RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 RTL5Q5HYW3 569 aaPredicted RBP15.95■□□□□ 0.14
LAMB1-203ENST00000393560 PAXIP1Q6ZW49 1069 aaPredicted RBP15.95■□□□□ 0.14
LAMB1-203ENST00000393560 RSPH6AQ9H0K4 717 aa15.94■□□□□ 0.14
LAMB1-203ENST00000393560 BAZ1BQ9UIG0 1483 aaKnown RBP15.93■□□□□ 0.14
LAMB1-203ENST00000393560 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
LAMB1-203ENST00000393560 PEG3Q9GZU2 1588 aa15.9■□□□□ 0.14
LAMB1-203ENST00000393560 EIF4G1Q04637 1599 aaKnown RBP15.9■□□□□ 0.14
LAMB1-203ENST00000393560 DHX37Q8IY37 1157 aaKnown RBP15.89■□□□□ 0.13
LAMB1-203ENST00000393560 NOP58Q9Y2X3 529 aaKnown RBP15.85■□□□□ 0.13
LAMB1-203ENST00000393560 BRPF3Q9ULD4 1205 aa15.82■□□□□ 0.12
LAMB1-203ENST00000393560 PAK3O75914 559 aaPredicted RBP15.81■□□□□ 0.12
LAMB1-203ENST00000393560 TULP1O00294 542 aaPredicted RBP15.8■□□□□ 0.12
LAMB1-203ENST00000393560 CDK11AQ9UQ88 783 aaPredicted RBP15.77■□□□□ 0.12
LAMB1-203ENST00000393560 C11orf95C9JLR9 678 aaPredicted RBP15.77■□□□□ 0.11
LAMB1-203ENST00000393560 CHMP4AQ9BY43 222 aa15.76■□□□□ 0.11
LAMB1-203ENST00000393560 NAP1L2Q9ULW6 460 aaPredicted RBP15.74■□□□□ 0.11
LAMB1-203ENST00000393560 NCAPD3P42695 1498 aa15.72■□□□□ 0.11
LAMB1-203ENST00000393560 HSP90AA2PQ14568 343 aaPredicted RBP15.71■□□□□ 0.1
LAMB1-203ENST00000393560 CHMP4BQ9H444 224 aaKnown RBP15.71■□□□□ 0.1
LAMB1-203ENST00000393560 NAP1L5Q96NT1 182 aaPredicted RBP15.7■□□□□ 0.1
LAMB1-203ENST00000393560 SOGA1O94964 1423 aa15.7■□□□□ 0.1
LAMB1-203ENST00000393560 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
LAMB1-203ENST00000393560 HAP1P54257 671 aaPredicted RBP15.66■□□□□ 0.1
LAMB1-203ENST00000393560 HOMEZQ8IX15 550 aa15.66■□□□□ 0.1
LAMB1-203ENST00000393560 BBXQ8WY36 941 aaPredicted RBP15.66■□□□□ 0.1
LAMB1-203ENST00000393560 RSPH4AQ5TD94 716 aa15.65■□□□□ 0.1
LAMB1-203ENST00000393560 RUSC2Q8N2Y8 1516 aa15.65■□□□□ 0.1
LAMB1-203ENST00000393560 HMGXB3Q12766 1538 aa15.64■□□□□ 0.09
LAMB1-203ENST00000393560 BRD2P25440 801 aaKnown RBP15.64■□□□□ 0.09
LAMB1-203ENST00000393560 WASHC2CQ9Y4E1 1318 aa15.62■□□□□ 0.09
LAMB1-203ENST00000393560 WASHC2AQ641Q2 1341 aa15.61■□□□□ 0.09
LAMB1-203ENST00000393560 NEFMP07197 916 aa15.6■□□□□ 0.09
LAMB1-203ENST00000393560 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
LAMB1-203ENST00000393560 RRP9O43818 475 aaKnown RBP15.6■□□□□ 0.09
LAMB1-203ENST00000393560 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
LAMB1-203ENST00000393560 CC2D2AQ9P2K1 1620 aa15.59■□□□□ 0.09
LAMB1-203ENST00000393560 RGS3P49796 1198 aa15.57■□□□□ 0.08
LAMB1-203ENST00000393560 SAMD1Q6SPF0 538 aaPredicted RBP15.56■□□□□ 0.08
LAMB1-203ENST00000393560 UBTFP17480 764 aaKnown RBP15.55■□□□□ 0.08
LAMB1-203ENST00000393560 ZNF326Q5BKZ1 582 aaKnown RBP15.54■□□□□ 0.08
LAMB1-203ENST00000393560 GTF2E1P29083 439 aaPredicted RBP15.53■□□□□ 0.08
LAMB1-203ENST00000393560 FAM43AQ8N2R8 423 aa15.53■□□□□ 0.08
LAMB1-203ENST00000393560 PRDM4Q9UKN5 801 aa15.52■□□□□ 0.08
LAMB1-203ENST00000393560 KCNH8Q96L42 1107 aa15.51■□□□□ 0.07
LAMB1-203ENST00000393560 HSP90AA1P07900 732 aaKnown RBP15.5■□□□□ 0.07
LAMB1-203ENST00000393560 IRX6P78412 446 aaPredicted RBP15.49■□□□□ 0.07
LAMB1-203ENST00000393560 ZBTB47Q9UFB7 747 aaPredicted RBP15.49■□□□□ 0.07
LAMB1-203ENST00000393560 CFTRP13569 1480 aa15.48■□□□□ 0.07
LAMB1-203ENST00000393560 IPO4Q8TEX9 1081 aaKnown RBP15.48■□□□□ 0.07
LAMB1-203ENST00000393560 DNAJC5BQ9UF47 199 aa15.47■□□□□ 0.07
LAMB1-203ENST00000393560 ZFP91Q96JP5 570 aaPredicted RBP15.45■□□□□ 0.06
LAMB1-203ENST00000393560 CANXP27824 592 aaKnown RBP15.44■□□□□ 0.06
LAMB1-203ENST00000393560 FOXD1Q16676 465 aa15.44■□□□□ 0.06
LAMB1-203ENST00000393560 NPM2Q86SE8 214 aaKnown RBP15.44■□□□□ 0.06
LAMB1-203ENST00000393560 STAC3Q96MF2 364 aa15.44■□□□□ 0.06
LAMB1-203ENST00000393560 EEA1Q15075 1411 aa15.43■□□□□ 0.06
LAMB1-203ENST00000393560 CADPSQ9ULU8 1353 aa15.43■□□□□ 0.06
LAMB1-203ENST00000393560 IPO9Q96P70 1041 aaKnown RBP15.43■□□□□ 0.06
LAMB1-203ENST00000393560 TOP2BQ02880 1626 aa15.41■□□□□ 0.06
LAMB1-203ENST00000393560 CUX1P39880 1505 aa15.4■□□□□ 0.06
LAMB1-203ENST00000393560 LAS1LQ9Y4W2 734 aaKnown RBP15.4■□□□□ 0.06
LAMB1-203ENST00000393560 USP35Q9P2H5 1018 aa15.39■□□□□ 0.06
LAMB1-203ENST00000393560 ANP32AP39687 249 aaKnown RBP15.39■□□□□ 0.05
LAMB1-203ENST00000393560 CALD1Q05682 793 aaKnown RBP15.39■□□□□ 0.05
LAMB1-203ENST00000393560 GSE1Q14687 1217 aa15.39■□□□□ 0.05
LAMB1-203ENST00000393560 CEP162Q5TB80 1403 aa15.39■□□□□ 0.05
LAMB1-203ENST00000393560 PLCD3Q8N3E9 789 aa15.37■□□□□ 0.05
LAMB1-203ENST00000393560 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
LAMB1-203ENST00000393560 GOLGA3Q08378 1498 aa15.36■□□□□ 0.05
LAMB1-203ENST00000393560 NESP48681 1621 aa15.35■□□□□ 0.05
LAMB1-203ENST00000393560 C14orf37Q86TY3 774 aa15.35■□□□□ 0.05
LAMB1-203ENST00000393560 CNGB1Q14028 1251 aaPredicted RBP15.35■□□□□ 0.05
LAMB1-203ENST00000393560 SECISBP2LQ93073 1101 aaKnown RBP15.33■□□□□ 0.04
LAMB1-203ENST00000393560 BIVM-ERCC5R4GMW8 1640 aa15.33■□□□□ 0.04
LAMB1-203ENST00000393560 RAPGEF2Q9Y4G8 1499 aa15.31■□□□□ 0.04
LAMB1-203ENST00000393560 CEP164Q9UPV0 1460 aa15.31■□□□□ 0.04
LAMB1-203ENST00000393560 RRAGDQ9NQL2 400 aaPredicted RBP15.3■□□□□ 0.04
LAMB1-203ENST00000393560 FRAT1Q92837 279 aaPredicted RBP15.3■□□□□ 0.04
LAMB1-203ENST00000393560 FTSJ3Q8IY81 847 aaKnown RBP15.29■□□□□ 0.04
LAMB1-203ENST00000393560 ARID4BQ4LE39 1312 aaPredicted RBP15.28■□□□□ 0.04
LAMB1-203ENST00000393560 FANCD2Q9BXW9 1451 aa15.28■□□□□ 0.04
LAMB1-203ENST00000393560 TRIM52Q96A61 297 aa15.27■□□□□ 0.04
LAMB1-203ENST00000393560 DCAF11Q8TEB1 546 aa15.26■□□□□ 0.03
LAMB1-203ENST00000393560 KIF27Q86VH2 1401 aa15.24■□□□□ 0.03
LAMB1-203ENST00000393560 KIF21BO75037 1637 aa15.23■□□□□ 0.03
LAMB1-203ENST00000393560 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.23■□□□□ 0.03
LAMB1-203ENST00000393560 TEX2Q8IWB9 1127 aa15.23■□□□□ 0.03
LAMB1-203ENST00000393560 ZNF830Q96NB3 372 aaPredicted RBP15.23■□□□□ 0.03
LAMB1-203ENST00000393560 PRDM2Q13029 1718 aa15.23■□□□□ 0.03
LAMB1-203ENST00000393560 AMER1Q5JTC6 1135 aaPredicted RBP15.23■□□□□ 0.03
LAMB1-203ENST00000393560 PNNQ9H307 717 aaKnown RBP15.22■□□□□ 0.03
LAMB1-203ENST00000393560 CUX2O14529 1486 aa15.22■□□□□ 0.03
LAMB1-203ENST00000393560 FGD5Q6ZNL6 1462 aa15.22■□□□□ 0.03
LAMB1-203ENST00000393560 VGLL3A8MV65 326 aa15.21■□□□□ 0.03
LAMB1-203ENST00000393560 CLIP1P30622 1438 aa15.21■□□□□ 0.03
LAMB1-203ENST00000393560 PPM1GO15355 546 aaPredicted RBP15.21■□□□□ 0.02
LAMB1-203ENST00000393560 ZHX1Q9UKY1 873 aaPredicted RBP15.2■□□□□ 0.02
LAMB1-203ENST00000393560 TAOK2Q9UL54 1235 aa15.2■□□□□ 0.02
LAMB1-203ENST00000393560 PDCL3Q9H2J4 239 aa15.19■□□□□ 0.02
LAMB1-203ENST00000393560 CENPJQ9HC77 1338 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms