSMD6-202ENST00000394431 POTEMA6NI47 508 aa11.64□□□□□ -0.55
PSMD6-202ENST00000394431 IER5LQ5T953 404 aa11.63□□□□□ -0.55
PSMD6-202ENST00000394431 DNAJC5Q9H3Z4 198 aa11.62□□□□□ -0.55
PSMD6-202ENST00000394431 PLSCR2Q9NRY7 297 aa11.62□□□□□ -0.55
PSMD6-202ENST00000394431 POTEGQ6S5H5 508 aa11.61□□□□□ -0.55
PSMD6-202ENST00000394431 FAM163AQ96GL9 167 aaPredicted RBP11.61□□□□□ -0.55
PSMD6-202ENST00000394431 GSE1Q14687 1217 aa11.6□□□□□ -0.55
PSMD6-202ENST00000394431 RB1CC1Q8TDY2 1594 aa11.59□□□□□ -0.55
PSMD6-202ENST00000394431 PLCG2P16885 1265 aa11.58□□□□□ -0.56
PSMD6-202ENST00000394431 LCE2DQ5TA82 110 aaPredicted RBP11.56□□□□□ -0.56
PSMD6-202ENST00000394431 IFNLR1Q8IU57 520 aaPredicted RBP11.56□□□□□ -0.56
PSMD6-202ENST00000394431 IRX5P78411 483 aaPredicted RBP11.55□□□□□ -0.56
PSMD6-202ENST00000394431 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
PSMD6-202ENST00000394431 ZNF467Q7Z7K2 595 aaPredicted RBP11.5□□□□□ -0.57
PSMD6-202ENST00000394431 SLAIN1Q8ND83 568 aa11.5□□□□□ -0.57
PSMD6-202ENST00000394431 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
PSMD6-202ENST00000394431 OCEL1Q9H607 264 aa11.5□□□□□ -0.57
PSMD6-202ENST00000394431 CHRM1P11229 460 aaPredicted RBP11.48□□□□□ -0.57
PSMD6-202ENST00000394431 PSEN1P49768 467 aa11.45□□□□□ -0.58
PSMD6-202ENST00000394431 GOLGA2Q08379 1002 aa11.44□□□□□ -0.58
PSMD6-202ENST00000394431 MKRN3Q13064 507 aaKnown RBP11.41□□□□□ -0.58
PSMD6-202ENST00000394431 PDCD7Q8N8D1 485 aaKnown RBP11.38□□□□□ -0.59
PSMD6-202ENST00000394431 NACADO15069 1562 aa11.37□□□□□ -0.59
PSMD6-202ENST00000394431 PDAP1Q13442 181 aaKnown RBP11.36□□□□□ -0.59
PSMD6-202ENST00000394431 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.36□□□□□ -0.591e-6■■■■□ 22.5
PSMD6-202ENST00000394431 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.36□□□□□ -0.59
PSMD6-202ENST00000394431 ST18O60284 1047 aa11.35□□□□□ -0.59
PSMD6-202ENST00000394431 PCDH10Q9P2E7 1040 aa11.35□□□□□ -0.59
PSMD6-202ENST00000394431 CABP2Q9NPB3 220 aa11.34□□□□□ -0.59
PSMD6-202ENST00000394431 CECR2Q9BXF3 1484 aa11.31□□□□□ -0.6
PSMD6-202ENST00000394431 DCAF8L2P0C7V8 631 aa11.31□□□□□ -0.6
PSMD6-202ENST00000394431 DPY19L2Q6NUT2 758 aa11.3□□□□□ -0.6
PSMD6-202ENST00000394431 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
PSMD6-202ENST00000394431 C3orf67Q6ZVT6 689 aa11.29□□□□□ -0.6
PSMD6-202ENST00000394431 CDAN1Q8IWY9 1227 aa11.28□□□□□ -0.6
PSMD6-202ENST00000394431 BICRAQ9NZM4 1560 aa11.27□□□□□ -0.61
PSMD6-202ENST00000394431 SNPHO15079 494 aa11.23□□□□□ -0.61
PSMD6-202ENST00000394431 ILDR1Q86SU0 546 aaPredicted RBP11.23□□□□□ -0.61
PSMD6-202ENST00000394431 UNC13AQ9UPW8 1703 aa11.22□□□□□ -0.61
PSMD6-202ENST00000394431 MARVELD3Q96A59 401 aa11.22□□□□□ -0.61
PSMD6-202ENST00000394431 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
PSMD6-202ENST00000394431 CC2D2AQ9P2K1 1620 aa11.2□□□□□ -0.62
PSMD6-202ENST00000394431 EFCAB3Q8N7B9 438 aa11.2□□□□□ -0.62
PSMD6-202ENST00000394431 G3V3G9 751 aa11.17□□□□□ -0.62
PSMD6-202ENST00000394431 RNF25Q96BH1 459 aaPredicted RBP11.17□□□□□ -0.62
PSMD6-202ENST00000394431 BOLA1Q9Y3E2 137 aa11.17□□□□□ -0.62
PSMD6-202ENST00000394431 TMEM121BQ9BXQ6 578 aaPredicted RBP11.15□□□□□ -0.62
PSMD6-202ENST00000394431 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
PSMD6-202ENST00000394431 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.12□□□□□ -0.63
PSMD6-202ENST00000394431 ZFP91Q96JP5 570 aaPredicted RBP11.12□□□□□ -0.63
PSMD6-202ENST00000394431 EMP3P54852 163 aa11.09□□□□□ -0.63
PSMD6-202ENST00000394431 VGFO15240 615 aaPredicted RBP11.08□□□□□ -0.64
PSMD6-202ENST00000394431 SHROOM4Q9ULL8 1493 aa11.05□□□□□ -0.64
PSMD6-202ENST00000394431 EIF4G1Q04637 1599 aaKnown RBP11.05□□□□□ -0.64
PSMD6-202ENST00000394431 FAM205CA6NFA0 338 aa11.05□□□□□ -0.64
PSMD6-202ENST00000394431 PHF8Q9UPP1 1060 aa11.05□□□□□ -0.64
PSMD6-202ENST00000394431 POTEB3A0JP26 581 aa11.04□□□□□ -0.64
PSMD6-202ENST00000394431 HOXB3P14651 431 aaPredicted RBP11.04□□□□□ -0.64
PSMD6-202ENST00000394431 POTEBQ6S5H4 581 aa11.04□□□□□ -0.64
PSMD6-202ENST00000394431 SOX12O15370 315 aa11.03□□□□□ -0.64
PSMD6-202ENST00000394431 MS4A4AQ96JQ5 239 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms