RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 NACADO15069 1562 aa17.61■□□□□ 0.41
PCNX4-202ENST00000391611 BAZ1AQ9NRL2 1556 aaPredicted RBP17.6■□□□□ 0.41
PCNX4-202ENST00000391611 CANXP27824 592 aaKnown RBP17.57■□□□□ 0.4
PCNX4-202ENST00000391611 CCNB3Q8WWL7 1395 aa17.57■□□□□ 0.4
PCNX4-202ENST00000391611 BAZ1BQ9UIG0 1483 aaKnown RBP17.54■□□□□ 0.4
PCNX4-202ENST00000391611 KIF27Q86VH2 1401 aa17.54■□□□□ 0.4
PCNX4-202ENST00000391611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.4
PCNX4-202ENST00000391611 VPS8Q8N3P4 1428 aa17.54■□□□□ 0.4
PCNX4-202ENST00000391611 KCNH8Q96L42 1107 aa17.52■□□□□ 0.4
PCNX4-202ENST00000391611 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
PCNX4-202ENST00000391611 RUSC2Q8N2Y8 1516 aa17.51■□□□□ 0.39
PCNX4-202ENST00000391611 WIZO95785 1651 aa17.49■□□□□ 0.39
PCNX4-202ENST00000391611 B4GALNT3Q6L9W6 998 aa17.46■□□□□ 0.39
PCNX4-202ENST00000391611 TSHZ2Q9NRE2 1034 aa17.43■□□□□ 0.38
PCNX4-202ENST00000391611 RBM19Q9Y4C8 960 aaKnown RBP17.43■□□□□ 0.38
PCNX4-202ENST00000391611 TSPY4P0CV99 314 aa17.42■□□□□ 0.38
PCNX4-202ENST00000391611 TSPY10P0CW01 314 aa17.42■□□□□ 0.38
PCNX4-202ENST00000391611 RGL3Q3MIN7 710 aa17.42■□□□□ 0.38
PCNX4-202ENST00000391611 CHGAP10645 457 aaKnown RBP17.4■□□□□ 0.38
PCNX4-202ENST00000391611 RAB3GAP2Q9H2M9 1393 aa17.39■□□□□ 0.37
PCNX4-202ENST00000391611 EIF5BO60841 1220 aaKnown RBP17.39■□□□□ 0.37
PCNX4-202ENST00000391611 FOXD1Q16676 465 aa17.37■□□□□ 0.37
PCNX4-202ENST00000391611 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
PCNX4-202ENST00000391611 PPP4R2Q9NY27 417 aa17.35■□□□□ 0.37
PCNX4-202ENST00000391611 SETD5Q9C0A6 1442 aa17.35■□□□□ 0.37
PCNX4-202ENST00000391611 RAPGEF2Q9Y4G8 1499 aa17.33■□□□□ 0.36
PCNX4-202ENST00000391611 CUX2O14529 1486 aa17.33■□□□□ 0.36
PCNX4-202ENST00000391611 ARXQ96QS3 562 aa17.32■□□□□ 0.36
PCNX4-202ENST00000391611 HSPA5P11021 654 aaKnown RBP17.32■□□□□ 0.36
PCNX4-202ENST00000391611 DHX57Q6P158 1386 aaKnown RBP17.31■□□□□ 0.36
PCNX4-202ENST00000391611 PPP1R15AO75807 674 aaPredicted RBP17.31■□□□□ 0.36
PCNX4-202ENST00000391611 CCER2I3L3R5 266 aa17.31■□□□□ 0.36
PCNX4-202ENST00000391611 WDR43Q15061 677 aaKnown RBP eCLIP17.3■□□□□ 0.36
PCNX4-202ENST00000391611 CHMP7Q8WUX9 453 aaPredicted RBP17.3■□□□□ 0.36
PCNX4-202ENST00000391611 CARD11Q9BXL7 1154 aa17.29■□□□□ 0.36
PCNX4-202ENST00000391611 CFDP1Q9UEE9 299 aaPredicted RBP17.29■□□□□ 0.36
PCNX4-202ENST00000391611 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
PCNX4-202ENST00000391611 TIMELESSQ9UNS1 1208 aa17.28■□□□□ 0.36
PCNX4-202ENST00000391611 SLC24A1O60721 1099 aa17.23■□□□□ 0.35
PCNX4-202ENST00000391611 LAS1LQ9Y4W2 734 aaKnown RBP17.23■□□□□ 0.35
PCNX4-202ENST00000391611 FHAD1B1AJZ9 1412 aa17.22■□□□□ 0.35
PCNX4-202ENST00000391611 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
PCNX4-202ENST00000391611 PLEKHD1A6NEE1 506 aa17.21■□□□□ 0.35
PCNX4-202ENST00000391611 NEFMP07197 916 aa17.21■□□□□ 0.34
PCNX4-202ENST00000391611 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.2■□□□□ 0.34
PCNX4-202ENST00000391611 UPF2Q9HAU5 1272 aaKnown RBP17.18■□□□□ 0.34
PCNX4-202ENST00000391611 NOP58Q9Y2X3 529 aaKnown RBP17.18■□□□□ 0.34
PCNX4-202ENST00000391611 RTN4Q9NQC3 1192 aaKnown RBP17.17■□□□□ 0.34
PCNX4-202ENST00000391611 CC2D1BQ5T0F9 858 aaKnown RBP17.16■□□□□ 0.34
PCNX4-202ENST00000391611 HSP90AA1P07900 732 aaKnown RBP17.15■□□□□ 0.34
PCNX4-202ENST00000391611 DCAF11Q8TEB1 546 aa17.15■□□□□ 0.34
PCNX4-202ENST00000391611 L3MBTL2Q969R5 705 aa17.14■□□□□ 0.33
PCNX4-202ENST00000391611 RGS3P49796 1198 aa17.13■□□□□ 0.33
PCNX4-202ENST00000391611 MPHOSPH9Q99550 1183 aa17.13■□□□□ 0.33
PCNX4-202ENST00000391611 NEUROD2Q15784 382 aa17.12■□□□□ 0.33
PCNX4-202ENST00000391611 ARHGAP35Q9NRY4 1499 aa17.12■□□□□ 0.33
PCNX4-202ENST00000391611 TDRD9Q8NDG6 1382 aaKnown RBP17.09■□□□□ 0.33
PCNX4-202ENST00000391611 DEKP35659 375 aaKnown RBP17.09■□□□□ 0.33
PCNX4-202ENST00000391611 KNSTRNQ9Y448 316 aa17.09■□□□□ 0.33
PCNX4-202ENST00000391611 FHOD3Q2V2M9 1422 aa17.08■□□□□ 0.32
PCNX4-202ENST00000391611 PKD2Q13563 968 aa17.08■□□□□ 0.32
PCNX4-202ENST00000391611 TNNT2P45379 298 aaPredicted RBP17.04■□□□□ 0.32
PCNX4-202ENST00000391611 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
PCNX4-202ENST00000391611 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.32
PCNX4-202ENST00000391611 DDRGK1Q96HY6 314 aa17.02■□□□□ 0.31
PCNX4-202ENST00000391611 ATAD2BQ9ULI0 1458 aa17■□□□□ 0.31
PCNX4-202ENST00000391611 FRAT1Q92837 279 aaPredicted RBP17■□□□□ 0.31
PCNX4-202ENST00000391611 SMARCA4P51532 1647 aa17■□□□□ 0.31
PCNX4-202ENST00000391611 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
PCNX4-202ENST00000391611 SMARCA2P51531 1590 aa16.96■□□□□ 0.31
PCNX4-202ENST00000391611 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
PCNX4-202ENST00000391611 PRKRIP1Q9H875 184 aaPredicted RBP16.94■□□□□ 0.3
PCNX4-202ENST00000391611 RCAN3Q9UKA8 241 aa16.94■□□□□ 0.3
PCNX4-202ENST00000391611 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
PCNX4-202ENST00000391611 ERICH6BQ5W0A0 696 aa16.93■□□□□ 0.3
PCNX4-202ENST00000391611 ANP32BQ92688 251 aaKnown RBP16.93■□□□□ 0.3
PCNX4-202ENST00000391611 NPM1P06748 294 aaKnown RBP eCLIP16.92■□□□□ 0.3
PCNX4-202ENST00000391611 NUDCQ9Y266 331 aa16.92■□□□□ 0.3
PCNX4-202ENST00000391611 BECN1Q14457 450 aa16.91■□□□□ 0.3
PCNX4-202ENST00000391611 KIF21BO75037 1637 aa16.9■□□□□ 0.3
PCNX4-202ENST00000391611 TMF1P82094 1093 aa16.89■□□□□ 0.29
PCNX4-202ENST00000391611 CDCA8Q53HL2 280 aa16.89■□□□□ 0.29
PCNX4-202ENST00000391611 PHLDB1Q86UU1 1377 aa16.89■□□□□ 0.29
PCNX4-202ENST00000391611 NUP155O75694 1391 aa16.89■□□□□ 0.29
PCNX4-202ENST00000391611 IGF1RP08069 1367 aa16.88■□□□□ 0.29
PCNX4-202ENST00000391611 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
PCNX4-202ENST00000391611 ST20-MTHFSA0A0A6YYL1 179 aa16.85■□□□□ 0.29
PCNX4-202ENST00000391611 FTSJ3Q8IY81 847 aaKnown RBP16.84■□□□□ 0.29
PCNX4-202ENST00000391611 IPO9Q96P70 1041 aaKnown RBP16.84■□□□□ 0.29
PCNX4-202ENST00000391611 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.28
PCNX4-202ENST00000391611 SPRYD3Q8NCJ5 442 aa16.83■□□□□ 0.28
PCNX4-202ENST00000391611 ARAP1Q96P48 1450 aa16.83■□□□□ 0.28
PCNX4-202ENST00000391611 PLIN1O60240 522 aa16.82■□□□□ 0.28
PCNX4-202ENST00000391611 CFAP53Q96M91 514 aa16.82■□□□□ 0.28
PCNX4-202ENST00000391611 KTN1Q86UP2 1357 aaKnown RBP16.81■□□□□ 0.28
PCNX4-202ENST00000391611 HNRNPMP52272 730 aaKnown RBP eCLIP16.81■□□□□ 0.28
PCNX4-202ENST00000391611 ROCK2O75116 1388 aaKnown RBP16.8■□□□□ 0.28
PCNX4-202ENST00000391611 U2SURPO15042 1029 aaKnown RBP16.8■□□□□ 0.28
PCNX4-202ENST00000391611 TCERG1O14776 1098 aaKnown RBP16.79■□□□□ 0.28
PCNX4-202ENST00000391611 RALBP1Q15311 655 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms